RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 GLMPQ8WWB7 406 aa14.11□□□□□ -0.15
MCF2L-230ENST00000491028 SLC25A22Q9H936 323 aa14.11□□□□□ -0.15
MCF2L-230ENST00000491028 MLXQ9UH92 298 aa14.11□□□□□ -0.15
MCF2L-230ENST00000491028 IGHV3-66A0A0C4DH42 116 aa14.1□□□□□ -0.15
MCF2L-230ENST00000491028 CTXND1A0A1B0GTU2 59 aa14.1□□□□□ -0.15
MCF2L-230ENST00000491028 RPL7P18124 248 aaKnown RBP14.1□□□□□ -0.15
MCF2L-230ENST00000491028 KHDC3LQ587J8 217 aa14.1□□□□□ -0.15
MCF2L-230ENST00000491028 SPATA31B1PQ5VZV4 182 aa14.1□□□□□ -0.15
MCF2L-230ENST00000491028 LEMD1Q68G75 181 aa14.1□□□□□ -0.15
MCF2L-230ENST00000491028 OR8I2Q8N0Y5 310 aa14.1□□□□□ -0.15
MCF2L-230ENST00000491028 STXBP6Q8NFX7 210 aa14.1□□□□□ -0.15
MCF2L-230ENST00000491028 RNF141Q8WVD5 230 aa14.1□□□□□ -0.15
MCF2L-230ENST00000491028 HELTA6NFD8 242 aa14.09□□□□□ -0.15
MCF2L-230ENST00000491028 IFNA7P01567 189 aa14.09□□□□□ -0.15
MCF2L-230ENST00000491028 PRR31Q5SQ13 230 aa14.09□□□□□ -0.15
MCF2L-230ENST00000491028 BPIFA4PQ86YQ2 179 aa14.09□□□□□ -0.15
MCF2L-230ENST00000491028 OR2K2Q8NGT1 345 aa14.09□□□□□ -0.15
MCF2L-230ENST00000491028 FAM213BQ8TBF2 198 aa14.09□□□□□ -0.15
MCF2L-230ENST00000491028 RAB24Q969Q5 203 aa14.09□□□□□ -0.15
MCF2L-230ENST00000491028 GPR61Q9BZJ8 451 aa14.09□□□□□ -0.15
MCF2L-230ENST00000491028 TMEM14CQ9P0S9 112 aa14.09□□□□□ -0.15
MCF2L-230ENST00000491028 ANK2Q01484 3957 aa14.09□□□□□ -0.15
MCF2L-230ENST00000491028 GALR1P47211 349 aa14.08□□□□□ -0.16
MCF2L-230ENST00000491028 ZNF726P1Q15940 193 aa14.08□□□□□ -0.16
MCF2L-230ENST00000491028 DEFB114Q30KQ6 69 aa14.08□□□□□ -0.16
MCF2L-230ENST00000491028 FAM74A1Q5RGS3 127 aa14.08□□□□□ -0.16
MCF2L-230ENST00000491028 SIGLEC15Q6ZMC9 328 aa14.08□□□□□ -0.16
MCF2L-230ENST00000491028 PQLC2Q6ZP29 291 aa14.08□□□□□ -0.16
MCF2L-230ENST00000491028 TCF24Q7RTU0 167 aa14.08□□□□□ -0.16
MCF2L-230ENST00000491028 ZNF680Q8NEM1 530 aa14.08□□□□□ -0.16
MCF2L-230ENST00000491028 FAM167A-AS1Q96KT0 104 aa14.08□□□□□ -0.16
MCF2L-230ENST00000491028 SLC25A2Q9BXI2 301 aa14.08□□□□□ -0.16
MCF2L-230ENST00000491028 TRAV5A0A0B4J249 113 aa14.07□□□□□ -0.16
MCF2L-230ENST00000491028 TRAV25A0A0B4J276 109 aa14.07□□□□□ -0.16
MCF2L-230ENST00000491028 IGLV1-51P01701 117 aa14.07□□□□□ -0.16
MCF2L-230ENST00000491028 STAG3L2P0CL84 134 aa14.07□□□□□ -0.16
MCF2L-230ENST00000491028 STAG3L3P0CL85 134 aa14.07□□□□□ -0.16
MCF2L-230ENST00000491028 FAM90A2PQ658T7 463 aa14.07□□□□□ -0.16
MCF2L-230ENST00000491028 MRPS12O15235 138 aaKnown RBP14.06□□□□□ -0.16
MCF2L-230ENST00000491028 OR7C2O60412 319 aa14.06□□□□□ -0.16
MCF2L-230ENST00000491028 GP9P14770 177 aa14.06□□□□□ -0.16
MCF2L-230ENST00000491028 FHITP49789 147 aa14.06□□□□□ -0.16
MCF2L-230ENST00000491028 SSX7Q7RTT5 188 aa14.06□□□□□ -0.16
MCF2L-230ENST00000491028 LRRC20Q8TCA0 184 aa14.06□□□□□ -0.16
MCF2L-230ENST00000491028 OR51M1Q9H341 326 aa14.06□□□□□ -0.16
MCF2L-230ENST00000491028 UBQLN2Q9UHD9 624 aa14.06□□□□□ -0.16
MCF2L-230ENST00000491028 VWFP04275 2813 aa14.06□□□□□ -0.16
MCF2L-230ENST00000491028 A0A087X0K7 114 aa14.05□□□□□ -0.16
MCF2L-230ENST00000491028 MAP1LC3B2A6NCE7 125 aa14.05□□□□□ -0.16
MCF2L-230ENST00000491028 WIPF1O43516 503 aa14.05□□□□□ -0.16
MCF2L-230ENST00000491028 CXorf1O96002 111 aa14.05□□□□□ -0.16
MCF2L-230ENST00000491028 ATF4P18848 351 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-230ENST00000491028 MEOX2P50222 304 aa14.05□□□□□ -0.16
MCF2L-230ENST00000491028 CD300EQ496F6 205 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-230ENST00000491028 MBD3L1Q8WWY6 194 aa14.05□□□□□ -0.16
MCF2L-230ENST00000491028 SAT2Q96F10 170 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-230ENST00000491028 PAXXQ9BUH6 204 aa14.05□□□□□ -0.16
MCF2L-230ENST00000491028 MAP1LC3BQ9GZQ8 125 aa14.05□□□□□ -0.16
MCF2L-230ENST00000491028 ZNF705EA8MWA4 302 aaPredicted RBP14.04□□□□□ -0.16
MCF2L-230ENST00000491028 TSPAN4O14817 238 aa14.04□□□□□ -0.16
MCF2L-230ENST00000491028 HMGB3O15347 200 aaKnown RBP14.04□□□□□ -0.16
MCF2L-230ENST00000491028 H2AFB1P0C5Y9 115 aa14.04□□□□□ -0.16
MCF2L-230ENST00000491028 ARL14EPLP0DKL9 152 aa14.04□□□□□ -0.16
MCF2L-230ENST00000491028 IGLC2P0DOY2 106 aa14.04□□□□□ -0.16
MCF2L-230ENST00000491028 IGLL1P15814 213 aa14.04□□□□□ -0.16
MCF2L-230ENST00000491028 BLOC1S1P78537 153 aa14.04□□□□□ -0.16
MCF2L-230ENST00000491028 LCN12Q6JVE5 192 aa14.04□□□□□ -0.16
MCF2L-230ENST00000491028 RBPMS2Q6ZRY4 209 aaKnown RBP14.04□□□□□ -0.16
MCF2L-230ENST00000491028 ZNF767PQ75MW2 155 aa14.04□□□□□ -0.16
MCF2L-230ENST00000491028 TMEM61Q8N0U2 210 aa14.04□□□□□ -0.16
MCF2L-230ENST00000491028 ZNF503Q96F45 646 aa14.04□□□□□ -0.16
MCF2L-230ENST00000491028 TEX46H3BTG2 121 aa14.03□□□□□ -0.16
MCF2L-230ENST00000491028 EIF3GO75821 320 aaKnown RBP eCLIP14.03□□□□□ -0.16
MCF2L-230ENST00000491028 PYYP10082 97 aa14.03□□□□□ -0.16
MCF2L-230ENST00000491028 HIST1H1EP10412 219 aaKnown RBP14.03□□□□□ -0.16
MCF2L-230ENST00000491028 RPL11P62913 178 aaKnown RBP14.03□□□□□ -0.16
MCF2L-230ENST00000491028 UBE2L3P68036 154 aaKnown RBP14.03□□□□□ -0.16
MCF2L-230ENST00000491028 PAFAH1B2P68402 229 aa14.03□□□□□ -0.16
MCF2L-230ENST00000491028 GUK1Q16774 197 aa14.03□□□□□ -0.16
MCF2L-230ENST00000491028 SAMD13Q5VXD3 122 aa14.03□□□□□ -0.16
MCF2L-230ENST00000491028 LCN15Q6UWW0 184 aa14.03□□□□□ -0.16
MCF2L-230ENST00000491028 HRH4Q9H3N8 390 aa14.03□□□□□ -0.16
MCF2L-230ENST00000491028 NRN1Q9NPD7 142 aa14.03□□□□□ -0.16
MCF2L-230ENST00000491028 SMAD5-AS1Q9Y6J3 95 aa14.03□□□□□ -0.16
MCF2L-230ENST00000491028 TRAV2A0A0B4J234 112 aa14.02□□□□□ -0.17
MCF2L-230ENST00000491028 ZNF785A8K8V0 405 aa14.02□□□□□ -0.17
MCF2L-230ENST00000491028 HBE1P02100 147 aa14.02□□□□□ -0.17
MCF2L-230ENST00000491028 IFITM2Q01629 132 aa14.02□□□□□ -0.17
MCF2L-230ENST00000491028 SFT2D1Q8WV19 159 aa14.02□□□□□ -0.17
MCF2L-230ENST00000491028 FXYD5Q96DB9 178 aa14.02□□□□□ -0.17
MCF2L-230ENST00000491028 SPAG8Q99932 426 aaPredicted RBP14.02□□□□□ -0.17
MCF2L-230ENST00000491028 SELENOKQ9Y6D0 94 aa14.02□□□□□ -0.17
MCF2L-230ENST00000491028 TRAV1-1A0A0B4J248 108 aa14.01□□□□□ -0.17
MCF2L-230ENST00000491028 ZNF253O75346 499 aa14.01□□□□□ -0.17
MCF2L-230ENST00000491028 GCHFRP30047 84 aa14.01□□□□□ -0.17
MCF2L-230ENST00000491028 PDE6HQ13956 83 aa14.01□□□□□ -0.17
MCF2L-230ENST00000491028 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.01□□□□□ -0.17
MCF2L-230ENST00000491028 MS4A6AQ9H2W1 248 aa14.01□□□□□ -0.17
MCF2L-230ENST00000491028 TMEM167BQ9NRX6 74 aa14.01□□□□□ -0.17
MCF2L-230ENST00000491028 OR10J4P0C629 311 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms