RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 IGHV7-4-1A0A0J9YVY3 117 aa14.67□□□□□ -0.06
RPS28-202ENST00000449223 A0A1W2PS18 150 aa14.67□□□□□ -0.06
RPS28-202ENST00000449223 MYCNOSP40205 109 aa14.67□□□□□ -0.06
RPS28-202ENST00000449223 CCL20P78556 96 aa14.67□□□□□ -0.06
RPS28-202ENST00000449223 MARC2Q969Z3 335 aa14.67□□□□□ -0.06
RPS28-202ENST00000449223 NARS2Q96I59 477 aaKnown RBP14.67□□□□□ -0.06
RPS28-202ENST00000449223 OR51M1Q9H341 326 aa14.67□□□□□ -0.06
RPS28-202ENST00000449223 OR7C2O60412 319 aa14.66□□□□□ -0.06
RPS28-202ENST00000449223 APOHP02749 345 aaPredicted RBP14.66□□□□□ -0.06
RPS28-202ENST00000449223 RPL7P18124 248 aaKnown RBP14.66□□□□□ -0.06
RPS28-202ENST00000449223 GCHFRP30047 84 aa14.66□□□□□ -0.06
RPS28-202ENST00000449223 TM4SF20Q53R12 229 aa14.66□□□□□ -0.06
RPS28-202ENST00000449223 DLX4Q92988 240 aaPredicted RBP14.66□□□□□ -0.06
RPS28-202ENST00000449223 DUX3Q96PT4 197 aa14.66□□□□□ -0.06
RPS28-202ENST00000449223 PAXXQ9BUH6 204 aa14.66□□□□□ -0.06
RPS28-202ENST00000449223 ZNF747Q9BV97 191 aa14.66□□□□□ -0.06
RPS28-202ENST00000449223 SMPXQ9UHP9 88 aa14.66□□□□□ -0.06
RPS28-202ENST00000449223 ARL2-SNX15V9GYD0 113 aa14.66□□□□□ -0.06
RPS28-202ENST00000449223 ZNF207O43670 478 aaKnown RBP14.66□□□□□ -0.06
RPS28-202ENST00000449223 PPT1P50897 306 aa14.66□□□□□ -0.06
RPS28-202ENST00000449223 NSUN5P1Q3KNT7 163 aa14.66□□□□□ -0.06
RPS28-202ENST00000449223 C16orf54Q6UWD8 224 aa14.66□□□□□ -0.06
RPS28-202ENST00000449223 OR9G4Q8NGQ1 327 aa14.66□□□□□ -0.06
RPS28-202ENST00000449223 GLMPQ8WWB7 406 aa14.66□□□□□ -0.06
RPS28-202ENST00000449223 FXYD5Q96DB9 178 aa14.66□□□□□ -0.06
RPS28-202ENST00000449223 TMEM167BQ9NRX6 74 aa14.66□□□□□ -0.06
RPS28-202ENST00000449223 PEMTQ9UBM1 199 aa14.66□□□□□ -0.06
RPS28-202ENST00000449223 IGLC2P0DOY2 106 aa14.65□□□□□ -0.06
RPS28-202ENST00000449223 BMI1P35226 326 aa14.65□□□□□ -0.06
RPS28-202ENST00000449223 OR8I2Q8N0Y5 310 aa14.65□□□□□ -0.06
RPS28-202ENST00000449223 TMPRSS5Q9H3S3 457 aa14.65□□□□□ -0.06
RPS28-202ENST00000449223 TMEM231Q9H6L2 316 aa14.65□□□□□ -0.06
RPS28-202ENST00000449223 C2orf70A6NJV1 201 aa14.64□□□□□ -0.07
RPS28-202ENST00000449223 PYYP10082 97 aa14.64□□□□□ -0.07
RPS28-202ENST00000449223 UBE2L3P68036 154 aaKnown RBP14.64□□□□□ -0.07
RPS28-202ENST00000449223 GRAMD2BQ96HH9 432 aa14.64□□□□□ -0.07
RPS28-202ENST00000449223 FAM210AQ96ND0 272 aa14.64□□□□□ -0.07
RPS28-202ENST00000449223 RHPN1-AS1Q9BWJ2 59 aa14.64□□□□□ -0.07
RPS28-202ENST00000449223 MANBALQ9NQG1 85 aa14.64□□□□□ -0.07
RPS28-202ENST00000449223 COL6A5A8TX70 2615 aa14.63□□□□□ -0.07
RPS28-202ENST00000449223 A0A1B0GV50 99 aa14.63□□□□□ -0.07
RPS28-202ENST00000449223 RAB19A4D1S5 217 aa14.63□□□□□ -0.07
RPS28-202ENST00000449223 CHEK1O14757 476 aa14.63□□□□□ -0.07
RPS28-202ENST00000449223 HIST1H1EP10412 219 aaKnown RBP14.63□□□□□ -0.07
RPS28-202ENST00000449223 CBLN1P23435 193 aa14.63□□□□□ -0.07
RPS28-202ENST00000449223 TAGLN2P37802 199 aaKnown RBP14.63□□□□□ -0.07
RPS28-202ENST00000449223 NDUFA5Q16718 116 aa14.63□□□□□ -0.07
RPS28-202ENST00000449223 ELOVL1Q9BW60 279 aa14.63□□□□□ -0.07
RPS28-202ENST00000449223 SIGLEC8Q9NYZ4 499 aa14.63□□□□□ -0.07
RPS28-202ENST00000449223 A0A087X0K7 114 aa14.62□□□□□ -0.07
RPS28-202ENST00000449223 EIF4E3Q8N5X7 224 aaKnown RBP14.62□□□□□ -0.07
RPS28-202ENST00000449223 OR4F17Q8NGA8 305 aa14.62□□□□□ -0.07
RPS28-202ENST00000449223 OR4F4Q96R69 305 aa14.62□□□□□ -0.07
RPS28-202ENST00000449223 IFNA1P01562 189 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 OR10J4P0C629 311 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 NBEAP1P0C6P0 100 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 BCL2P10415 239 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 GALR1P47211 349 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 MEOX2P50222 304 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 PDE6HQ13956 83 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 GUK1Q16774 197 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 ADAMTSL5Q6ZMM2 481 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 LURAP1LQ8IV03 231 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 SMAD5-AS1Q9Y6J3 95 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 WNK1Q9H4A3 2382 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 IGHV3-49A0A0A0MS15 119 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 A0A1W2PRE2 83 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 H3BQ15 152 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 ZNF253O75346 499 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 NDUFS6O75380 124 aaKnown RBP14.61□□□□□ -0.07
RPS28-202ENST00000449223 CD5P06127 495 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 CSN3P07498 182 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 FOLR2P14207 255 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 EDN2P20800 178 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 SIGLEC15Q6ZMC9 328 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 C17orf77Q96MU5 243 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 ZNF586Q9NXT0 402 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 GNG13Q9P2W3 67 aa14.61□□□□□ -0.07
RPS28-202ENST00000449223 STAB1Q9NY15 2570 aa14.6□□□□□ -0.07
RPS28-202ENST00000449223 TRBV19A0A075B6N1 114 aa14.6□□□□□ -0.07
RPS28-202ENST00000449223 IGHV3OR16-13A0A075B7E8 117 aa14.6□□□□□ -0.07
RPS28-202ENST00000449223 IGHV3-74A0A0B4J1X5 117 aa14.6□□□□□ -0.07
RPS28-202ENST00000449223 IGHV3-66A0A0C4DH42 116 aa14.6□□□□□ -0.07
RPS28-202ENST00000449223 HELTA6NFD8 242 aa14.6□□□□□ -0.07
RPS28-202ENST00000449223 RBFOX3A6NFN3 312 aa14.6□□□□□ -0.07
RPS28-202ENST00000449223 OVOL1O14753 267 aa14.6□□□□□ -0.07
RPS28-202ENST00000449223 ZNF506Q5JVG8 444 aa14.6□□□□□ -0.07
RPS28-202ENST00000449223 IQCF2Q8IXL9 164 aa14.6□□□□□ -0.07
RPS28-202ENST00000449223 TXNDC17Q9BRA2 123 aa14.6□□□□□ -0.07
RPS28-202ENST00000449223 SMDT1Q9H4I9 107 aa14.6□□□□□ -0.07
RPS28-202ENST00000449223 LOC102723971A0A1B0GUV8 181 aa14.59□□□□□ -0.07
RPS28-202ENST00000449223 FAM74A7A6NL05 159 aa14.59□□□□□ -0.07
RPS28-202ENST00000449223 FAM90A2PQ658T7 463 aa14.59□□□□□ -0.07
RPS28-202ENST00000449223 SHISA2Q6UWI4 295 aa14.59□□□□□ -0.07
RPS28-202ENST00000449223 COMMD7Q86VX2 200 aa14.59□□□□□ -0.07
RPS28-202ENST00000449223 LINC00482Q8N8I6 264 aa14.59□□□□□ -0.07
RPS28-202ENST00000449223 NKX6-2Q9C056 277 aaPredicted RBP14.59□□□□□ -0.07
RPS28-202ENST00000449223 LYPD1Q8N2G4 141 aa14.58□□□□□ -0.08
RPS28-202ENST00000449223 VAX2Q9UIW0 290 aa14.58□□□□□ -0.08
RPS28-202ENST00000449223 VWFP04275 2813 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms