RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 SCRG1O75711 98 aa3.92□□□□□ -1.78
EPHA3-202ENST00000452448 APCSP02743 223 aa3.92□□□□□ -1.78
EPHA3-202ENST00000452448 CFPP27918 469 aa3.92□□□□□ -1.78
EPHA3-202ENST00000452448 AQP1P29972 269 aa3.92□□□□□ -1.78
EPHA3-202ENST00000452448 SPINT3P49223 89 aa3.92□□□□□ -1.78
EPHA3-202ENST00000452448 ARL16Q0P5N6 197 aa3.92□□□□□ -1.78
EPHA3-202ENST00000452448 KCTD18Q6PI47 426 aaPredicted RBP3.92□□□□□ -1.78
EPHA3-202ENST00000452448 ZNF793Q6ZN11 406 aa3.92□□□□□ -1.78
EPHA3-202ENST00000452448 RFLNBQ8N5W9 214 aa3.92□□□□□ -1.78
EPHA3-202ENST00000452448 C2orf50Q96LR7 162 aa3.92□□□□□ -1.78
EPHA3-202ENST00000452448 TRGV11A0A075B6L2 103 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 F6UB75 175 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 H3BT86 120 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 HMGA1P17096 107 aaKnown RBP3.91□□□□□ -1.78
EPHA3-202ENST00000452448 ECSCRQ19T08 205 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 PAPPA-AS1Q5QFB9 102 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 DGAT2L6Q6ZPD8 337 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 POM121L12Q8N7R1 296 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 NEXN-AS1Q8NBZ9 246 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 PRSS33Q8NF86 280 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 NUP35Q8NFH5 326 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 ODF3Q96PU9 254 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 C11orf68Q9H3H3 251 aaKnown RBP3.91□□□□□ -1.78
EPHA3-202ENST00000452448 DPH3P1Q9H4G8 78 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 LINC00527Q9UJ94 153 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 TRAV9-1A0A075B6T8 112 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 SMIM26A0A096LP01 95 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 EPM2AB3EWF7 344 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 FOXS1O43638 330 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 WISP2O76076 250 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 IGLV1-40P01703 118 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 SFTPDP35247 375 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 NPC2P61916 151 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 SSBP1Q04837 148 aaKnown RBP3.91□□□□□ -1.78
EPHA3-202ENST00000452448 PAX8Q06710 450 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 LINC00305Q7Z4B0 112 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 SFTPA2Q8IWL1 248 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 SFTPA1Q8IWL2 248 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 FGFBP3Q8TAT2 258 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 IL1F10Q8WWZ1 152 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 HIGD1BQ9P298 99 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 KLK13Q9UKR3 277 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 GREB1Q4ZG55 1949 aa3.91□□□□□ -1.78
EPHA3-202ENST00000452448 CEBPZOSA8MTT3 80 aa3.9□□□□□ -1.78
EPHA3-202ENST00000452448 SNURFLB1AK76 121 aa3.9□□□□□ -1.78
EPHA3-202ENST00000452448 SYNGR2O43760 224 aa3.9□□□□□ -1.78
EPHA3-202ENST00000452448 GYPBP06028 91 aa3.9□□□□□ -1.78
EPHA3-202ENST00000452448 HLA-DMBP28068 263 aa3.9□□□□□ -1.78
EPHA3-202ENST00000452448 FAM78AQ5JUQ0 283 aa3.9□□□□□ -1.78
EPHA3-202ENST00000452448 UNQ9165/PRO28630Q6UXU0 137 aa3.9□□□□□ -1.78
EPHA3-202ENST00000452448 TMEM99Q8N816 258 aa3.9□□□□□ -1.78
EPHA3-202ENST00000452448 OR52N5Q8NH56 324 aa3.9□□□□□ -1.78
EPHA3-202ENST00000452448 FGF13Q92913 245 aa3.9□□□□□ -1.78
EPHA3-202ENST00000452448 CYSTM1Q9H1C7 97 aa3.9□□□□□ -1.78
EPHA3-202ENST00000452448 SERP1Q9Y6X1 66 aa3.9□□□□□ -1.78
EPHA3-202ENST00000452448 TRAV8-4A0A0B4J246 113 aa3.9□□□□□ -1.79
EPHA3-202ENST00000452448 TEX50A0A1B0GTY4 177 aa3.9□□□□□ -1.79
EPHA3-202ENST00000452448 IZUMO1RA6ND01 250 aa3.9□□□□□ -1.79
EPHA3-202ENST00000452448 SRSF10O75494 262 aaKnown RBP3.9□□□□□ -1.79
EPHA3-202ENST00000452448 CD59P13987 128 aa3.9□□□□□ -1.79
EPHA3-202ENST00000452448 FXYD2P54710 66 aa3.9□□□□□ -1.79
EPHA3-202ENST00000452448 SNRPD3P62318 126 aaKnown RBP3.9□□□□□ -1.79
EPHA3-202ENST00000452448 HBG2P69892 147 aa3.9□□□□□ -1.79
EPHA3-202ENST00000452448 DPTQ07507 201 aa3.9□□□□□ -1.79
EPHA3-202ENST00000452448 BEAN1Q3B7T3 259 aa3.9□□□□□ -1.79
EPHA3-202ENST00000452448 LGALS9BQ3B8N2 356 aa3.9□□□□□ -1.79
EPHA3-202ENST00000452448 DCANP1Q8TF63 244 aa3.9□□□□□ -1.79
EPHA3-202ENST00000452448 NMNAT3Q96T66 252 aa3.9□□□□□ -1.79
EPHA3-202ENST00000452448 IMUPQ9GZP8 106 aa3.9□□□□□ -1.79
EPHA3-202ENST00000452448 NHP2Q9NX24 153 aaKnown RBP3.9□□□□□ -1.79
EPHA3-202ENST00000452448 ANAPC10Q9UM13 185 aa3.9□□□□□ -1.79
EPHA3-202ENST00000452448 TMEM131Q92545 1883 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 INS-IGF2F8WCM5 200 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 INAFM2P0DMQ5 153 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 LIM2P55344 173 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 MLANAQ16655 118 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 CEMP1Q6PRD7 247 aaPredicted RBP3.89□□□□□ -1.79
EPHA3-202ENST00000452448 COX8CQ7Z4L0 72 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 DRAM1Q8N682 238 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 LINC01555Q8NAE3 123 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 SMRP1Q8NCR6 262 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 NT5CQ8TCD5 201 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 WFDC5Q8TCV5 224 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 FXYD5Q96DB9 178 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 KXD1Q9BQD3 176 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 LAMTOR3Q9UHA4 124 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 RALGAPA1Q6GYQ0 2036 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 SCN2AQ99250 2005 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 FFAR1O14842 300 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 PDCD6O75340 191 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 ZNF883P0CG24 379 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 MYCNOSP40205 109 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 HERVK_113P61574 105 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 SS18Q15532 418 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 ORMDL2Q53FV1 153 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 CENPWQ5EE01 88 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 WDR86Q86TI4 376 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 ZNF584Q8IVC4 421 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 OR10AC1Q8NH08 325 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 NXT2Q9NPJ8 142 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms