RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 AMN1Q8IY45 258 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 RNF166Q96A37 237 aaPredicted RBP4.08□□□□□ -1.76
PCDH9-203ENST00000456367 IMMP1LQ96LU5 166 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 TMEM14BQ9NUH8 114 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 MSRB2Q9Y3D2 182 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 KNL1Q8NG31 2342 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 MYLKQ15746 1914 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 HEATR5BQ9P2D3 2071 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 IGHV3-72A0A0B4J1Y9 119 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 TRAV40A0A0B4J280 105 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 PRR19A6NJB7 356 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 SRRM5B3KS81 715 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 K7EN84 100 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 EFNA2O43921 213 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 IGHV3-48P01763 117 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 CRYGCP07315 174 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 ECSCRQ19T08 205 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 SMRP1Q8NCR6 262 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 ASCC3Q8N3C0 2202 aaKnown RBP4.08□□□□□ -1.76
PCDH9-203ENST00000456367 TANC1Q9C0D5 1861 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 A0A1W2PR77 199 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 LINC00473A8K010 186 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 CEACAM4O75871 244 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 HLA-DRB4P13762 266 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 ZFP36L1Q07352 338 aaKnown RBP4.08□□□□□ -1.76
PCDH9-203ENST00000456367 FOXI1Q12951 378 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 FAM106AQ4KMX7 169 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 Q6ZVH6 145 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 HLA-DRB4X5D2U9 266 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 PTPRDP23468 1912 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 LTBP1Q14766 1721 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 CCL4P13236 92 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 SLC25A16P16260 332 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 MRPL23Q16540 153 aaKnown RBP4.07□□□□□ -1.76
PCDH9-203ENST00000456367 C15orf53Q8NAA6 179 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 FAM57AQ8TBR7 257 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 SSC4DQ8WTU2 575 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 C11orf1Q9H5F2 150 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 LINC01565O15544 149 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 NCR2O95944 276 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 CTRLP40313 264 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 DPM3Q9P2X0 92 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 NPIPB5A8MRT5 1133 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 NDUFS7O75251 213 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 CELA2AP08217 269 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 SNRPD3P62318 126 aaKnown RBP4.07□□□□□ -1.76
PCDH9-203ENST00000456367 CCL8P80075 99 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 RSPO4Q2I0M5 234 aaPredicted RBP4.07□□□□□ -1.76
PCDH9-203ENST00000456367 C5orf24Q7Z6I8 188 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 DCTN5Q9BTE1 182 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 A0A087WX48 190 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 NDUFB8O95169 186 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 DEFB109BQ30KR1 87 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 ANKRD29Q8N6D5 301 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 GLMPQ8WWB7 406 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 DDB2Q92466 427 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 MCRIP2Q9BUT9 160 aaKnown RBP4.07□□□□□ -1.76
PCDH9-203ENST00000456367 ZNF576Q9H609 170 aa4.07□□□□□ -1.76
PCDH9-203ENST00000456367 PSPNO60542 156 aa4.06□□□□□ -1.76
PCDH9-203ENST00000456367 CECR9P0C854 216 aa4.06□□□□□ -1.76
PCDH9-203ENST00000456367 LPAL2Q16609 132 aa4.06□□□□□ -1.76
PCDH9-203ENST00000456367 MRPL51Q4U2R6 128 aaKnown RBP4.06□□□□□ -1.76
PCDH9-203ENST00000456367 SHANK2-AS3Q9BTD1 123 aa4.06□□□□□ -1.76
PCDH9-203ENST00000456367 SELENOKQ9Y6D0 94 aa4.06□□□□□ -1.76
PCDH9-203ENST00000456367 XIRP1Q702N8 1843 aaKnown RBP4.06□□□□□ -1.76
PCDH9-203ENST00000456367 CGB1A6NKQ9 187 aa4.06□□□□□ -1.76
PCDH9-203ENST00000456367 PMS2P5A8MQ11 134 aa4.06□□□□□ -1.76
PCDH9-203ENST00000456367 C5orf47Q569G3 176 aa4.06□□□□□ -1.76
PCDH9-203ENST00000456367 GFRALQ6UXV0 394 aa4.06□□□□□ -1.76
PCDH9-203ENST00000456367 TRBV25-1A0A075B6N4 114 aa4.06□□□□□ -1.76
PCDH9-203ENST00000456367 LTAP01374 205 aa4.06□□□□□ -1.76
PCDH9-203ENST00000456367 FAM74A4Q5TZK3 123 aa4.06□□□□□ -1.76
PCDH9-203ENST00000456367 EXOC3-AS1Q8N2X6 119 aa4.06□□□□□ -1.76
PCDH9-203ENST00000456367 LINC00479Q96M42 142 aa4.06□□□□□ -1.76
PCDH9-203ENST00000456367 LSM4Q9Y4Z0 139 aaKnown RBP4.06□□□□□ -1.76
PCDH9-203ENST00000456367 COL4A5P29400 1685 aa4.06□□□□□ -1.76
PCDH9-203ENST00000456367 ATOX1O00244 68 aa4.06□□□□□ -1.76
PCDH9-203ENST00000456367 NBR2O15453 112 aa4.06□□□□□ -1.76
PCDH9-203ENST00000456367 PMS2CLQ68D20 193 aa4.06□□□□□ -1.76
PCDH9-203ENST00000456367 THAP8Q8NA92 274 aa4.06□□□□□ -1.76
PCDH9-203ENST00000456367 LINC00477Q96M19 166 aa4.06□□□□□ -1.76
PCDH9-203ENST00000456367 TRAV3A0A0B4J244 114 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 C5orf63A6NC05 138 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 K7EM74 188 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 FGF6P10767 208 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 SRD5A1P18405 259 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 CFHR2P36980 270 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 MNX1P50219 401 aaPredicted RBP4.05□□□□□ -1.76
PCDH9-203ENST00000456367 HERV-K104P63124 156 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 FGFBP3Q8TAT2 258 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 RASL10AQ92737 203 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 C20orf78Q9BR46 151 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 A0A1W2PPI3 338 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 CD28P10747 220 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 C20orf204Q6ZNR8 217 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 SLC25A45Q8N413 288 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 PRADC1Q9BSG0 188 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 TMEM133Q9H2Q1 129 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 TRPM7Q96QT4 1865 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 DOCK11Q5JSL3 2073 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms