RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 OR4C12Q96R67 309 aa14.64□□□□□ -0.07
POLR2J3-205ENST00000489144 KCNIP2Q9NS61 270 aa14.64□□□□□ -0.07
POLR2J3-205ENST00000489144 CRXO43186 299 aaPredicted RBP14.64□□□□□ -0.07
POLR2J3-205ENST00000489144 GNG4P50150 75 aa14.64□□□□□ -0.07
POLR2J3-205ENST00000489144 ACSM6Q6P461 480 aa14.64□□□□□ -0.07
POLR2J3-205ENST00000489144 OR10G9Q8NGN4 311 aa14.64□□□□□ -0.07
POLR2J3-205ENST00000489144 OR10G7Q8NGN6 311 aa14.64□□□□□ -0.07
POLR2J3-205ENST00000489144 KAAG1Q9UBP8 84 aa14.63□□□□□ -0.07
POLR2J3-205ENST00000489144 USP9YO00507 2555 aaPredicted RBP14.63□□□□□ -0.07
POLR2J3-205ENST00000489144 COL8A1P27658 744 aa14.63□□□□□ -0.07
POLR2J3-205ENST00000489144 RPL32P62910 135 aaKnown RBP14.63□□□□□ -0.07
POLR2J3-205ENST00000489144 NAA38Q9BRA0 125 aaKnown RBP14.63□□□□□ -0.07
POLR2J3-205ENST00000489144 MS4A6AQ9H2W1 248 aa14.63□□□□□ -0.07
POLR2J3-205ENST00000489144 SERTAD4Q9NUC0 356 aa14.63□□□□□ -0.07
POLR2J3-205ENST00000489144 TMEM140Q9NV12 185 aa14.63□□□□□ -0.07
POLR2J3-205ENST00000489144 PF4V1P10720 104 aa14.62□□□□□ -0.07
POLR2J3-205ENST00000489144 COX7A1P24310 79 aa14.62□□□□□ -0.07
POLR2J3-205ENST00000489144 HSD17B10Q99714 261 aaKnown RBP14.62□□□□□ -0.07
POLR2J3-205ENST00000489144 ONECUT1Q9UBC0 465 aa14.62□□□□□ -0.07
POLR2J3-205ENST00000489144 TRAV3A0A0B4J244 114 aa14.62□□□□□ -0.07
POLR2J3-205ENST00000489144 ISLRO14498 428 aa14.62□□□□□ -0.07
POLR2J3-205ENST00000489144 TMEM155Q4W5P6 130 aa14.62□□□□□ -0.07
POLR2J3-205ENST00000489144 ZBTB34Q8NCN2 500 aa14.62□□□□□ -0.07
POLR2J3-205ENST00000489144 NEU4Q8WWR8 484 aaPredicted RBP14.62□□□□□ -0.07
POLR2J3-205ENST00000489144 PMCHL2Q9BQD1 86 aa14.62□□□□□ -0.07
POLR2J3-205ENST00000489144 A0A1W2PRD5 423 aa14.61□□□□□ -0.07
POLR2J3-205ENST00000489144 A0A1W2PRF3 423 aa14.61□□□□□ -0.07
POLR2J3-205ENST00000489144 A0A1W2PRM7 423 aa14.61□□□□□ -0.07
POLR2J3-205ENST00000489144 HLA-DQA1P01909 254 aa14.61□□□□□ -0.07
POLR2J3-205ENST00000489144 APOA2P02652 100 aa14.61□□□□□ -0.07
POLR2J3-205ENST00000489144 DLX6P56179 175 aa14.61□□□□□ -0.07
POLR2J3-205ENST00000489144 CX3CL1P78423 397 aa14.61□□□□□ -0.07
POLR2J3-205ENST00000489144 ADAMTSL5Q6ZMM2 481 aa14.61□□□□□ -0.07
POLR2J3-205ENST00000489144 SMIM20Q8N5G0 67 aa14.61□□□□□ -0.07
POLR2J3-205ENST00000489144 ZDHHC16Q969W1 377 aa14.61□□□□□ -0.07
POLR2J3-205ENST00000489144 IGKV1-16P04430 117 aa14.61□□□□□ -0.07
POLR2J3-205ENST00000489144 ATP5G3P48201 142 aa14.61□□□□□ -0.07
POLR2J3-205ENST00000489144 SLC25A48Q6ZT89 311 aaKnown RBP14.61□□□□□ -0.07
POLR2J3-205ENST00000489144 C2orf91Q6ZV80 131 aa14.61□□□□□ -0.07
POLR2J3-205ENST00000489144 BPIFA4PQ86YQ2 179 aa14.61□□□□□ -0.07
POLR2J3-205ENST00000489144 HARBI1Q96MB7 349 aa14.61□□□□□ -0.07
POLR2J3-205ENST00000489144 OR9G9P0C7N8 305 aa14.6□□□□□ -0.07
POLR2J3-205ENST00000489144 FABP2P12104 132 aa14.6□□□□□ -0.07
POLR2J3-205ENST00000489144 MYOD1P15172 320 aa14.6□□□□□ -0.07
POLR2J3-205ENST00000489144 KIR3DL3Q8N743 410 aa14.6□□□□□ -0.07
POLR2J3-205ENST00000489144 OR10X1Q8NGY0 326 aa14.6□□□□□ -0.07
POLR2J3-205ENST00000489144 RAB1CQ92928 201 aa14.6□□□□□ -0.07
POLR2J3-205ENST00000489144 TIMD4Q96H15 378 aa14.6□□□□□ -0.07
POLR2J3-205ENST00000489144 S1PR3Q99500 378 aa14.6□□□□□ -0.07
POLR2J3-205ENST00000489144 CITED1Q99966 193 aa14.6□□□□□ -0.07
POLR2J3-205ENST00000489144 MRPL20Q9BYC9 149 aaKnown RBP14.6□□□□□ -0.07
POLR2J3-205ENST00000489144 ZNF257Q9Y2Q1 563 aa14.6□□□□□ -0.07
POLR2J3-205ENST00000489144 PTPN13Q12923 2485 aa14.6□□□□□ -0.07
POLR2J3-205ENST00000489144 KMT2BQ9UMN6 2715 aaPredicted RBP14.6□□□□□ -0.07
POLR2J3-205ENST00000489144 IGHV3-72A0A0B4J1Y9 119 aa14.6□□□□□ -0.07
POLR2J3-205ENST00000489144 IGHV1-8P0DP01 117 aa14.6□□□□□ -0.07
POLR2J3-205ENST00000489144 UBE2L5PA0A1B0GUS4 154 aa14.59□□□□□ -0.07
POLR2J3-205ENST00000489144 KIR3DS1Q14943 382 aa14.59□□□□□ -0.07
POLR2J3-205ENST00000489144 H2BFWTQ7Z2G1 175 aa14.59□□□□□ -0.07
POLR2J3-205ENST00000489144 LINC00574Q9H8X3 128 aa14.59□□□□□ -0.07
POLR2J3-205ENST00000489144 SPANXB1Q9NS25 103 aaPredicted RBP14.59□□□□□ -0.07
POLR2J3-205ENST00000489144 PSENENQ9NZ42 101 aa14.59□□□□□ -0.07
POLR2J3-205ENST00000489144 TNCP24821 2201 aa14.59□□□□□ -0.07
POLR2J3-205ENST00000489144 CT45A6P0DMU7 189 aa14.59□□□□□ -0.07
POLR2J3-205ENST00000489144 CT45A5P0DMU8 189 aa14.59□□□□□ -0.07
POLR2J3-205ENST00000489144 CT45A7P0DMV0 189 aa14.59□□□□□ -0.07
POLR2J3-205ENST00000489144 ABHD12Q8N2K0 398 aa14.59□□□□□ -0.07
POLR2J3-205ENST00000489144 TMEM191AQ9H0A3 160 aa14.59□□□□□ -0.07
POLR2J3-205ENST00000489144 UFC1Q9Y3C8 167 aa14.59□□□□□ -0.07
POLR2J3-205ENST00000489144 RAX2Q96IS3 184 aa14.58□□□□□ -0.08
POLR2J3-205ENST00000489144 SPAG8Q99932 426 aaPredicted RBP14.58□□□□□ -0.08
POLR2J3-205ENST00000489144 BPESC1Q9GZL8 116 aa14.58□□□□□ -0.08
POLR2J3-205ENST00000489144 YAE1D1Q9NRH1 226 aa14.58□□□□□ -0.08
POLR2J3-205ENST00000489144 VWC2LB2RUY7 222 aa14.58□□□□□ -0.08
POLR2J3-205ENST00000489144 APCSP02743 223 aa14.58□□□□□ -0.08
POLR2J3-205ENST00000489144 AMY1AP04745 511 aa14.58□□□□□ -0.08
POLR2J3-205ENST00000489144 ID1P41134 155 aa14.58□□□□□ -0.08
POLR2J3-205ENST00000489144 KLRD1Q13241 179 aa14.58□□□□□ -0.08
POLR2J3-205ENST00000489144 OR52E5Q8NH55 327 aa14.58□□□□□ -0.08
POLR2J3-205ENST00000489144 OR2T6Q8NHC8 308 aa14.58□□□□□ -0.08
POLR2J3-205ENST00000489144 DDB2Q92466 427 aa14.57□□□□□ -0.08
POLR2J3-205ENST00000489144 HSPB8Q9UJY1 196 aa14.57□□□□□ -0.08
POLR2J3-205ENST00000489144 TET2Q6N021 2002 aaPredicted RBP14.57□□□□□ -0.08
POLR2J3-205ENST00000489144 B5MCH6 92 aa14.57□□□□□ -0.08
POLR2J3-205ENST00000489144 SYS1-DBNDD2H3BUS1 97 aa14.57□□□□□ -0.08
POLR2J3-205ENST00000489144 K7EN84 100 aa14.57□□□□□ -0.08
POLR2J3-205ENST00000489144 SPINK4O60575 86 aa14.57□□□□□ -0.08
POLR2J3-205ENST00000489144 IGHV4-39P01824 125 aa14.57□□□□□ -0.08
POLR2J3-205ENST00000489144 COX8AP10176 69 aa14.57□□□□□ -0.08
POLR2J3-205ENST00000489144 ZFP36P26651 326 aaKnown RBP14.57□□□□□ -0.08
POLR2J3-205ENST00000489144 RAB9BQ9NP90 201 aa14.57□□□□□ -0.08
POLR2J3-205ENST00000489144 V9GYV3 84 aa14.57□□□□□ -0.08
POLR2J3-205ENST00000489144 PLXNB1O43157 2135 aa14.56□□□□□ -0.08
POLR2J3-205ENST00000489144 SPANXN5Q5MJ07 72 aa14.56□□□□□ -0.08
POLR2J3-205ENST00000489144 TXNDC17Q9BRA2 123 aa14.56□□□□□ -0.08
POLR2J3-205ENST00000489144 SYNGR2O43760 224 aa14.56□□□□□ -0.08
POLR2J3-205ENST00000489144 P0C879 139 aa14.56□□□□□ -0.08
POLR2J3-205ENST00000489144 C8orf86Q6ZUL3 223 aa14.56□□□□□ -0.08
POLR2J3-205ENST00000489144 CCL19Q99731 98 aa14.56□□□□□ -0.08
POLR2J3-205ENST00000489144 SRRM4A7MD48 611 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms