RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 THYN1Q9P016 225 aa16.23■□□□□ 0.19
SHOX2-203ENST00000441443 SSUH2Q9Y2M2 353 aa16.23■□□□□ 0.19
SHOX2-203ENST00000441443 LOC389332A0A1B0GUA5 103 aa16.22■□□□□ 0.19
SHOX2-203ENST00000441443 K7EP34 96 aa16.22■□□□□ 0.19
SHOX2-203ENST00000441443 LHBP01229 141 aa16.22■□□□□ 0.19
SHOX2-203ENST00000441443 NHLH1Q02575 133 aa16.22■□□□□ 0.19
SHOX2-203ENST00000441443 PIP4P2Q8N4L2 257 aa16.22■□□□□ 0.19
SHOX2-203ENST00000441443 A6NDN8 102 aa16.22■□□□□ 0.19
SHOX2-203ENST00000441443 CFHR2P36980 270 aa16.22■□□□□ 0.19
SHOX2-203ENST00000441443 HCP5Q6MZN7 132 aa16.22■□□□□ 0.19
SHOX2-203ENST00000441443 NCOR1P1Q9H4R4 102 aa16.22■□□□□ 0.19
SHOX2-203ENST00000441443 RPUSD1Q9UJJ7 312 aaKnown RBP16.22■□□□□ 0.19
SHOX2-203ENST00000441443 K7EM74 188 aa16.21■□□□□ 0.19
SHOX2-203ENST00000441443 PRSS57Q6UWY2 283 aa16.21■□□□□ 0.19
SHOX2-203ENST00000441443 STXBP6Q8NFX7 210 aa16.21■□□□□ 0.19
SHOX2-203ENST00000441443 SH3BGRL2Q9UJC5 107 aa16.21■□□□□ 0.19
SHOX2-203ENST00000441443 CSN1S1P47710 185 aa16.21■□□□□ 0.19
SHOX2-203ENST00000441443 THAP8Q8NA92 274 aa16.21■□□□□ 0.19
SHOX2-203ENST00000441443 OSR1Q8TAX0 266 aaPredicted RBP16.21■□□□□ 0.19
SHOX2-203ENST00000441443 SRSF12Q8WXF0 261 aaKnown RBP16.21■□□□□ 0.19
SHOX2-203ENST00000441443 ZNF71Q9NQZ8 489 aaPredicted RBP16.21■□□□□ 0.19
SHOX2-203ENST00000441443 IFI27P40305 119 aaPredicted RBP16.21■□□□□ 0.18
SHOX2-203ENST00000441443 DIAPH2-AS1Q14236 149 aa16.21■□□□□ 0.18
SHOX2-203ENST00000441443 IGLV1-44P01699 117 aa16.2■□□□□ 0.18
SHOX2-203ENST00000441443 GOLT1AQ6ZVE7 132 aa16.2■□□□□ 0.18
SHOX2-203ENST00000441443 SEM1Q6ZVN7 128 aa16.2■□□□□ 0.18
SHOX2-203ENST00000441443 EXOC3-AS1Q8N2X6 119 aa16.2■□□□□ 0.18
SHOX2-203ENST00000441443 A0A1B0GUT8 65 aa16.2■□□□□ 0.18
SHOX2-203ENST00000441443 Q86TA4 180 aa16.2■□□□□ 0.18
SHOX2-203ENST00000441443 NPIPB6E9PJ23 425 aa16.19■□□□□ 0.18
SHOX2-203ENST00000441443 OVOL3O00110 214 aa16.19■□□□□ 0.18
SHOX2-203ENST00000441443 GP9P14770 177 aa16.19■□□□□ 0.18
SHOX2-203ENST00000441443 TM4SF20Q53R12 229 aa16.19■□□□□ 0.18
SHOX2-203ENST00000441443 OR4A5Q8NH83 315 aa16.19■□□□□ 0.18
SHOX2-203ENST00000441443 KALRNO60229 2985 aa16.19■□□□□ 0.18
SHOX2-203ENST00000441443 ZCCHC24Q8N2G6 241 aaKnown RBP16.19■□□□□ 0.18
SHOX2-203ENST00000441443 OR5AN1Q8NGI8 311 aa16.19■□□□□ 0.18
SHOX2-203ENST00000441443 GAFA1Q96PS6 74 aa16.19■□□□□ 0.18
SHOX2-203ENST00000441443 PLSCR4Q9NRQ2 329 aa16.19■□□□□ 0.18
SHOX2-203ENST00000441443 TPSG1Q9NRR2 321 aa16.19■□□□□ 0.18
SHOX2-203ENST00000441443 SUB1P53999 127 aaKnown RBP eCLIP16.19■□□□□ 0.18
SHOX2-203ENST00000441443 SPOCK3Q9BQ16 436 aa16.19■□□□□ 0.18
SHOX2-203ENST00000441443 ABCA4P78363 2273 aa16.18■□□□□ 0.18
SHOX2-203ENST00000441443 A0A096LNJ9 63 aa16.18■□□□□ 0.18
SHOX2-203ENST00000441443 NEGR1Q7Z3B1 354 aa16.18■□□□□ 0.18
SHOX2-203ENST00000441443 SPCS1Q9Y6A9 102 aa16.18■□□□□ 0.18
SHOX2-203ENST00000441443 CIDEAO60543 219 aa16.18■□□□□ 0.18
SHOX2-203ENST00000441443 CACNG7P62955 275 aa16.18■□□□□ 0.18
SHOX2-203ENST00000441443 C1orf185Q5T7R7 199 aa16.18■□□□□ 0.18
SHOX2-203ENST00000441443 JKAMPQ9P055 326 aa16.18■□□□□ 0.18
SHOX2-203ENST00000441443 A1L4Q6 167 aa16.17■□□□□ 0.18
SHOX2-203ENST00000441443 IGFL2Q6UWQ7 119 aa16.17■□□□□ 0.18
SHOX2-203ENST00000441443 CHTOPQ9Y3Y2 248 aaKnown RBP16.17■□□□□ 0.18
SHOX2-203ENST00000441443 F11RQ9Y624 299 aaKnown RBP16.17■□□□□ 0.18
SHOX2-203ENST00000441443 A0A1W2PPI3 338 aa16.17■□□□□ 0.18
SHOX2-203ENST00000441443 ZNF833PQ6ZTB9 187 aa16.17■□□□□ 0.18
SHOX2-203ENST00000441443 BOD1L2Q8IYS8 172 aa16.17■□□□□ 0.18
SHOX2-203ENST00000441443 TMEM186Q96B77 213 aa16.17■□□□□ 0.18
SHOX2-203ENST00000441443 IGF2RP11717 2491 aa16.17■□□□□ 0.18
SHOX2-203ENST00000441443 ZNF785A8K8V0 405 aa16.16■□□□□ 0.18
SHOX2-203ENST00000441443 CCL3L1P16619 93 aa16.16■□□□□ 0.18
SHOX2-203ENST00000441443 PCP2Q8IVA1 136 aa16.16■□□□□ 0.18
SHOX2-203ENST00000441443 VSTM2AQ8TAG5 236 aa16.16■□□□□ 0.18
SHOX2-203ENST00000441443 NMUP48645 174 aa16.16■□□□□ 0.18
SHOX2-203ENST00000441443 ZNF474Q6S9Z5 364 aaPredicted RBP16.16■□□□□ 0.18
SHOX2-203ENST00000441443 RAI1Q7Z5J4 1906 aaPredicted RBP16.16■□□□□ 0.18
SHOX2-203ENST00000441443 SERTM2A0A1B0GWG4 89 aa16.16■□□□□ 0.18
SHOX2-203ENST00000441443 SMAD7O15105 426 aaKnown RBP16.16■□□□□ 0.18
SHOX2-203ENST00000441443 SLC25A17O43808 307 aa16.16■□□□□ 0.18
SHOX2-203ENST00000441443 GNG7O60262 68 aa16.16■□□□□ 0.18
SHOX2-203ENST00000441443 IGLV2-11P01706 119 aa16.16■□□□□ 0.18
SHOX2-203ENST00000441443 MEF2CQ06413 473 aaPredicted RBP16.16■□□□□ 0.18
SHOX2-203ENST00000441443 TMEM167AQ8TBQ9 72 aa16.16■□□□□ 0.18
SHOX2-203ENST00000441443 NPFFR1Q9GZQ6 430 aa16.16■□□□□ 0.18
SHOX2-203ENST00000441443 RNF7Q9UBF6 113 aa16.16■□□□□ 0.18
SHOX2-203ENST00000441443 PLP1P60201 277 aa16.15■□□□□ 0.18
SHOX2-203ENST00000441443 HSD52Q0P140 79 aa16.15■□□□□ 0.18
SHOX2-203ENST00000441443 C1orf162Q8NEQ5 155 aaPredicted RBP16.15■□□□□ 0.18
SHOX2-203ENST00000441443 A0A1W2PPM0 123 aa16.15■□□□□ 0.18
SHOX2-203ENST00000441443 RPL24P83731 157 aaKnown RBP16.15■□□□□ 0.18
SHOX2-203ENST00000441443 FAM27E3Q08E93 113 aa16.15■□□□□ 0.18
SHOX2-203ENST00000441443 RIGQ13278 110 aa16.15■□□□□ 0.18
SHOX2-203ENST00000441443 RITA1Q96K30 269 aa16.15■□□□□ 0.18
SHOX2-203ENST00000441443 SLC25A15Q9Y619 301 aa16.15■□□□□ 0.18
SHOX2-203ENST00000441443 TM4SF5O14894 197 aa16.14■□□□□ 0.17
SHOX2-203ENST00000441443 ADAMTSL5Q6ZMM2 481 aa16.14■□□□□ 0.17
SHOX2-203ENST00000441443 INSIG2Q9Y5U4 225 aa16.14■□□□□ 0.17
SHOX2-203ENST00000441443 LGALS7P47929 136 aa16.14■□□□□ 0.17
SHOX2-203ENST00000441443 WFDC3Q8IUB2 231 aa16.14■□□□□ 0.17
SHOX2-203ENST00000441443 OR4C13Q8NGP0 309 aa16.14■□□□□ 0.17
SHOX2-203ENST00000441443 ATRXP46100 2492 aa16.13■□□□□ 0.17
SHOX2-203ENST00000441443 D6R8Y8 96 aa16.13■□□□□ 0.17
SHOX2-203ENST00000441443 INS-IGF2F8WCM5 200 aa16.13■□□□□ 0.17
SHOX2-203ENST00000441443 C22orf34Q6ZV56 151 aa16.13■□□□□ 0.17
SHOX2-203ENST00000441443 SIGLEC8Q9NYZ4 499 aa16.13■□□□□ 0.17
SHOX2-203ENST00000441443 FAM222BQ8WU58 562 aa16.13■□□□□ 0.17
SHOX2-203ENST00000441443 FAM215AQ9Y5M1 114 aa16.13■□□□□ 0.17
SHOX2-203ENST00000441443 LYZP61626 148 aa16.13■□□□□ 0.17
SHOX2-203ENST00000441443 RBPJQ06330 500 aa16.13■□□□□ 0.17
SHOX2-203ENST00000441443 APOBEC3AP31941 199 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms