RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 IGHV3-7P01780 117 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 CECR9P0C854 216 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 ERHP84090 104 aaKnown RBP7.68□□□□□ -1.18
HDAC3-205ENST00000469550 LDLRAD2Q5SZI1 272 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 C10orf113Q5VZT2 155 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 VPS25Q9BRG1 176 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 MAP1LC3CQ9BXW4 147 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 NDUFA4L2Q9NRX3 87 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 PEF1Q9UBV8 284 aaKnown RBP7.68□□□□□ -1.18
HDAC3-205ENST00000469550 EPDR1Q9UM22 224 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 VPS13CQ709C8 3753 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 TCRBV4S1A1TA0A5B7 111 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 C19orf71A6NCJ1 209 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 M0QZ24 198 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 PSG1P11464 419 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 KRTAP1-1Q07627 177 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 MLANAQ16655 118 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 PATE2Q6UY27 113 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 ZNF841Q6ZN19 808 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 THAP8Q8NA92 274 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 ZNRF1Q8ND25 227 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 OSR1Q8TAX0 266 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-205ENST00000469550 H1FXQ92522 213 aaKnown RBP7.68□□□□□ -1.18
HDAC3-205ENST00000469550 ZNF430Q9H8G1 570 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-205ENST00000469550 HSPB8Q9UJY1 196 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 MUC21A0A0G2JKD1 596 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 MUC21A0A140T8X8 626 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 hDV102S1A0JD36 115 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 OR2T8A6NH00 312 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 OVOL3O00110 214 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 CORTO00230 105 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 SMAD7O15105 426 aaKnown RBP7.67□□□□□ -1.18
HDAC3-205ENST00000469550 CT45A6P0DMU7 189 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 CT45A5P0DMU8 189 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 CT45A7P0DMV0 189 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 PYYP10082 97 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 MUC21Q5SSG8 566 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 UTF1Q5T230 341 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 AMMECR1LQ6DCA0 310 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 ETFRF1Q6IPR1 90 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 PRR27Q6MZM9 219 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 FAM169BQ8N8A8 192 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 OR2Z1Q8NG97 314 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 SPATA3Q8NHX4 192 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 LEAP2Q969E1 77 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 ST6GALNAC6Q969X2 333 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 CSTL1Q9H114 145 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 HIVEP2P31629 2446 aa7.67□□□□□ -1.18
HDAC3-205ENST00000469550 LOC102724200A0A096LPH7 203 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-205ENST00000469550 INAFM1C9JVW0 142 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 SEC11AP67812 179 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 PSG9Q00887 426 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 LINC01545Q5VT33 79 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 RBPMS2Q6ZRY4 209 aaKnown RBP7.66□□□□□ -1.18
HDAC3-205ENST00000469550 SLC25A48Q6ZT89 311 aaKnown RBP7.66□□□□□ -1.18
HDAC3-205ENST00000469550 PDPNQ86YL7 162 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 DPF1Q92782 380 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 FMC1Q96HJ9 113 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 MDFIQ99750 246 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 FZR1Q9UM11 496 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 CR1P17927 2039 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 ANK3Q12955 4377 aaKnown RBP7.66□□□□□ -1.18
HDAC3-205ENST00000469550 IGHV3OR15-7A0A075B7D8 119 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 GAGE12BA1L429 117 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 CBY3A6NI87 242 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 SH2D7A6NKC9 451 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-205ENST00000469550 NPIPB6E9PJ23 425 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 PLAUP00749 431 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 IGKV1-16P04430 117 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 SAA1P0DJI8 122 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-205ENST00000469550 COX8AP10176 69 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 GPR183P32249 361 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 SUB1P53999 127 aaKnown RBP eCLIP7.66□□□□□ -1.18
HDAC3-205ENST00000469550 ATP5J2P56134 94 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 LINC00173Q6ZV60 143 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 TCF24Q7RTU0 167 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 WFDC8Q8IUA0 241 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 OR4A5Q8NH83 315 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 GTSF1Q8WW33 167 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 TMEM190Q8WZ59 177 aa7.66□□□□□ -1.18
HDAC3-205ENST00000469550 IGKV1D-37A0A075B6S9 117 aa7.65□□□□□ -1.18
HDAC3-205ENST00000469550 HAX1O00165 279 aa7.65□□□□□ -1.18
HDAC3-205ENST00000469550 CRLF1O75462 422 aa7.65□□□□□ -1.18
HDAC3-205ENST00000469550 MOSP00540 346 aa7.65□□□□□ -1.18
HDAC3-205ENST00000469550 LTAP01374 205 aa7.65□□□□□ -1.18
HDAC3-205ENST00000469550 P01737 135 aa7.65□□□□□ -1.18
HDAC3-205ENST00000469550 IGLC1P0CG04 106 aa7.65□□□□□ -1.18
HDAC3-205ENST00000469550 FOXA3P55318 350 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-205ENST00000469550 ASPHD1Q5U4P2 390 aa7.65□□□□□ -1.18
HDAC3-205ENST00000469550 ZCCHC24Q8N2G6 241 aaKnown RBP7.65□□□□□ -1.18
HDAC3-205ENST00000469550 NGBQ9NPG2 151 aa7.65□□□□□ -1.18
HDAC3-205ENST00000469550 RPUSD1Q9UJJ7 312 aaKnown RBP7.65□□□□□ -1.18
HDAC3-205ENST00000469550 FBN3Q75N90 2809 aa7.65□□□□□ -1.19
HDAC3-205ENST00000469550 TLN2Q9Y4G6 2542 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 IGHV1-18A0A0C4DH31 117 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 SLC25A5P05141 298 aaKnown RBP7.64□□□□□ -1.19
HDAC3-205ENST00000469550 GATA4P43694 442 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 GNG5P63218 68 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 TMEM177Q53S58 311 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 ZNF833PQ6ZTB9 187 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms