RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 C1RLQ9NZP8 487 aa10.2□□□□□ -0.78
SEC13-216ENST00000479868 USP24Q9UPU5 2620 aa10.2□□□□□ -0.78
SEC13-216ENST00000479868 ZFYVE26Q68DK2 2539 aa10.2□□□□□ -0.78
SEC13-216ENST00000479868 TRAV30A0A087WSZ9 112 aa10.19□□□□□ -0.78
SEC13-216ENST00000479868 FCGR2BP31994 310 aaPredicted RBP10.19□□□□□ -0.78
SEC13-216ENST00000479868 BRS3P32247 399 aa10.19□□□□□ -0.78
SEC13-216ENST00000479868 MRPL54Q6P161 138 aaKnown RBP10.19□□□□□ -0.78
SEC13-216ENST00000479868 BPIFA4PQ86YQ2 179 aa10.19□□□□□ -0.78
SEC13-216ENST00000479868 FMC1Q96HJ9 113 aa10.19□□□□□ -0.78
SEC13-216ENST00000479868 TRBV19A0A075B6N1 114 aa10.19□□□□□ -0.78
SEC13-216ENST00000479868 TRAV8-1A0A0A6YYK1 113 aa10.19□□□□□ -0.78
SEC13-216ENST00000479868 IGHV4-61A0A0C4DH41 118 aa10.19□□□□□ -0.78
SEC13-216ENST00000479868 OR2T8A6NH00 312 aa10.19□□□□□ -0.78
SEC13-216ENST00000479868 LTAP01374 205 aa10.19□□□□□ -0.78
SEC13-216ENST00000479868 IGLC2P0DOY2 106 aa10.19□□□□□ -0.78
SEC13-216ENST00000479868 LINC00322Q6ZN03 302 aaPredicted RBP10.19□□□□□ -0.78
SEC13-216ENST00000479868 TMEM136Q6ZRR5 245 aa10.19□□□□□ -0.78
SEC13-216ENST00000479868 THYN1Q9P016 225 aa10.19□□□□□ -0.78
SEC13-216ENST00000479868 TP53TG3Q9ULZ0 132 aa10.19□□□□□ -0.78
SEC13-216ENST00000479868 POLR3KQ9Y2Y1 108 aaPredicted RBP10.19□□□□□ -0.78
SEC13-216ENST00000479868 IGHV3OR16-10A0A075B7F0 116 aa10.18□□□□□ -0.78
SEC13-216ENST00000479868 TRBV9A0A0B4J1U6 114 aa10.18□□□□□ -0.78
SEC13-216ENST00000479868 IZUMO1RA6ND01 250 aa10.18□□□□□ -0.78
SEC13-216ENST00000479868 SH2D7A6NKC9 451 aaPredicted RBP10.18□□□□□ -0.78
SEC13-216ENST00000479868 MRPS12O15235 138 aaKnown RBP10.18□□□□□ -0.78
SEC13-216ENST00000479868 NAT8BQ9UHF3 227 aa10.18□□□□□ -0.78
SEC13-216ENST00000479868 ATP6V0E1O15342 81 aa10.18□□□□□ -0.78
SEC13-216ENST00000479868 PRB4P10163 310 aaPredicted RBP10.18□□□□□ -0.78
SEC13-216ENST00000479868 ECSCRQ19T08 205 aa10.18□□□□□ -0.78
SEC13-216ENST00000479868 Q71RC1 249 aaPredicted RBP10.18□□□□□ -0.78
SEC13-216ENST00000479868 OR4F17Q8NGA8 305 aa10.18□□□□□ -0.78
SEC13-216ENST00000479868 TMEM18Q96B42 140 aa10.18□□□□□ -0.78
SEC13-216ENST00000479868 SMIM12Q96EX1 92 aa10.18□□□□□ -0.78
SEC13-216ENST00000479868 GRAMD2BQ96HH9 432 aa10.18□□□□□ -0.78
SEC13-216ENST00000479868 PIMREGQ9BSJ6 248 aa10.18□□□□□ -0.78
SEC13-216ENST00000479868 PRDM13Q9H4Q3 707 aa10.18□□□□□ -0.78
SEC13-216ENST00000479868 FBXL7Q9UJT9 491 aa10.18□□□□□ -0.78
SEC13-216ENST00000479868 LINC01548A6NM66 108 aa10.17□□□□□ -0.78
SEC13-216ENST00000479868 IGLV2-11P01706 119 aa10.17□□□□□ -0.78
SEC13-216ENST00000479868 CTSGP08311 255 aa10.17□□□□□ -0.78
SEC13-216ENST00000479868 CRISP2P16562 243 aa10.17□□□□□ -0.78
SEC13-216ENST00000479868 LINC00310P59036 64 aa10.17□□□□□ -0.78
SEC13-216ENST00000479868 PAX8Q06710 450 aa10.17□□□□□ -0.78
SEC13-216ENST00000479868 GOLT1AQ6ZVE7 132 aa10.17□□□□□ -0.78
SEC13-216ENST00000479868 AMY1AP04745 511 aa10.17□□□□□ -0.78
SEC13-216ENST00000479868 GZMBP10144 247 aa10.17□□□□□ -0.78
SEC13-216ENST00000479868 RAB4BP61018 213 aa10.17□□□□□ -0.78
SEC13-216ENST00000479868 RPL19P84098 196 aaKnown RBP10.17□□□□□ -0.78
SEC13-216ENST00000479868 JOSD1Q15040 202 aaPredicted RBP10.17□□□□□ -0.78
SEC13-216ENST00000479868 WDR73Q6P4I2 378 aa10.17□□□□□ -0.78
SEC13-216ENST00000479868 UNQ5815/PRO19632Q6UWF5 114 aa10.17□□□□□ -0.78
SEC13-216ENST00000479868 SIGLEC15Q6ZMC9 328 aa10.17□□□□□ -0.78
SEC13-216ENST00000479868 NUP35Q8NFH5 326 aa10.17□□□□□ -0.78
SEC13-216ENST00000479868 CMTM2Q8TAZ6 248 aa10.17□□□□□ -0.78
SEC13-216ENST00000479868 C10orf105Q8TEF2 133 aa10.17□□□□□ -0.78
SEC13-216ENST00000479868 CHRDL1Q9BU40 450 aa10.17□□□□□ -0.78
SEC13-216ENST00000479868 CSMD2Q7Z408 3487 aa10.16□□□□□ -0.78
SEC13-216ENST00000479868 F2Z2F3 143 aa10.16□□□□□ -0.78
SEC13-216ENST00000479868 MT-ND6P03923 174 aa10.16□□□□□ -0.78
SEC13-216ENST00000479868 KIAA1644Q3SXP7 199 aa10.16□□□□□ -0.78
SEC13-216ENST00000479868 Q86TA4 180 aa10.16□□□□□ -0.78
SEC13-216ENST00000479868 FAM110DQ8TAY7 271 aaPredicted RBP10.16□□□□□ -0.78
SEC13-216ENST00000479868 ZNF414Q96IQ9 312 aa10.16□□□□□ -0.78
SEC13-216ENST00000479868 NEU1Q99519 415 aa10.16□□□□□ -0.78
SEC13-216ENST00000479868 ODF1Q14990 250 aa10.16□□□□□ -0.78
SEC13-216ENST00000479868 BRD3OSQ6XYD6 125 aa10.16□□□□□ -0.78
SEC13-216ENST00000479868 TSKUQ8WUA8 353 aa10.16□□□□□ -0.78
SEC13-216ENST00000479868 C19orf71A6NCJ1 209 aa10.15□□□□□ -0.78
SEC13-216ENST00000479868 HIGD1CA8MV81 97 aa10.15□□□□□ -0.78
SEC13-216ENST00000479868 VWC2LB2RUY7 222 aa10.15□□□□□ -0.78
SEC13-216ENST00000479868 G3V318 75 aa10.15□□□□□ -0.78
SEC13-216ENST00000479868 ATP5J2P56134 94 aa10.15□□□□□ -0.78
SEC13-216ENST00000479868 C15orf32Q32M92 178 aa10.15□□□□□ -0.78
SEC13-216ENST00000479868 DNLZQ5SXM8 178 aa10.15□□□□□ -0.78
SEC13-216ENST00000479868 TMEM219Q86XT9 240 aa10.15□□□□□ -0.78
SEC13-216ENST00000479868 CIARTQ8N365 385 aaPredicted RBP10.15□□□□□ -0.78
SEC13-216ENST00000479868 PRSS22Q9GZN4 317 aa10.15□□□□□ -0.78
SEC13-216ENST00000479868 RNF24Q9Y225 148 aa10.15□□□□□ -0.78
SEC13-216ENST00000479868 IGHV4-30-2A0A087WSY4 118 aa10.15□□□□□ -0.79
SEC13-216ENST00000479868 TRAV40A0A0B4J280 105 aa10.15□□□□□ -0.79
SEC13-216ENST00000479868 IGHV3-35A0A0C4DH35 117 aa10.15□□□□□ -0.79
SEC13-216ENST00000479868 SERF1AO75920 110 aa10.15□□□□□ -0.79
SEC13-216ENST00000479868 COTL1Q14019 142 aa10.15□□□□□ -0.79
SEC13-216ENST00000479868 COX19Q49B96 90 aa10.15□□□□□ -0.79
SEC13-216ENST00000479868 PRNTQ86SH4 94 aa10.15□□□□□ -0.79
SEC13-216ENST00000479868 OR5R1Q8NH85 324 aa10.15□□□□□ -0.79
SEC13-216ENST00000479868 IGHV3OR16-8A0A075B7F1 116 aa10.14□□□□□ -0.79
SEC13-216ENST00000479868 GOSR1O95249 250 aa10.14□□□□□ -0.79
SEC13-216ENST00000479868 HLA-DQA1P01909 254 aa10.14□□□□□ -0.79
SEC13-216ENST00000479868 PRB1P04280 392 aa10.14□□□□□ -0.79
SEC13-216ENST00000479868 C5orf56Q8N8D9 126 aa10.14□□□□□ -0.79
SEC13-216ENST00000479868 ASCL2Q99929 193 aa10.14□□□□□ -0.79
SEC13-216ENST00000479868 RPP21Q9H633 154 aaKnown RBP10.14□□□□□ -0.79
SEC13-216ENST00000479868 GNB4Q9HAV0 340 aa10.14□□□□□ -0.79
SEC13-216ENST00000479868 ZNF331Q9NQX6 463 aaPredicted RBP10.14□□□□□ -0.79
SEC13-216ENST00000479868 IGHV1-69DA0A0B4J2H0 117 aa10.14□□□□□ -0.79
SEC13-216ENST00000479868 M0R3E3 92 aa10.14□□□□□ -0.79
SEC13-216ENST00000479868 BMPR1BO00238 502 aa10.14□□□□□ -0.79
SEC13-216ENST00000479868 IGHV1-69P01742 117 aa10.14□□□□□ -0.79
SEC13-216ENST00000479868 RHOGP84095 191 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms