RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 BAP18Q8IXM2 172 aa11.14□□□□□ -0.63
PLOD3-216ENST00000489927 RNF182Q8N6D2 247 aa11.14□□□□□ -0.63
PLOD3-216ENST00000489927 OR1B1Q8NGR6 318 aa11.14□□□□□ -0.63
PLOD3-216ENST00000489927 ZNRF2Q8NHG8 242 aa11.14□□□□□ -0.63
PLOD3-216ENST00000489927 DUXBA0A1W2PPF3 345 aa11.13□□□□□ -0.63
PLOD3-216ENST00000489927 PLAC8L1A1L4L8 177 aa11.13□□□□□ -0.63
PLOD3-216ENST00000489927 F5H768 121 aa11.13□□□□□ -0.63
PLOD3-216ENST00000489927 CDK2AP2O75956 126 aa11.13□□□□□ -0.63
PLOD3-216ENST00000489927 NUDT3O95989 172 aa11.13□□□□□ -0.63
PLOD3-216ENST00000489927 AZU1P20160 251 aa11.13□□□□□ -0.63
PLOD3-216ENST00000489927 TSPOP30536 169 aa11.13□□□□□ -0.63
PLOD3-216ENST00000489927 GPR141Q7Z602 305 aa11.13□□□□□ -0.63
PLOD3-216ENST00000489927 TMED4Q7Z7H5 227 aa11.13□□□□□ -0.63
PLOD3-216ENST00000489927 C6orf223Q8N319 242 aa11.13□□□□□ -0.63
PLOD3-216ENST00000489927 BPIFCQ8NFQ6 507 aa11.13□□□□□ -0.63
PLOD3-216ENST00000489927 GPR82Q96P67 336 aa11.13□□□□□ -0.63
PLOD3-216ENST00000489927 RSL24D1Q9UHA3 163 aaKnown RBP11.13□□□□□ -0.63
PLOD3-216ENST00000489927 DNAH5Q8TE73 4624 aa11.13□□□□□ -0.63
PLOD3-216ENST00000489927 APOBP04114 4563 aaKnown RBP11.13□□□□□ -0.63
PLOD3-216ENST00000489927 TRAV12-2A0A075B6T6 113 aa11.12□□□□□ -0.63
PLOD3-216ENST00000489927 PIGBOS1A0A0B4J2F0 54 aa11.12□□□□□ -0.63
PLOD3-216ENST00000489927 WRBO00258 174 aa11.12□□□□□ -0.63
PLOD3-216ENST00000489927 B2MP61769 119 aa11.12□□□□□ -0.63
PLOD3-216ENST00000489927 FGL1Q08830 312 aa11.12□□□□□ -0.63
PLOD3-216ENST00000489927 TMEM128Q5BJH2 165 aa11.12□□□□□ -0.63
PLOD3-216ENST00000489927 LRTM2Q8N967 370 aa11.12□□□□□ -0.63
PLOD3-216ENST00000489927 DYNC2LI1Q8TCX1 351 aa11.12□□□□□ -0.63
PLOD3-216ENST00000489927 CIB3Q96Q77 187 aaPredicted RBP11.12□□□□□ -0.63
PLOD3-216ENST00000489927 TMEM147Q9BVK8 224 aa11.12□□□□□ -0.63
PLOD3-216ENST00000489927 SLC25A39Q9BZJ4 359 aaPredicted RBP11.12□□□□□ -0.63
PLOD3-216ENST00000489927 CCDC59Q9P031 241 aaKnown RBP11.12□□□□□ -0.63
PLOD3-216ENST00000489927 SYNGR2O43760 224 aa11.11□□□□□ -0.63
PLOD3-216ENST00000489927 MED6O75586 246 aa11.11□□□□□ -0.63
PLOD3-216ENST00000489927 SLC25A6P12236 298 aa11.11□□□□□ -0.63
PLOD3-216ENST00000489927 VAMP1P23763 118 aa11.11□□□□□ -0.63
PLOD3-216ENST00000489927 RPP30P78346 268 aaKnown RBP11.11□□□□□ -0.63
PLOD3-216ENST00000489927 AKR1C1Q04828 323 aa11.11□□□□□ -0.63
PLOD3-216ENST00000489927 MAPKAPK5-AS1Q8N8E1 139 aa11.11□□□□□ -0.63
PLOD3-216ENST00000489927 SOSTQ9BQB4 213 aa11.11□□□□□ -0.63
PLOD3-216ENST00000489927 LINC00588Q9Y4M8 146 aa11.11□□□□□ -0.63
PLOD3-216ENST00000489927 H3BP45 60 aa11.1□□□□□ -0.63
PLOD3-216ENST00000489927 BOLA2-SMG1P6H3BVE0 249 aa11.1□□□□□ -0.63
PLOD3-216ENST00000489927 ATP5G1P05496 136 aa11.1□□□□□ -0.63
PLOD3-216ENST00000489927 ATP5G3P48201 142 aa11.1□□□□□ -0.63
PLOD3-216ENST00000489927 CCL18P55774 89 aa11.1□□□□□ -0.63
PLOD3-216ENST00000489927 SPANXN5Q5MJ07 72 aa11.1□□□□□ -0.63
PLOD3-216ENST00000489927 ACOT7LQ6ZUV0 252 aa11.1□□□□□ -0.63
PLOD3-216ENST00000489927 ZNF738Q8NE65 137 aa11.1□□□□□ -0.63
PLOD3-216ENST00000489927 MRPS26Q9BYN8 205 aaKnown RBP11.1□□□□□ -0.63
PLOD3-216ENST00000489927 FABP12A6NFH5 140 aa11.09□□□□□ -0.63
PLOD3-216ENST00000489927 CBY3A6NI87 242 aa11.09□□□□□ -0.63
PLOD3-216ENST00000489927 H3BRN7 92 aa11.09□□□□□ -0.63
PLOD3-216ENST00000489927 S100A7P31151 101 aa11.09□□□□□ -0.63
PLOD3-216ENST00000489927 TNFSF8P32971 234 aa11.09□□□□□ -0.63
PLOD3-216ENST00000489927 RNF141Q8WVD5 230 aa11.09□□□□□ -0.63
PLOD3-216ENST00000489927 LINC01587Q99440 93 aa11.09□□□□□ -0.63
PLOD3-216ENST00000489927 SHANK2-AS3Q9BTD1 123 aa11.09□□□□□ -0.63
PLOD3-216ENST00000489927 PRB4P10163 310 aaPredicted RBP11.08□□□□□ -0.64
PLOD3-216ENST00000489927 HTN1P15515 57 aa11.08□□□□□ -0.64
PLOD3-216ENST00000489927 FAUP35544 74 aaKnown RBP11.08□□□□□ -0.64
PLOD3-216ENST00000489927 RHOBP62745 196 aa11.08□□□□□ -0.64
PLOD3-216ENST00000489927 HIST1H1AQ02539 215 aaPredicted RBP11.08□□□□□ -0.64
PLOD3-216ENST00000489927 OR8A1Q8NGG7 326 aa11.08□□□□□ -0.64
PLOD3-216ENST00000489927 RAB2BQ8WUD1 216 aa11.08□□□□□ -0.64
PLOD3-216ENST00000489927 SLIRPQ9GZT3 109 aaKnown RBP11.08□□□□□ -0.64
PLOD3-216ENST00000489927 HIGD1AQ9Y241 93 aa11.08□□□□□ -0.64
PLOD3-216ENST00000489927 IL5P05113 134 aa11.07□□□□□ -0.64
PLOD3-216ENST00000489927 HOXB5P09067 269 aa11.07□□□□□ -0.64
PLOD3-216ENST00000489927 RPL7P18124 248 aaKnown RBP11.07□□□□□ -0.64
PLOD3-216ENST00000489927 CXCL3P19876 107 aa11.07□□□□□ -0.64
PLOD3-216ENST00000489927 TAS2R60P59551 318 aa11.07□□□□□ -0.64
PLOD3-216ENST00000489927 RAP2BP61225 183 aa11.07□□□□□ -0.64
PLOD3-216ENST00000489927 PPP1R1AQ13522 171 aa11.07□□□□□ -0.64
PLOD3-216ENST00000489927 CYP2G1PQ6ZSU1 146 aa11.07□□□□□ -0.64
PLOD3-216ENST00000489927 SSX7Q7RTT5 188 aa11.07□□□□□ -0.64
PLOD3-216ENST00000489927 TMEM144Q7Z5S9 345 aa11.07□□□□□ -0.64
PLOD3-216ENST00000489927 TMEM256Q8N2U0 113 aa11.07□□□□□ -0.64
PLOD3-216ENST00000489927 TRIM63Q969Q1 353 aa11.07□□□□□ -0.64
PLOD3-216ENST00000489927 C16orf74Q96GX8 76 aa11.07□□□□□ -0.64
PLOD3-216ENST00000489927 UHRF2Q96PU4 802 aa11.07□□□□□ -0.64
PLOD3-216ENST00000489927 STRAPQ9Y3F4 350 aaKnown RBP11.07□□□□□ -0.64
PLOD3-216ENST00000489927 SMCO3A2RU48 225 aa11.06□□□□□ -0.64
PLOD3-216ENST00000489927 HYPMO75409 117 aa11.06□□□□□ -0.64
PLOD3-216ENST00000489927 SFT2D2O95562 160 aa11.06□□□□□ -0.64
PLOD3-216ENST00000489927 CLINT1Q14677 625 aa11.06□□□□□ -0.64
PLOD3-216ENST00000489927 PPP1R14DQ9NXH3 145 aa11.06□□□□□ -0.64
PLOD3-216ENST00000489927 TIMM8BQ9Y5J9 83 aaPredicted RBP11.06□□□□□ -0.64
PLOD3-216ENST00000489927 A0A087X0K7 114 aa11.05□□□□□ -0.64
PLOD3-216ENST00000489927 OR5G3P0C626 314 aa11.05□□□□□ -0.64
PLOD3-216ENST00000489927 LINC00869P0C866 280 aa11.05□□□□□ -0.64
PLOD3-216ENST00000489927 TMBIM6P55061 237 aa11.05□□□□□ -0.64
PLOD3-216ENST00000489927 PSG3Q16557 428 aa11.05□□□□□ -0.64
PLOD3-216ENST00000489927 TOMM5Q8N4H5 51 aa11.05□□□□□ -0.64
PLOD3-216ENST00000489927 RNASE8Q8TDE3 154 aaKnown RBP11.05□□□□□ -0.64
PLOD3-216ENST00000489927 Q9H8V8 135 aa11.05□□□□□ -0.64
PLOD3-216ENST00000489927 NOP10Q9NPE3 64 aaKnown RBP11.05□□□□□ -0.64
PLOD3-216ENST00000489927 CDKN1BP46527 198 aa11.04□□□□□ -0.64
PLOD3-216ENST00000489927 AP3S2P59780 193 aa11.04□□□□□ -0.64
PLOD3-216ENST00000489927 PLP1P60201 277 aa11.04□□□□□ -0.64
PLOD3-216ENST00000489927 POLR2GP62487 172 aaKnown RBP eCLIP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms