RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 RSPO1Q2MKA7 263 aaPredicted RBP12.88□□□□□ -0.35
SMC4-204ENST00000462787 VWC2Q2TAL6 325 aa12.88□□□□□ -0.35
SMC4-204ENST00000462787 FANCMQ8IYD8 2048 aa12.88□□□□□ -0.35
SMC4-204ENST00000462787 IGHV3-49A0A0A0MS15 119 aa12.88□□□□□ -0.35
SMC4-204ENST00000462787 H0YJW9 148 aa12.88□□□□□ -0.35
SMC4-204ENST00000462787 SNRPD3P62318 126 aaKnown RBP12.88□□□□□ -0.35
SMC4-204ENST00000462787 ETDBQ3ZM63 59 aa12.88□□□□□ -0.35
SMC4-204ENST00000462787 IGKV2-40A0A087WW87 121 aaPredicted RBP12.87□□□□□ -0.35
SMC4-204ENST00000462787 IGKV2D-40P01614 121 aaPredicted RBP12.87□□□□□ -0.35
SMC4-204ENST00000462787 AZU1P20160 251 aa12.87□□□□□ -0.35
SMC4-204ENST00000462787 DEFB123Q8N688 67 aa12.87□□□□□ -0.35
SMC4-204ENST00000462787 Q6ZVH6 145 aa12.87□□□□□ -0.35
SMC4-204ENST00000462787 TDRG1Q3Y452 100 aa12.87□□□□□ -0.35
SMC4-204ENST00000462787 ATP1A1-AS1Q5TC04 95 aa12.87□□□□□ -0.35
SMC4-204ENST00000462787 APOBEC3AP31941 199 aaPredicted RBP12.87□□□□□ -0.35
SMC4-204ENST00000462787 FAM104BQ5XKR9 115 aa12.87□□□□□ -0.35
SMC4-204ENST00000462787 DYNLRB2Q8TF09 96 aa12.87□□□□□ -0.35
SMC4-204ENST00000462787 SSC4DQ8WTU2 575 aa12.87□□□□□ -0.35
SMC4-204ENST00000462787 ZNF48Q96MX3 618 aaPredicted RBP12.87□□□□□ -0.35
SMC4-204ENST00000462787 PLXNA2O75051 1894 aa12.87□□□□□ -0.35
SMC4-204ENST00000462787 HEATR5AQ86XA9 2040 aa12.87□□□□□ -0.35
SMC4-204ENST00000462787 MLANAQ16655 118 aa12.86□□□□□ -0.35
SMC4-204ENST00000462787 PPDPFLQ8WWR9 84 aa12.86□□□□□ -0.35
SMC4-204ENST00000462787 RNASE4P34096 147 aaKnown RBP12.86□□□□□ -0.35
SMC4-204ENST00000462787 TMEM155Q4W5P6 130 aa12.86□□□□□ -0.35
SMC4-204ENST00000462787 Q8NFD4 153 aa12.86□□□□□ -0.35
SMC4-204ENST00000462787 MED12Q93074 2177 aa12.86□□□□□ -0.35
SMC4-204ENST00000462787 WNT2P09544 360 aa12.86□□□□□ -0.35
SMC4-204ENST00000462787 TMEM75Q8N9X5 138 aa12.86□□□□□ -0.35
SMC4-204ENST00000462787 TRBV20-1A0A075B6N2 111 aa12.85□□□□□ -0.35
SMC4-204ENST00000462787 ZCCHC24Q8N2G6 241 aaKnown RBP12.85□□□□□ -0.35
SMC4-204ENST00000462787 LSM4Q9Y4Z0 139 aaKnown RBP12.85□□□□□ -0.35
SMC4-204ENST00000462787 PHF3Q92576 2039 aaKnown RBP12.85□□□□□ -0.35
SMC4-204ENST00000462787 IGHV3OR16-8A0A075B7F1 116 aa12.85□□□□□ -0.35
SMC4-204ENST00000462787 FAM27E3Q08E93 113 aa12.85□□□□□ -0.35
SMC4-204ENST00000462787 TAL2Q16559 108 aa12.85□□□□□ -0.35
SMC4-204ENST00000462787 SNRNP200O75643 2136 aaKnown RBP12.85□□□□□ -0.35
SMC4-204ENST00000462787 CLEC19AQ6UXS0 136 aa12.85□□□□□ -0.35
SMC4-204ENST00000462787 PLEKHB2Q96CS7 222 aa12.85□□□□□ -0.35
SMC4-204ENST00000462787 RNF5Q99942 180 aa12.85□□□□□ -0.35
SMC4-204ENST00000462787 TRGV3P03979 118 aa12.84□□□□□ -0.35
SMC4-204ENST00000462787 PRSS46E5RG02 174 aa12.84□□□□□ -0.35
SMC4-204ENST00000462787 SMKR1H3BMG3 65 aa12.84□□□□□ -0.35
SMC4-204ENST00000462787 IGKV1D-17A0A075B6S4 117 aa12.84□□□□□ -0.35
SMC4-204ENST00000462787 M0R2P5 195 aa12.84□□□□□ -0.35
SMC4-204ENST00000462787 IGHV1-46P01743 117 aa12.84□□□□□ -0.35
SMC4-204ENST00000462787 ZFP36L1Q07352 338 aaKnown RBP12.84□□□□□ -0.35
SMC4-204ENST00000462787 PDE6HQ13956 83 aa12.84□□□□□ -0.35
SMC4-204ENST00000462787 FDCSPQ8NFU4 85 aa12.84□□□□□ -0.35
SMC4-204ENST00000462787 MOB4Q9Y3A3 225 aa12.84□□□□□ -0.35
SMC4-204ENST00000462787 TNFRSF6BO95407 300 aa12.84□□□□□ -0.35
SMC4-204ENST00000462787 CFHR2P36980 270 aa12.84□□□□□ -0.35
SMC4-204ENST00000462787 TRAV40A0A0B4J280 105 aa12.83□□□□□ -0.35
SMC4-204ENST00000462787 RAX2Q96IS3 184 aa12.83□□□□□ -0.35
SMC4-204ENST00000462787 SPRR3Q9UBC9 169 aa12.83□□□□□ -0.35
SMC4-204ENST00000462787 KLF12Q9Y4X4 402 aa12.83□□□□□ -0.35
SMC4-204ENST00000462787 TMEM8BA6NDV4 472 aa12.83□□□□□ -0.36
SMC4-204ENST00000462787 C2orf82Q6UX34 121 aa12.83□□□□□ -0.36
SMC4-204ENST00000462787 DENND4AQ7Z401 1863 aa12.83□□□□□ -0.36
SMC4-204ENST00000462787 VGLL1Q99990 258 aa12.83□□□□□ -0.36
SMC4-204ENST00000462787 PRR20EP86478 221 aa12.83□□□□□ -0.36
SMC4-204ENST00000462787 PRR20CP86479 221 aa12.83□□□□□ -0.36
SMC4-204ENST00000462787 PRR20DP86480 221 aa12.83□□□□□ -0.36
SMC4-204ENST00000462787 PRR20BP86481 221 aa12.83□□□□□ -0.36
SMC4-204ENST00000462787 PRR20AP86496 221 aa12.83□□□□□ -0.36
SMC4-204ENST00000462787 OR13C6PQ8NH95 151 aa12.82□□□□□ -0.36
SMC4-204ENST00000462787 SCN5AQ14524 2016 aa12.82□□□□□ -0.36
SMC4-204ENST00000462787 SHANK2-AS3Q9BTD1 123 aa12.82□□□□□ -0.36
SMC4-204ENST00000462787 SPAARA0A1B0GVQ0 90 aa12.82□□□□□ -0.36
SMC4-204ENST00000462787 SRSF6Q13247 344 aaKnown RBP12.82□□□□□ -0.36
SMC4-204ENST00000462787 PLXND1Q9Y4D7 1925 aa12.82□□□□□ -0.36
SMC4-204ENST00000462787 OVOL1O14753 267 aa12.81□□□□□ -0.36
SMC4-204ENST00000462787 TCF20Q9UGU0 1960 aaKnown RBP12.81□□□□□ -0.36
SMC4-204ENST00000462787 DPH3P1Q9H4G8 78 aa12.81□□□□□ -0.36
SMC4-204ENST00000462787 BSPH1Q075Z2 132 aa12.81□□□□□ -0.36
SMC4-204ENST00000462787 IGKV1-16P04430 117 aa12.81□□□□□ -0.36
SMC4-204ENST00000462787 ZNF883P0CG24 379 aa12.81□□□□□ -0.36
SMC4-204ENST00000462787 CNTFRP26992 372 aa12.81□□□□□ -0.36
SMC4-204ENST00000462787 Q6ZSR3 168 aa12.81□□□□□ -0.36
SMC4-204ENST00000462787 TANC1Q9C0D5 1861 aa12.81□□□□□ -0.36
SMC4-204ENST00000462787 TMEM213A2RRL7 107 aa12.8□□□□□ -0.36
SMC4-204ENST00000462787 CD24P25063 80 aa12.8□□□□□ -0.36
SMC4-204ENST00000462787 TMEM200BQ69YZ2 307 aa12.8□□□□□ -0.36
SMC4-204ENST00000462787 CEND1Q8N111 149 aa12.8□□□□□ -0.36
SMC4-204ENST00000462787 NDUFA4L2Q9NRX3 87 aa12.8□□□□□ -0.36
SMC4-204ENST00000462787 ESPL1Q14674 2120 aa12.8□□□□□ -0.36
SMC4-204ENST00000462787 C9JAW5 83 aa12.8□□□□□ -0.36
SMC4-204ENST00000462787 CCL21O00585 134 aa12.8□□□□□ -0.36
SMC4-204ENST00000462787 PRSS57Q6UWY2 283 aa12.8□□□□□ -0.36
SMC4-204ENST00000462787 RNASE1P07998 156 aaKnown RBP12.8□□□□□ -0.36
SMC4-204ENST00000462787 ZNF747Q9BV97 191 aa12.8□□□□□ -0.36
SMC4-204ENST00000462787 Q8N8P6 123 aa12.8□□□□□ -0.36
SMC4-204ENST00000462787 SIGLEC8Q9NYZ4 499 aa12.8□□□□□ -0.36
SMC4-204ENST00000462787 TRAV12-3A0A0B4J271 114 aa12.79□□□□□ -0.36
SMC4-204ENST00000462787 TRBV7-9A0A0J9YWB2 115 aa12.79□□□□□ -0.36
SMC4-204ENST00000462787 NTN3O00634 580 aaPredicted RBP12.79□□□□□ -0.36
SMC4-204ENST00000462787 TIMM23O14925 209 aa12.79□□□□□ -0.36
SMC4-204ENST00000462787 GAFA1Q96PS6 74 aa12.79□□□□□ -0.36
SMC4-204ENST00000462787 CD7P09564 240 aa12.79□□□□□ -0.36
SMC4-204ENST00000462787 SRSF8Q9BRL6 282 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms