RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 MED12LQ86YW9 2145 aa9.56□□□□□ -0.88
PTCH1-209ENST00000437951 SMIM10L1P0DMW3 83 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 TCF15Q12870 199 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 SPSB3Q6PJ21 355 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 PRIMA1Q86XR5 153 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 SMIM10Q96HG1 83 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 SRXN1Q9BYN0 137 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 CSTL1Q9H114 145 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 COL24A1Q17RW2 1714 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 LCN12Q6JVE5 192 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 ZNRF1Q8ND25 227 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 FAM168AQ92567 244 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 DEPPQ9NTK1 212 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 TCRAP04437 139 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 LGALS9BQ3B8N2 356 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 LGALS9CQ6DKI2 356 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 C1QL2Q7Z5L3 287 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 SHISA3A0PJX4 238 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 NPSP0C0P6 89 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 CRYBA2P53672 197 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 SRSF2Q01130 221 aaKnown RBP9.55□□□□□ -0.88
PTCH1-209ENST00000437951 TMEM75Q8N9X5 138 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 RNF5Q99942 180 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 ZNF492Q9P255 531 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 KNCNA6PVL3 124 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 SYNJ2BPP57105 145 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 IL17RELQ6ZVW7 336 aa9.55□□□□□ -0.88
PTCH1-209ENST00000437951 IGLC2P0DOY2 106 aa9.54□□□□□ -0.88
PTCH1-209ENST00000437951 IGLC3P0DOY3 106 aa9.54□□□□□ -0.88
PTCH1-209ENST00000437951 EGR2P11161 476 aaPredicted RBP9.54□□□□□ -0.88
PTCH1-209ENST00000437951 TRPT1Q86TN4 253 aaKnown RBP9.54□□□□□ -0.88
PTCH1-209ENST00000437951 IGHV3-23P01764 117 aa9.54□□□□□ -0.88
PTCH1-209ENST00000437951 SRSF8Q9BRL6 282 aaKnown RBP9.54□□□□□ -0.88
PTCH1-209ENST00000437951 LSM4Q9Y4Z0 139 aaKnown RBP9.54□□□□□ -0.88
PTCH1-209ENST00000437951 PSCAO43653 123 aa9.54□□□□□ -0.88
PTCH1-209ENST00000437951 C9orf139Q6ZV77 190 aa9.54□□□□□ -0.88
PTCH1-209ENST00000437951 PLA2G2FQ9BZM2 168 aa9.54□□□□□ -0.88
PTCH1-209ENST00000437951 ATP5G1P05496 136 aa9.54□□□□□ -0.88
PTCH1-209ENST00000437951 TRAV41A0A0B4J266 112 aa9.54□□□□□ -0.88
PTCH1-209ENST00000437951 NPIPB5A8MRT5 1133 aa9.54□□□□□ -0.88
PTCH1-209ENST00000437951 IGFBP6P24592 240 aaPredicted RBP9.54□□□□□ -0.88
PTCH1-209ENST00000437951 CFPP27918 469 aa9.54□□□□□ -0.88
PTCH1-209ENST00000437951 LINC00114Q6XXX2 140 aa9.54□□□□□ -0.88
PTCH1-209ENST00000437951 TRBV7-1A0A0A6YYK4 115 aa9.53□□□□□ -0.88
PTCH1-209ENST00000437951 SH2D1AO60880 128 aa9.53□□□□□ -0.88
PTCH1-209ENST00000437951 FOXG1P55316 489 aaPredicted RBP9.53□□□□□ -0.88
PTCH1-209ENST00000437951 PAX8Q06710 450 aa9.53□□□□□ -0.88
PTCH1-209ENST00000437951 ZNF876PQ49A33 203 aa9.53□□□□□ -0.88
PTCH1-209ENST00000437951 RCHY1Q96PM5 261 aa9.53□□□□□ -0.88
PTCH1-209ENST00000437951 GATA2P23769 480 aaPredicted RBP9.53□□□□□ -0.88
PTCH1-209ENST00000437951 DMRTC2Q8IXT2 367 aaPredicted RBP9.53□□□□□ -0.88
PTCH1-209ENST00000437951 C2orf16Q68DN1 1984 aa9.53□□□□□ -0.88
PTCH1-209ENST00000437951 J3QRE1 110 aa9.53□□□□□ -0.88
PTCH1-209ENST00000437951 ZNF319Q9P2F9 582 aa9.53□□□□□ -0.88
PTCH1-209ENST00000437951 CD55P08174 381 aa9.53□□□□□ -0.88
PTCH1-209ENST00000437951 FGF6P10767 208 aa9.53□□□□□ -0.88
PTCH1-209ENST00000437951 MRPL14Q6P1L8 145 aaKnown RBP9.53□□□□□ -0.88
PTCH1-209ENST00000437951 TMEM14EPQ6UXP3 125 aa9.53□□□□□ -0.88
PTCH1-209ENST00000437951 A0A087WX48 190 aa9.53□□□□□ -0.88
PTCH1-209ENST00000437951 MED13Q9UHV7 2174 aa9.53□□□□□ -0.88
PTCH1-209ENST00000437951 CCL4P13236 92 aa9.53□□□□□ -0.88
PTCH1-209ENST00000437951 PLXNB1O43157 2135 aa9.53□□□□□ -0.88
PTCH1-209ENST00000437951 LHFPL1Q86WI0 220 aa9.52□□□□□ -0.88
PTCH1-209ENST00000437951 MBNL3Q9NUK0 354 aaKnown RBP9.52□□□□□ -0.88
PTCH1-209ENST00000437951 SIGLEC12Q96PQ1 595 aa9.52□□□□□ -0.89
PTCH1-209ENST00000437951 SS18L2Q9UHA2 77 aa9.52□□□□□ -0.89
PTCH1-209ENST00000437951 SMRP1Q8NCR6 262 aa9.52□□□□□ -0.89
PTCH1-209ENST00000437951 TMEM133Q9H2Q1 129 aa9.52□□□□□ -0.89
PTCH1-209ENST00000437951 K7EMI3 77 aa9.52□□□□□ -0.89
PTCH1-209ENST00000437951 ETDBQ3ZM63 59 aa9.52□□□□□ -0.89
PTCH1-209ENST00000437951 Q8N8P6 123 aa9.52□□□□□ -0.89
PTCH1-209ENST00000437951 CACNA1HO95180 2353 aa9.52□□□□□ -0.89
PTCH1-209ENST00000437951 A0A0U1RRA0 63 aa9.52□□□□□ -0.89
PTCH1-209ENST00000437951 IGHV3OR16-13A0A075B7E8 117 aa9.51□□□□□ -0.89
PTCH1-209ENST00000437951 IGHV3-74A0A0B4J1X5 117 aa9.51□□□□□ -0.89
PTCH1-209ENST00000437951 LOC101059948A0A1B0GTJ6 334 aa9.51□□□□□ -0.89
PTCH1-209ENST00000437951 UBR3Q6ZT12 1888 aa9.51□□□□□ -0.89
PTCH1-209ENST00000437951 B5MCH6 92 aa9.51□□□□□ -0.89
PTCH1-209ENST00000437951 BVES-AS1Q5T3Y7 98 aa9.51□□□□□ -0.89
PTCH1-209ENST00000437951 ZNF625Q96I27 306 aaPredicted RBP9.51□□□□□ -0.89
PTCH1-209ENST00000437951 IGHV3-49A0A0A0MS15 119 aa9.51□□□□□ -0.89
PTCH1-209ENST00000437951 PRSS46E5RG02 174 aa9.51□□□□□ -0.89
PTCH1-209ENST00000437951 C10orf91Q5T1B1 145 aa9.51□□□□□ -0.89
PTCH1-209ENST00000437951 TNRC6AQ8NDV7 1962 aaKnown RBP9.51□□□□□ -0.89
PTCH1-209ENST00000437951 ITGBL1O95965 494 aaPredicted RBP9.51□□□□□ -0.89
PTCH1-209ENST00000437951 VDAC2P45880 294 aaPredicted RBP9.51□□□□□ -0.89
PTCH1-209ENST00000437951 SCRT1Q9BWW7 348 aa9.51□□□□□ -0.89
PTCH1-209ENST00000437951 IGHV3-35A0A0C4DH35 117 aa9.51□□□□□ -0.89
PTCH1-209ENST00000437951 COX6A1P12074 109 aa9.51□□□□□ -0.89
PTCH1-209ENST00000437951 STPG4Q8N801 248 aa9.51□□□□□ -0.89
PTCH1-209ENST00000437951 C15orf53Q8NAA6 179 aa9.51□□□□□ -0.89
PTCH1-209ENST00000437951 CARD19Q96LW7 228 aa9.51□□□□□ -0.89
PTCH1-209ENST00000437951 SPANXB1Q9NS25 103 aaPredicted RBP9.5□□□□□ -0.89
PTCH1-209ENST00000437951 USF3Q68DE3 2245 aa9.5□□□□□ -0.89
PTCH1-209ENST00000437951 TRAV40A0A0B4J280 105 aa9.5□□□□□ -0.89
PTCH1-209ENST00000437951 CSRP3P50461 194 aa9.5□□□□□ -0.89
PTCH1-209ENST00000437951 R3HDMLQ9H3Y0 253 aa9.5□□□□□ -0.89
PTCH1-209ENST00000437951 RFNGQ9Y644 331 aa9.5□□□□□ -0.89
PTCH1-209ENST00000437951 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.5□□□□□ -0.89
PTCH1-209ENST00000437951 CDKN1AP38936 164 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms