RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 NEGR1Q7Z3B1 354 aa6.8□□□□□ -1.32
HDAC3-203ENST00000467533 ARRDC1Q8N5I2 433 aa6.8□□□□□ -1.32
HDAC3-203ENST00000467533 OR8A1Q8NGG7 326 aa6.8□□□□□ -1.32
HDAC3-203ENST00000467533 OR5H6Q8NGV6 325 aa6.8□□□□□ -1.32
HDAC3-203ENST00000467533 OR52E5Q8NH55 327 aa6.8□□□□□ -1.32
HDAC3-203ENST00000467533 RBPMSQ93062 196 aaKnown RBP6.8□□□□□ -1.32
HDAC3-203ENST00000467533 C20orf144Q9BQM9 153 aa6.8□□□□□ -1.32
HDAC3-203ENST00000467533 CHAC1Q9BUX1 264 aa6.8□□□□□ -1.32
HDAC3-203ENST00000467533 DNAJC4Q9NNZ3 241 aa6.8□□□□□ -1.32
HDAC3-203ENST00000467533 C8orf4Q9NR00 106 aa6.8□□□□□ -1.32
HDAC3-203ENST00000467533 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-203ENST00000467533 A0A0G2JRQ6 117 aa6.79□□□□□ -1.32
HDAC3-203ENST00000467533 CEBPZOSA8MTT3 80 aa6.79□□□□□ -1.32
HDAC3-203ENST00000467533 HRH1P35367 487 aa6.79□□□□□ -1.32
HDAC3-203ENST00000467533 DAZ2Q13117 558 aaKnown RBP6.79□□□□□ -1.32
HDAC3-203ENST00000467533 PSG3Q16557 428 aa6.79□□□□□ -1.32
HDAC3-203ENST00000467533 LINC01620Q4KN68 170 aa6.79□□□□□ -1.32
HDAC3-203ENST00000467533 OR1B1Q8NGR6 318 aa6.79□□□□□ -1.32
HDAC3-203ENST00000467533 CIRBP-AS1Q8TBR5 109 aa6.79□□□□□ -1.32
HDAC3-203ENST00000467533 TMEM170AQ8WVE7 144 aa6.79□□□□□ -1.32
HDAC3-203ENST00000467533 TP53RKQ96S44 253 aa6.79□□□□□ -1.32
HDAC3-203ENST00000467533 NDUFB11Q9NX14 153 aa6.79□□□□□ -1.32
HDAC3-203ENST00000467533 FUT9Q9Y231 359 aa6.79□□□□□ -1.32
HDAC3-203ENST00000467533 TPRKBQ9Y3C4 175 aa6.79□□□□□ -1.32
HDAC3-203ENST00000467533 TRGV1A0A0A0MS02 117 aa6.78□□□□□ -1.32
HDAC3-203ENST00000467533 SNRPGP15A8MWD9 76 aa6.78□□□□□ -1.32
HDAC3-203ENST00000467533 IGHV3-53P01767 116 aa6.78□□□□□ -1.32
HDAC3-203ENST00000467533 HLA-DMAP28067 261 aa6.78□□□□□ -1.32
HDAC3-203ENST00000467533 ZNF415Q09FC8 603 aa6.78□□□□□ -1.32
HDAC3-203ENST00000467533 ACOT6Q3I5F7 207 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-203ENST00000467533 GFI1BQ5VTD9 330 aa6.78□□□□□ -1.32
HDAC3-203ENST00000467533 NOXA1Q86UR1 476 aa6.78□□□□□ -1.32
HDAC3-203ENST00000467533 SLC35E1Q96K37 410 aa6.78□□□□□ -1.32
HDAC3-203ENST00000467533 VCX3BQ9H321 246 aa6.78□□□□□ -1.32
HDAC3-203ENST00000467533 PRO0255Q9UI72 69 aa6.78□□□□□ -1.32
HDAC3-203ENST00000467533 ANAPC10Q9UM13 185 aa6.78□□□□□ -1.32
HDAC3-203ENST00000467533 IGKV1D-37A0A075B6S9 117 aa6.77□□□□□ -1.33
HDAC3-203ENST00000467533 GABARAPH6UMI1 98 aa6.77□□□□□ -1.33
HDAC3-203ENST00000467533 GABARAPO95166 117 aa6.77□□□□□ -1.33
HDAC3-203ENST00000467533 PGAM2P15259 253 aa6.77□□□□□ -1.33
HDAC3-203ENST00000467533 SRIP30626 198 aa6.77□□□□□ -1.33
HDAC3-203ENST00000467533 SCAND1P57086 179 aa6.77□□□□□ -1.33
HDAC3-203ENST00000467533 ASAH1Q13510 395 aa6.77□□□□□ -1.33
HDAC3-203ENST00000467533 WFDC2Q14508 124 aa6.77□□□□□ -1.33
HDAC3-203ENST00000467533 CCDC190Q86UF4 302 aa6.77□□□□□ -1.33
HDAC3-203ENST00000467533 NRG4Q8WWG1 115 aa6.77□□□□□ -1.33
HDAC3-203ENST00000467533 DAZAP1Q96EP5 407 aaKnown RBP6.77□□□□□ -1.33
HDAC3-203ENST00000467533 GPR82Q96P67 336 aa6.77□□□□□ -1.33
HDAC3-203ENST00000467533 PARD6GQ9BYG4 376 aaPredicted RBP6.77□□□□□ -1.33
HDAC3-203ENST00000467533 VCXQ9H320 206 aa6.77□□□□□ -1.33
HDAC3-203ENST00000467533 C3orf85A0A1B0GTC6 90 aa6.76□□□□□ -1.33
HDAC3-203ENST00000467533 J3KRW8 73 aa6.76□□□□□ -1.33
HDAC3-203ENST00000467533 LECT2O14960 151 aa6.76□□□□□ -1.33
HDAC3-203ENST00000467533 PRAF2O60831 178 aa6.76□□□□□ -1.33
HDAC3-203ENST00000467533 GYPEP15421 78 aa6.76□□□□□ -1.33
HDAC3-203ENST00000467533 PI3P19957 117 aa6.76□□□□□ -1.33
HDAC3-203ENST00000467533 CRYBA4P53673 196 aa6.76□□□□□ -1.33
HDAC3-203ENST00000467533 UCP3P55916 312 aa6.76□□□□□ -1.33
HDAC3-203ENST00000467533 NMSQ5H8A3 153 aa6.76□□□□□ -1.33
HDAC3-203ENST00000467533 OR4D5Q8NGN0 318 aa6.76□□□□□ -1.33
HDAC3-203ENST00000467533 PCNPQ8WW12 178 aaKnown RBP6.76□□□□□ -1.33
HDAC3-203ENST00000467533 IL22RA2Q969J5 263 aa6.76□□□□□ -1.33
HDAC3-203ENST00000467533 C8orf49Q96NF6 230 aa6.76□□□□□ -1.33
HDAC3-203ENST00000467533 DUSP21Q9H596 190 aa6.76□□□□□ -1.33
HDAC3-203ENST00000467533 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-203ENST00000467533 TNXBP22105 4242 aa6.76□□□□□ -1.33
HDAC3-203ENST00000467533 NAT1P18440 290 aa6.75□□□□□ -1.33
HDAC3-203ENST00000467533 RCVRNP35243 200 aa6.75□□□□□ -1.33
HDAC3-203ENST00000467533 PIGPP57054 158 aa6.75□□□□□ -1.33
HDAC3-203ENST00000467533 RND3P61587 244 aa6.75□□□□□ -1.33
HDAC3-203ENST00000467533 SLAQ13239 276 aa6.75□□□□□ -1.33
HDAC3-203ENST00000467533 SP6Q3SY56 376 aa6.75□□□□□ -1.33
HDAC3-203ENST00000467533 PRSS48Q7RTY5 328 aa6.75□□□□□ -1.33
HDAC3-203ENST00000467533 ZNF680Q8NEM1 530 aa6.75□□□□□ -1.33
HDAC3-203ENST00000467533 ST6GAL2Q96JF0 529 aa6.75□□□□□ -1.33
HDAC3-203ENST00000467533 GSN-AS1Q9NRJ2 163 aa6.75□□□□□ -1.33
HDAC3-203ENST00000467533 TXNL4BQ9NX01 149 aaKnown RBP6.75□□□□□ -1.33
HDAC3-203ENST00000467533 CACNG5Q9UF02 275 aa6.75□□□□□ -1.33
HDAC3-203ENST00000467533 HHLA3Q9XRX5 114 aa6.75□□□□□ -1.33
HDAC3-203ENST00000467533 TMEM56-RWDD3S4R434 201 aa6.75□□□□□ -1.33
HDAC3-203ENST00000467533 TRAV12-3A0A0B4J271 114 aa6.74□□□□□ -1.33
HDAC3-203ENST00000467533 IGHV3-38A0A0C4DH36 116 aa6.74□□□□□ -1.33
HDAC3-203ENST00000467533 IBA57-AS1B1ANH7 110 aa6.74□□□□□ -1.33
HDAC3-203ENST00000467533 E5RGE8 158 aa6.74□□□□□ -1.33
HDAC3-203ENST00000467533 K7EQD1 137 aa6.74□□□□□ -1.33
HDAC3-203ENST00000467533 CXCL3P19876 107 aa6.74□□□□□ -1.33
HDAC3-203ENST00000467533 GATA2P23769 480 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-203ENST00000467533 MXD1Q05195 221 aa6.74□□□□□ -1.33
HDAC3-203ENST00000467533 AARDQ4LEZ3 155 aa6.74□□□□□ -1.33
HDAC3-203ENST00000467533 FAM219AQ8IW50 185 aa6.74□□□□□ -1.33
HDAC3-203ENST00000467533 LRRC20Q8TCA0 184 aa6.74□□□□□ -1.33
HDAC3-203ENST00000467533 TMEM37Q8WXS4 190 aa6.74□□□□□ -1.33
HDAC3-203ENST00000467533 RPUSD4Q96CM3 377 aaKnown RBP6.74□□□□□ -1.33
HDAC3-203ENST00000467533 ZNF486Q96H40 463 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-203ENST00000467533 TRGV9Q99603 122 aa6.74□□□□□ -1.33
HDAC3-203ENST00000467533 PYGO2Q9BRQ0 406 aa6.74□□□□□ -1.33
HDAC3-203ENST00000467533 TMEM147Q9BVK8 224 aa6.74□□□□□ -1.33
HDAC3-203ENST00000467533 SLC45A2Q9UMX9 530 aa6.74□□□□□ -1.33
HDAC3-203ENST00000467533 CCNKO75909 580 aa6.73□□□□□ -1.33
HDAC3-203ENST00000467533 IGLV2-11P01706 119 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms