RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 RAB9BQ9NP90 201 aa11.89□□□□□ -0.51
TTC3-219ENST00000485402 SPG11Q96JI7 2443 aa11.89□□□□□ -0.51
TTC3-219ENST00000485402 LHBP01229 141 aa11.89□□□□□ -0.51
TTC3-219ENST00000485402 FXYD7P58549 80 aa11.89□□□□□ -0.51
TTC3-219ENST00000485402 Q71RC1 249 aaPredicted RBP11.89□□□□□ -0.51
TTC3-219ENST00000485402 TMUB1Q9BVT8 246 aa11.89□□□□□ -0.51
TTC3-219ENST00000485402 LYNX1G3V0Z9 82 aa11.88□□□□□ -0.51
TTC3-219ENST00000485402 TAX1BP3O14907 124 aa11.88□□□□□ -0.51
TTC3-219ENST00000485402 LYNX1P0DP58 116 aa11.88□□□□□ -0.51
TTC3-219ENST00000485402 CFHR2P36980 270 aa11.88□□□□□ -0.51
TTC3-219ENST00000485402 TMEM116Q8NCL8 245 aa11.88□□□□□ -0.51
TTC3-219ENST00000485402 TPSG1Q9NRR2 321 aa11.88□□□□□ -0.51
TTC3-219ENST00000485402 LOC389332A0A1B0GUA5 103 aa11.88□□□□□ -0.51
TTC3-219ENST00000485402 B9A039 149 aa11.88□□□□□ -0.51
TTC3-219ENST00000485402 PPIAL4DF5H284 164 aa11.88□□□□□ -0.51
TTC3-219ENST00000485402 CDKN1BP46527 198 aa11.88□□□□□ -0.51
TTC3-219ENST00000485402 DLX1P56177 255 aa11.88□□□□□ -0.51
TTC3-219ENST00000485402 BVES-AS1Q5T3Y7 98 aa11.88□□□□□ -0.51
TTC3-219ENST00000485402 WIPF2Q8TF74 440 aaPredicted RBP11.88□□□□□ -0.51
TTC3-219ENST00000485402 CST9LQ9H4G1 147 aa11.88□□□□□ -0.51
TTC3-219ENST00000485402 ZNF672Q499Z4 452 aaPredicted RBP11.88□□□□□ -0.51
TTC3-219ENST00000485402 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.88□□□□□ -0.51
TTC3-219ENST00000485402 RPUSD1Q9UJJ7 312 aaKnown RBP11.88□□□□□ -0.51
TTC3-219ENST00000485402 MED13LQ71F56 2210 aa11.88□□□□□ -0.51
TTC3-219ENST00000485402 TRAV30A0A087WSZ9 112 aa11.87□□□□□ -0.51
TTC3-219ENST00000485402 TCRBV4S1A1TA0A5B7 111 aa11.87□□□□□ -0.51
TTC3-219ENST00000485402 C19orf84I3L1E1 186 aa11.87□□□□□ -0.51
TTC3-219ENST00000485402 ITGB1BP1O14713 200 aa11.87□□□□□ -0.51
TTC3-219ENST00000485402 KLF5Q13887 457 aaPredicted RBP11.87□□□□□ -0.51
TTC3-219ENST00000485402 LRRC10Q5BKY1 277 aa11.87□□□□□ -0.51
TTC3-219ENST00000485402 TEX45Q8NA69 505 aa11.87□□□□□ -0.51
TTC3-219ENST00000485402 CACNG8Q8WXS5 425 aa11.87□□□□□ -0.51
TTC3-219ENST00000485402 NDUFA4L2Q9NRX3 87 aa11.87□□□□□ -0.51
TTC3-219ENST00000485402 FNDC10F2Z333 226 aa11.87□□□□□ -0.51
TTC3-219ENST00000485402 SUB1P53999 127 aaKnown RBP eCLIP11.87□□□□□ -0.51
TTC3-219ENST00000485402 FAM231DQ6ZW35 169 aa11.87□□□□□ -0.51
TTC3-219ENST00000485402 FOXE3Q13461 319 aa11.87□□□□□ -0.51
TTC3-219ENST00000485402 CR1LQ2VPA4 569 aa11.87□□□□□ -0.51
TTC3-219ENST00000485402 RASL11AQ6T310 242 aa11.87□□□□□ -0.51
TTC3-219ENST00000485402 EXOC3-AS1Q8N2X6 119 aa11.87□□□□□ -0.51
TTC3-219ENST00000485402 OR8A1Q8NGG7 326 aa11.87□□□□□ -0.51
TTC3-219ENST00000485402 SERTM2A0A1B0GWG4 89 aa11.86□□□□□ -0.51
TTC3-219ENST00000485402 LYZP61626 148 aa11.86□□□□□ -0.51
TTC3-219ENST00000485402 SLC25A48Q6ZT89 311 aaKnown RBP11.86□□□□□ -0.51
TTC3-219ENST00000485402 GOLT1AQ6ZVE7 132 aa11.86□□□□□ -0.51
TTC3-219ENST00000485402 GAFA1Q96PS6 74 aa11.86□□□□□ -0.51
TTC3-219ENST00000485402 TMSB15BA0A087X1C1 80 aa11.86□□□□□ -0.51
TTC3-219ENST00000485402 PSMB11A5LHX3 300 aa11.86□□□□□ -0.51
TTC3-219ENST00000485402 K7EP13 123 aa11.86□□□□□ -0.51
TTC3-219ENST00000485402 OR2J3O76001 311 aa11.86□□□□□ -0.51
TTC3-219ENST00000485402 LY6HO94772 140 aa11.86□□□□□ -0.51
TTC3-219ENST00000485402 PSG9Q00887 426 aa11.86□□□□□ -0.51
TTC3-219ENST00000485402 ST20Q9HBF5 79 aa11.86□□□□□ -0.51
TTC3-219ENST00000485402 OCIAD2Q56VL3 154 aa11.86□□□□□ -0.51
TTC3-219ENST00000485402 PRSS3P2Q8NHM4 247 aa11.86□□□□□ -0.51
TTC3-219ENST00000485402 PERPQ96FX8 193 aa11.86□□□□□ -0.51
TTC3-219ENST00000485402 RITA1Q96K30 269 aa11.86□□□□□ -0.51
TTC3-219ENST00000485402 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.85□□□□□ -0.51
TTC3-219ENST00000485402 ARF6P62330 175 aa11.85□□□□□ -0.51
TTC3-219ENST00000485402 POU2AF1Q16633 256 aa11.85□□□□□ -0.51
TTC3-219ENST00000485402 ANKRD39Q53RE8 183 aa11.85□□□□□ -0.51
TTC3-219ENST00000485402 C12orf54Q6X4T0 127 aa11.85□□□□□ -0.51
TTC3-219ENST00000485402 SRSF12Q8WXF0 261 aaKnown RBP11.85□□□□□ -0.51
TTC3-219ENST00000485402 Q9H3A6 140 aa11.85□□□□□ -0.51
TTC3-219ENST00000485402 HRNRQ86YZ3 2850 aaPredicted RBP11.85□□□□□ -0.51
TTC3-219ENST00000485402 LRRK2Q5S007 2527 aa11.85□□□□□ -0.51
TTC3-219ENST00000485402 FAM120AOSQ5T036 256 aa11.85□□□□□ -0.51
TTC3-219ENST00000485402 ZNF714Q96N38 554 aa11.85□□□□□ -0.51
TTC3-219ENST00000485402 AP1S3Q96PC3 154 aa11.85□□□□□ -0.51
TTC3-219ENST00000485402 DCHS2Q6V1P9 2916 aa11.85□□□□□ -0.51
TTC3-219ENST00000485402 PPIAL4EA0A075B759 164 aa11.85□□□□□ -0.51
TTC3-219ENST00000485402 TRAV8-6A0A0B4J262 113 aa11.85□□□□□ -0.51
TTC3-219ENST00000485402 APOHP02749 345 aaPredicted RBP11.85□□□□□ -0.51
TTC3-219ENST00000485402 PPIAL4FP0DN26 164 aa11.85□□□□□ -0.51
TTC3-219ENST00000485402 RAB37Q96AX2 223 aa11.85□□□□□ -0.51
TTC3-219ENST00000485402 IGKV1D-37A0A075B6S9 117 aa11.84□□□□□ -0.51
TTC3-219ENST00000485402 GAGE12BA1L429 117 aa11.84□□□□□ -0.51
TTC3-219ENST00000485402 OR5AL1P0C617 328 aa11.84□□□□□ -0.51
TTC3-219ENST00000485402 RIPPLY3P57055 190 aa11.84□□□□□ -0.51
TTC3-219ENST00000485402 RBPMS2Q6ZRY4 209 aaKnown RBP11.84□□□□□ -0.51
TTC3-219ENST00000485402 ARL6IP6Q8N6S5 226 aa11.84□□□□□ -0.51
TTC3-219ENST00000485402 OSR1Q8TAX0 266 aaPredicted RBP11.84□□□□□ -0.51
TTC3-219ENST00000485402 HILPDAQ9Y5L2 63 aa11.84□□□□□ -0.51
TTC3-219ENST00000485402 DOPEY1Q5JWR5 2465 aa11.84□□□□□ -0.51
TTC3-219ENST00000485402 A0A1B0GXF2 115 aa11.84□□□□□ -0.51
TTC3-219ENST00000485402 C22orf46C9J442 243 aa11.84□□□□□ -0.51
TTC3-219ENST00000485402 TMEM178BH3BS89 294 aa11.84□□□□□ -0.51
TTC3-219ENST00000485402 HLA-DRB1P01911 266 aa11.84□□□□□ -0.51
TTC3-219ENST00000485402 LIPFP07098 398 aa11.84□□□□□ -0.51
TTC3-219ENST00000485402 TACC2O95359 2948 aa11.83□□□□□ -0.52
TTC3-219ENST00000485402 LOXP28300 417 aaPredicted RBP11.83□□□□□ -0.52
TTC3-219ENST00000485402 GPR183P32249 361 aa11.83□□□□□ -0.52
TTC3-219ENST00000485402 FAM162BQ5T6X4 162 aa11.83□□□□□ -0.52
TTC3-219ENST00000485402 ATP5L2Q7Z4Y8 100 aa11.83□□□□□ -0.52
TTC3-219ENST00000485402 WFDC3Q8IUB2 231 aa11.83□□□□□ -0.52
TTC3-219ENST00000485402 OR4C13Q8NGP0 309 aa11.83□□□□□ -0.52
TTC3-219ENST00000485402 A0A1W2PPI3 338 aa11.83□□□□□ -0.52
TTC3-219ENST00000485402 FA2HQ7L5A8 372 aa11.83□□□□□ -0.52
TTC3-219ENST00000485402 BPIFA4PQ86YQ2 179 aa11.83□□□□□ -0.52
TTC3-219ENST00000485402 A0A1W2PPR1 153 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms