RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 PQLC2Q6ZP29 291 aa5.12□□□□□ -1.59
VAMP3-202ENST00000470357 ZNF329Q86UD4 541 aa5.12□□□□□ -1.59
VAMP3-202ENST00000470357 RPP25LQ8N5L8 163 aaKnown RBP5.12□□□□□ -1.59
VAMP3-202ENST00000470357 C3orf56Q8N813 242 aa5.12□□□□□ -1.59
VAMP3-202ENST00000470357 OR5AU1Q8NGC0 362 aa5.12□□□□□ -1.59
VAMP3-202ENST00000470357 MYOZ3Q8TDC0 251 aa5.12□□□□□ -1.59
VAMP3-202ENST00000470357 SFT2D1Q8WV19 159 aa5.12□□□□□ -1.59
VAMP3-202ENST00000470357 TMEM190Q8WZ59 177 aa5.12□□□□□ -1.59
VAMP3-202ENST00000470357 RAB24Q969Q5 203 aa5.12□□□□□ -1.59
VAMP3-202ENST00000470357 MARC2Q969Z3 335 aa5.12□□□□□ -1.59
VAMP3-202ENST00000470357 RNF125Q96EQ8 232 aa5.12□□□□□ -1.59
VAMP3-202ENST00000470357 NARS2Q96I59 477 aaKnown RBP5.12□□□□□ -1.59
VAMP3-202ENST00000470357 KRTAP4-2Q9BYR5 136 aa5.12□□□□□ -1.59
VAMP3-202ENST00000470357 MAP1LC3BQ9GZQ8 125 aa5.12□□□□□ -1.59
VAMP3-202ENST00000470357 HRH4Q9H3N8 390 aa5.12□□□□□ -1.59
VAMP3-202ENST00000470357 SMDT1Q9H4I9 107 aa5.12□□□□□ -1.59
VAMP3-202ENST00000470357 GNB4Q9HAV0 340 aa5.12□□□□□ -1.59
VAMP3-202ENST00000470357 TECRQ9NZ01 308 aaKnown RBP5.12□□□□□ -1.59
VAMP3-202ENST00000470357 PEF1Q9UBV8 284 aaKnown RBP5.12□□□□□ -1.59
VAMP3-202ENST00000470357 HIGD1AQ9Y241 93 aa5.12□□□□□ -1.59
VAMP3-202ENST00000470357 WI2-2373I1.2A0A1W2PRP0 233 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 CLPSL1A2RUU4 121 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 J3KRW8 73 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 NDUFA4O00483 81 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 IL4P05112 153 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 LGALS1P09382 135 aaKnown RBP5.11□□□□□ -1.59
VAMP3-202ENST00000470357 C8orf88P0DMB2 117 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 ORM2P19652 201 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 ZP3P21754 424 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 BMI1P35226 326 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 CDX1P47902 265 aaPredicted RBP5.11□□□□□ -1.59
VAMP3-202ENST00000470357 LYZP61626 148 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 FAM106AQ4KMX7 169 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 HIST2H2BDQ6DRA6 164 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 CFAP161Q6P656 301 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 UQCC3Q6UW78 93 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 EIF4E3Q8N5X7 224 aaKnown RBP5.11□□□□□ -1.59
VAMP3-202ENST00000470357 ZNF491Q8N8L2 437 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 OR1B1Q8NGR6 318 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 LINC01006Q8NI28 216 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 TXNDC17Q9BRA2 123 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 ZNF747Q9BV97 191 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 KLK15Q9H2R5 256 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 VSIRQ9H7M9 311 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 SLC25A22Q9H936 323 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 MANBALQ9NQG1 85 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 TMEM167BQ9NRX6 74 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 RABAC1Q9UI14 185 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 PUS1Q9Y606 427 aaKnown RBP eCLIP5.11□□□□□ -1.59
VAMP3-202ENST00000470357 RFNGQ9Y644 331 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 ARL2-SNX15V9GYD0 113 aa5.11□□□□□ -1.59
VAMP3-202ENST00000470357 A0A1W2PS18 150 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 NDUFS6O75380 124 aaKnown RBP5.1□□□□□ -1.59
VAMP3-202ENST00000470357 IGHV3-23P01764 117 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 HSPB1P04792 205 aaKnown RBP5.1□□□□□ -1.59
VAMP3-202ENST00000470357 STAG3L2P0CL84 134 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 STAG3L3P0CL85 134 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 GATA2P23769 480 aaPredicted RBP5.1□□□□□ -1.59
VAMP3-202ENST00000470357 FHITP49789 147 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 PEA15Q15121 130 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 ZNF726P1Q15940 193 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 RPEL1Q2QD12 228 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 AWAT1Q58HT5 328 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 GCSAMLQ5JQS6 135 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 LCN15Q6UWW0 184 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 LINC00305Q7Z4B0 112 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 COMMD7Q86VX2 200 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 GPHB5Q86YW7 130 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 IL17DQ8TAD2 202 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 SUN5Q8TC36 379 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 C4orf3Q8WVX3 66 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 TMEM37Q8WXS4 190 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 GRAMD2BQ96HH9 432 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 GPR82Q96P67 336 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 METTL26Q96S19 204 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 SHANK2-AS3Q9BTD1 123 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 CHRDL1Q9BU40 450 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 NKX6-2Q9C056 277 aaPredicted RBP5.1□□□□□ -1.59
VAMP3-202ENST00000470357 TMEM231Q9H6L2 316 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 SEPSECSQ9HD40 501 aaKnown RBP5.1□□□□□ -1.59
VAMP3-202ENST00000470357 MRPL27Q9P0M9 148 aaKnown RBP5.1□□□□□ -1.59
VAMP3-202ENST00000470357 DOK5Q9P104 306 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 S4R3C0 116 aa5.1□□□□□ -1.59
VAMP3-202ENST00000470357 RBFOX3A6NFN3 312 aa5.09□□□□□ -1.59
VAMP3-202ENST00000470357 K7EMT4 169 aa5.09□□□□□ -1.59
VAMP3-202ENST00000470357 OR7C2O60412 319 aa5.09□□□□□ -1.59
VAMP3-202ENST00000470357 IGHV3-11P01762 117 aa5.09□□□□□ -1.59
VAMP3-202ENST00000470357 ARL14EPLP0DKL9 152 aa5.09□□□□□ -1.59
VAMP3-202ENST00000470357 RPL7P18124 248 aaKnown RBP5.09□□□□□ -1.59
VAMP3-202ENST00000470357 NPPCP23582 126 aa5.09□□□□□ -1.59
VAMP3-202ENST00000470357 GCHFRP30047 84 aa5.09□□□□□ -1.59
VAMP3-202ENST00000470357 MEOX2P50222 304 aa5.09□□□□□ -1.59
VAMP3-202ENST00000470357 PROK1P58294 105 aa5.09□□□□□ -1.59
VAMP3-202ENST00000470357 DEFA5Q01523 94 aa5.09□□□□□ -1.59
VAMP3-202ENST00000470357 KIAA0141Q14154 515 aaPredicted RBP5.09□□□□□ -1.59
VAMP3-202ENST00000470357 GUK1Q16774 197 aa5.09□□□□□ -1.59
VAMP3-202ENST00000470357 KHDC1LQ5JSQ8 128 aa5.09□□□□□ -1.59
VAMP3-202ENST00000470357 TOR2AQ5JU69 321 aa5.09□□□□□ -1.59
VAMP3-202ENST00000470357 C1orf194Q5T5A4 169 aa5.09□□□□□ -1.59
VAMP3-202ENST00000470357 TOMM20LQ6UXN7 152 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms