RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 PFDN2Q9UHV9 154 aa7.24□□□□□ -1.25
MCF2L-227ENST00000486806 VWFP04275 2813 aa7.23□□□□□ -1.25
MCF2L-227ENST00000486806 TRAV5A0A0B4J249 113 aa7.23□□□□□ -1.25
MCF2L-227ENST00000486806 CTXND1A0A1B0GTU2 59 aa7.23□□□□□ -1.25
MCF2L-227ENST00000486806 WIPF1O43516 503 aa7.23□□□□□ -1.25
MCF2L-227ENST00000486806 STAG3L2P0CL84 134 aa7.23□□□□□ -1.25
MCF2L-227ENST00000486806 STAG3L3P0CL85 134 aa7.23□□□□□ -1.25
MCF2L-227ENST00000486806 GP9P14770 177 aa7.23□□□□□ -1.25
MCF2L-227ENST00000486806 FAM90A2PQ658T7 463 aa7.23□□□□□ -1.25
MCF2L-227ENST00000486806 FAM122CQ6P4D5 195 aa7.23□□□□□ -1.25
MCF2L-227ENST00000486806 ZNF680Q8NEM1 530 aa7.23□□□□□ -1.25
MCF2L-227ENST00000486806 RAB24Q969Q5 203 aa7.23□□□□□ -1.25
MCF2L-227ENST00000486806 ZNF503Q96F45 646 aa7.23□□□□□ -1.25
MCF2L-227ENST00000486806 GRAMD2BQ96HH9 432 aa7.23□□□□□ -1.25
MCF2L-227ENST00000486806 ACTR3CQ9C0K3 210 aaPredicted RBP7.23□□□□□ -1.25
MCF2L-227ENST00000486806 TMEM14CQ9P0S9 112 aa7.23□□□□□ -1.25
MCF2L-227ENST00000486806 RNF24Q9Y225 148 aa7.23□□□□□ -1.25
MCF2L-227ENST00000486806 A0A1W2PPV4 95 aa7.22□□□□□ -1.25
MCF2L-227ENST00000486806 SAP30O75446 220 aa7.22□□□□□ -1.25
MCF2L-227ENST00000486806 EIF3GO75821 320 aaKnown RBP eCLIP7.22□□□□□ -1.25
MCF2L-227ENST00000486806 IGLV1-51P01701 117 aa7.22□□□□□ -1.25
MCF2L-227ENST00000486806 IGLC2P0DOY2 106 aa7.22□□□□□ -1.25
MCF2L-227ENST00000486806 RPL7P18124 248 aaKnown RBP7.22□□□□□ -1.25
MCF2L-227ENST00000486806 CD33P20138 364 aa7.22□□□□□ -1.25
MCF2L-227ENST00000486806 INSL3P51460 131 aa7.22□□□□□ -1.25
MCF2L-227ENST00000486806 TAS2R45P59539 299 aa7.22□□□□□ -1.25
MCF2L-227ENST00000486806 IFITM2Q01629 132 aa7.22□□□□□ -1.25
MCF2L-227ENST00000486806 DEFB114Q30KQ6 69 aa7.22□□□□□ -1.25
MCF2L-227ENST00000486806 KHDC3LQ587J8 217 aa7.22□□□□□ -1.25
MCF2L-227ENST00000486806 SIGLEC15Q6ZMC9 328 aa7.22□□□□□ -1.25
MCF2L-227ENST00000486806 FAM213BQ8TBF2 198 aa7.22□□□□□ -1.25
MCF2L-227ENST00000486806 RNF141Q8WVD5 230 aa7.22□□□□□ -1.25
MCF2L-227ENST00000486806 C17orf77Q96MU5 243 aa7.22□□□□□ -1.25
MCF2L-227ENST00000486806 GPR82Q96P67 336 aa7.22□□□□□ -1.25
MCF2L-227ENST00000486806 MCRIP2Q9BUT9 160 aaKnown RBP7.22□□□□□ -1.25
MCF2L-227ENST00000486806 SMAD5-AS1Q9Y6J3 95 aa7.22□□□□□ -1.25
MCF2L-227ENST00000486806 A0A087X0K7 114 aa7.21□□□□□ -1.26
MCF2L-227ENST00000486806 MAP1LC3B2A6NCE7 125 aa7.21□□□□□ -1.26
MCF2L-227ENST00000486806 HELTA6NFD8 242 aa7.21□□□□□ -1.26
MCF2L-227ENST00000486806 HMGB3O15347 200 aaKnown RBP7.21□□□□□ -1.26
MCF2L-227ENST00000486806 IFNA7P01567 189 aa7.21□□□□□ -1.26
MCF2L-227ENST00000486806 CD5P06127 495 aa7.21□□□□□ -1.26
MCF2L-227ENST00000486806 PYYP10082 97 aa7.21□□□□□ -1.26
MCF2L-227ENST00000486806 CD300EQ496F6 205 aaPredicted RBP7.21□□□□□ -1.26
MCF2L-227ENST00000486806 C9orf66Q5T8R8 295 aa7.21□□□□□ -1.26
MCF2L-227ENST00000486806 PQLC2Q6ZP29 291 aa7.21□□□□□ -1.26
MCF2L-227ENST00000486806 TCF24Q7RTU0 167 aa7.21□□□□□ -1.26
MCF2L-227ENST00000486806 BPIFA4PQ86YQ2 179 aa7.21□□□□□ -1.26
MCF2L-227ENST00000486806 TMEM61Q8N0U2 210 aa7.21□□□□□ -1.26
MCF2L-227ENST00000486806 OR8I2Q8N0Y5 310 aa7.21□□□□□ -1.26
MCF2L-227ENST00000486806 STXBP6Q8NFX7 210 aa7.21□□□□□ -1.26
MCF2L-227ENST00000486806 OR2K2Q8NGT1 345 aa7.21□□□□□ -1.26
MCF2L-227ENST00000486806 DYNLRB2Q8TF09 96 aa7.21□□□□□ -1.26
MCF2L-227ENST00000486806 MBD3L1Q8WWY6 194 aa7.21□□□□□ -1.26
MCF2L-227ENST00000486806 MAP1LC3BQ9GZQ8 125 aa7.21□□□□□ -1.26
MCF2L-227ENST00000486806 WNK1Q9H4A3 2382 aa7.21□□□□□ -1.26
MCF2L-227ENST00000486806 DNAH3Q8TD57 4116 aa7.21□□□□□ -1.26
MCF2L-227ENST00000486806 SOCS3O14543 225 aa7.2□□□□□ -1.26
MCF2L-227ENST00000486806 TSPAN4O14817 238 aa7.2□□□□□ -1.26
MCF2L-227ENST00000486806 OR7C2O60412 319 aa7.2□□□□□ -1.26
MCF2L-227ENST00000486806 ARL14EPLP0DKL9 152 aa7.2□□□□□ -1.26
MCF2L-227ENST00000486806 IGLL1P15814 213 aa7.2□□□□□ -1.26
MCF2L-227ENST00000486806 GALR1P47211 349 aa7.2□□□□□ -1.26
MCF2L-227ENST00000486806 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.2□□□□□ -1.26
MCF2L-227ENST00000486806 SUN5Q8TC36 379 aa7.2□□□□□ -1.26
MCF2L-227ENST00000486806 FXYD5Q96DB9 178 aa7.2□□□□□ -1.26
MCF2L-227ENST00000486806 PAXXQ9BUH6 204 aa7.2□□□□□ -1.26
MCF2L-227ENST00000486806 OR51M1Q9H341 326 aa7.2□□□□□ -1.26
MCF2L-227ENST00000486806 HRH4Q9H3N8 390 aa7.2□□□□□ -1.26
MCF2L-227ENST00000486806 UBQLN2Q9UHD9 624 aa7.2□□□□□ -1.26
MCF2L-227ENST00000486806 SELENOKQ9Y6D0 94 aa7.2□□□□□ -1.26
MCF2L-227ENST00000486806 TRAV2A0A0B4J234 112 aa7.19□□□□□ -1.26
MCF2L-227ENST00000486806 TRAV1-1A0A0B4J248 108 aa7.19□□□□□ -1.26
MCF2L-227ENST00000486806 TRAV25A0A0B4J276 109 aa7.19□□□□□ -1.26
MCF2L-227ENST00000486806 IZUMO1RA6ND01 250 aa7.19□□□□□ -1.26
MCF2L-227ENST00000486806 ZNF705EA8MWA4 302 aaPredicted RBP7.19□□□□□ -1.26
MCF2L-227ENST00000486806 H3BQ15 152 aa7.19□□□□□ -1.26
MCF2L-227ENST00000486806 CXorf1O96002 111 aa7.19□□□□□ -1.26
MCF2L-227ENST00000486806 H2AFB1P0C5Y9 115 aa7.19□□□□□ -1.26
MCF2L-227ENST00000486806 HIST1H1EP10412 219 aaKnown RBP7.19□□□□□ -1.26
MCF2L-227ENST00000486806 GCHFRP30047 84 aa7.19□□□□□ -1.26
MCF2L-227ENST00000486806 MEOX2P50222 304 aa7.19□□□□□ -1.26
MCF2L-227ENST00000486806 UBE2L3P68036 154 aaKnown RBP7.19□□□□□ -1.26
MCF2L-227ENST00000486806 LCN15Q6UWW0 184 aa7.19□□□□□ -1.26
MCF2L-227ENST00000486806 ZNF767PQ75MW2 155 aa7.19□□□□□ -1.26
MCF2L-227ENST00000486806 LYPD6BQ8NI32 183 aa7.19□□□□□ -1.26
MCF2L-227ENST00000486806 LRRC20Q8TCA0 184 aa7.19□□□□□ -1.26
MCF2L-227ENST00000486806 DCANP1Q8TF63 244 aa7.19□□□□□ -1.26
MCF2L-227ENST00000486806 SAT2Q96F10 170 aaPredicted RBP7.19□□□□□ -1.26
MCF2L-227ENST00000486806 GPR61Q9BZJ8 451 aa7.19□□□□□ -1.26
MCF2L-227ENST00000486806 MS4A6AQ9H2W1 248 aa7.19□□□□□ -1.26
MCF2L-227ENST00000486806 NRN1Q9NPD7 142 aa7.19□□□□□ -1.26
MCF2L-227ENST00000486806 ZNF586Q9NXT0 402 aa7.19□□□□□ -1.26
MCF2L-227ENST00000486806 TRBV19A0A075B6N1 114 aa7.18□□□□□ -1.26
MCF2L-227ENST00000486806 SLC17A3O00476 420 aa7.18□□□□□ -1.26
MCF2L-227ENST00000486806 RGS13O14921 159 aa7.18□□□□□ -1.26
MCF2L-227ENST00000486806 ZNF253O75346 499 aa7.18□□□□□ -1.26
MCF2L-227ENST00000486806 NDUFB4O95168 129 aa7.18□□□□□ -1.26
MCF2L-227ENST00000486806 NMBP08949 121 aa7.18□□□□□ -1.26
MCF2L-227ENST00000486806 OR10J4P0C629 311 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms