RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 MRPL32Q9BYC8 188 aaKnown RBP7.68□□□□□ -1.18
UPF2-204ENST00000460569 SEPSECSQ9HD40 501 aaKnown RBP7.68□□□□□ -1.18
UPF2-204ENST00000460569 RNF24Q9Y225 148 aa7.68□□□□□ -1.18
UPF2-204ENST00000460569 PKD1L1Q8TDX9 2849 aa7.67□□□□□ -1.18
UPF2-204ENST00000460569 TRAV5A0A0B4J249 113 aa7.67□□□□□ -1.18
UPF2-204ENST00000460569 IZUMO1RA6ND01 250 aa7.67□□□□□ -1.18
UPF2-204ENST00000460569 HELTA6NFD8 242 aa7.67□□□□□ -1.18
UPF2-204ENST00000460569 G3V4G9 280 aa7.67□□□□□ -1.18
UPF2-204ENST00000460569 WIPF1O43516 503 aa7.67□□□□□ -1.18
UPF2-204ENST00000460569 SEC11BP0C7V7 166 aa7.67□□□□□ -1.18
UPF2-204ENST00000460569 RPL7P18124 248 aaKnown RBP7.67□□□□□ -1.18
UPF2-204ENST00000460569 GALR1P47211 349 aa7.67□□□□□ -1.18
UPF2-204ENST00000460569 GUCA2BQ16661 112 aa7.67□□□□□ -1.18
UPF2-204ENST00000460569 TMEM41BQ5BJD5 291 aa7.67□□□□□ -1.18
UPF2-204ENST00000460569 MIR17HGQ75NE6 70 aa7.67□□□□□ -1.18
UPF2-204ENST00000460569 STXBP6Q8NFX7 210 aa7.67□□□□□ -1.18
UPF2-204ENST00000460569 FUT9Q9Y231 359 aa7.67□□□□□ -1.18
UPF2-204ENST00000460569 MGAM2Q2M2H8 2515 aa7.66□□□□□ -1.18
UPF2-204ENST00000460569 TRAV25A0A0B4J276 109 aa7.66□□□□□ -1.18
UPF2-204ENST00000460569 A0A1W2PPV4 95 aa7.66□□□□□ -1.18
UPF2-204ENST00000460569 EIF3GO75821 320 aaKnown RBP eCLIP7.66□□□□□ -1.18
UPF2-204ENST00000460569 CD5P06127 495 aa7.66□□□□□ -1.18
UPF2-204ENST00000460569 ATF4P18848 351 aaPredicted RBP7.66□□□□□ -1.18
UPF2-204ENST00000460569 TFPI2P48307 235 aa7.66□□□□□ -1.18
UPF2-204ENST00000460569 CDC34P49427 236 aaPredicted RBP7.66□□□□□ -1.18
UPF2-204ENST00000460569 SAMD5Q5TGI4 173 aa7.66□□□□□ -1.18
UPF2-204ENST00000460569 FAM90A2PQ658T7 463 aa7.66□□□□□ -1.18
UPF2-204ENST00000460569 EIF5AL1Q6IS14 154 aaKnown RBP7.66□□□□□ -1.18
UPF2-204ENST00000460569 BPIFA4PQ86YQ2 179 aa7.66□□□□□ -1.18
UPF2-204ENST00000460569 GBGT1Q8N5D6 347 aa7.66□□□□□ -1.18
UPF2-204ENST00000460569 GPR82Q96P67 336 aa7.66□□□□□ -1.18
UPF2-204ENST00000460569 RPRMQ9NS64 109 aa7.66□□□□□ -1.18
UPF2-204ENST00000460569 TRRAPQ9Y4A5 3859 aa7.66□□□□□ -1.18
UPF2-204ENST00000460569 ZNF785A8K8V0 405 aa7.65□□□□□ -1.18
UPF2-204ENST00000460569 DNASE2O00115 360 aaPredicted RBP7.65□□□□□ -1.18
UPF2-204ENST00000460569 TSPAN4O14817 238 aa7.65□□□□□ -1.18
UPF2-204ENST00000460569 HMGB3O15347 200 aaKnown RBP7.65□□□□□ -1.18
UPF2-204ENST00000460569 OR7C2O60412 319 aa7.65□□□□□ -1.18
UPF2-204ENST00000460569 TAS2R45P59539 299 aa7.65□□□□□ -1.18
UPF2-204ENST00000460569 PAFAH1B2P68402 229 aa7.65□□□□□ -1.18
UPF2-204ENST00000460569 KHDC3LQ587J8 217 aa7.65□□□□□ -1.18
UPF2-204ENST00000460569 WFDC3Q8IUB2 231 aa7.65□□□□□ -1.18
UPF2-204ENST00000460569 RPP25LQ8N5L8 163 aaKnown RBP7.65□□□□□ -1.18
UPF2-204ENST00000460569 SPAG8Q99932 426 aaPredicted RBP7.65□□□□□ -1.18
UPF2-204ENST00000460569 SLC25A2Q9BXI2 301 aa7.65□□□□□ -1.18
UPF2-204ENST00000460569 ACTR3CQ9C0K3 210 aaPredicted RBP7.65□□□□□ -1.18
UPF2-204ENST00000460569 MS4A6AQ9H2W1 248 aa7.65□□□□□ -1.18
UPF2-204ENST00000460569 NRN1Q9NPD7 142 aa7.65□□□□□ -1.18
UPF2-204ENST00000460569 OR4C46A6NHA9 309 aa7.64□□□□□ -1.19
UPF2-204ENST00000460569 UMAD1C9J7I0 102 aa7.64□□□□□ -1.19
UPF2-204ENST00000460569 PYYP10082 97 aa7.64□□□□□ -1.19
UPF2-204ENST00000460569 GP9P14770 177 aa7.64□□□□□ -1.19
UPF2-204ENST00000460569 FAM74A1Q5RGS3 127 aa7.64□□□□□ -1.19
UPF2-204ENST00000460569 FAM213BQ8TBF2 198 aa7.64□□□□□ -1.19
UPF2-204ENST00000460569 RAB24Q969Q5 203 aa7.64□□□□□ -1.19
UPF2-204ENST00000460569 FAM167A-AS1Q96KT0 104 aa7.64□□□□□ -1.19
UPF2-204ENST00000460569 PAXXQ9BUH6 204 aa7.64□□□□□ -1.19
UPF2-204ENST00000460569 PLA2G2EQ9NZK7 142 aa7.64□□□□□ -1.19
UPF2-204ENST00000460569 ZMAT5Q9UDW3 170 aaKnown RBP7.64□□□□□ -1.19
UPF2-204ENST00000460569 ZNF256Q9Y2P7 627 aaPredicted RBP7.64□□□□□ -1.19
UPF2-204ENST00000460569 CTXND1A0A1B0GTU2 59 aa7.63□□□□□ -1.19
UPF2-204ENST00000460569 H3BTX0 84 aa7.63□□□□□ -1.19
UPF2-204ENST00000460569 MRPS12O15235 138 aaKnown RBP7.63□□□□□ -1.19
UPF2-204ENST00000460569 SNRPCP09234 159 aaKnown RBP7.63□□□□□ -1.19
UPF2-204ENST00000460569 OR10J4P0C629 311 aa7.63□□□□□ -1.19
UPF2-204ENST00000460569 MEOX2P50222 304 aa7.63□□□□□ -1.19
UPF2-204ENST00000460569 KRTAP10-11P60412 298 aa7.63□□□□□ -1.19
UPF2-204ENST00000460569 UBE2L3P68036 154 aaKnown RBP7.63□□□□□ -1.19
UPF2-204ENST00000460569 EGFEM1PQ0D2K5 195 aa7.63□□□□□ -1.19
UPF2-204ENST00000460569 ZNF726P1Q15940 193 aa7.63□□□□□ -1.19
UPF2-204ENST00000460569 ALKAL2Q6UX46 152 aa7.63□□□□□ -1.19
UPF2-204ENST00000460569 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.63□□□□□ -1.19
UPF2-204ENST00000460569 SSX7Q7RTT5 188 aa7.63□□□□□ -1.19
UPF2-204ENST00000460569 PHYHIPLQ96FC7 376 aa7.63□□□□□ -1.19
UPF2-204ENST00000460569 PRR25Q96S07 402 aa7.63□□□□□ -1.19
UPF2-204ENST00000460569 OR51M1Q9H341 326 aa7.63□□□□□ -1.19
UPF2-204ENST00000460569 TMEM14CQ9P0S9 112 aa7.63□□□□□ -1.19
UPF2-204ENST00000460569 SMAD5-AS1Q9Y6J3 95 aa7.63□□□□□ -1.19
UPF2-204ENST00000460569 SORL1Q92673 2214 aa7.63□□□□□ -1.19
UPF2-204ENST00000460569 A0A087X0K7 114 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 TRAV2A0A0B4J234 112 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 MAP1LC3B2A6NCE7 125 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 K7EQG2 157 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 STAG3L2P0CL84 134 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 STAG3L3P0CL85 134 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 ARL14EPLP0DKL9 152 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 IGLC2P0DOY2 106 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 FHITP49789 147 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 SULT1A2P50226 295 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 RAB5CP51148 216 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 CD81P60033 236 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 BEAN1Q3B7T3 259 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 LCN15Q6UWW0 184 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 DPPA3Q6W0C5 159 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 PQLC2Q6ZP29 291 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 GTSCR1Q86UQ5 136 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 IQCF2Q8IXL9 164 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 LRRC20Q8TCA0 184 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 DCANP1Q8TF63 244 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 BLNKQ8WV28 456 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms