RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 STXBP6Q8NFX7 210 aa8.33□□□□□ -1.08
CLSTN1-203ENST00000435891 IGFBPL1Q8WX77 278 aa8.33□□□□□ -1.08
CLSTN1-203ENST00000435891 TRAV26-1A0A087WT03 109 aa8.33□□□□□ -1.08
CLSTN1-203ENST00000435891 CKS1BP61024 79 aa8.33□□□□□ -1.08
CLSTN1-203ENST00000435891 ARF6P62330 175 aa8.33□□□□□ -1.08
CLSTN1-203ENST00000435891 BVES-AS1Q5T3Y7 98 aa8.33□□□□□ -1.08
CLSTN1-203ENST00000435891 OR8B3Q8NGG8 313 aa8.33□□□□□ -1.08
CLSTN1-203ENST00000435891 BLNKQ8WV28 456 aa8.33□□□□□ -1.08
CLSTN1-203ENST00000435891 SIGMAR1Q99720 223 aa8.33□□□□□ -1.08
CLSTN1-203ENST00000435891 HILPDAQ9Y5L2 63 aa8.33□□□□□ -1.08
CLSTN1-203ENST00000435891 SMIM27A0A1W2PRY6 76 aa8.32□□□□□ -1.08
CLSTN1-203ENST00000435891 BMPR1BO00238 502 aa8.32□□□□□ -1.08
CLSTN1-203ENST00000435891 CAMPP49913 170 aa8.32□□□□□ -1.08
CLSTN1-203ENST00000435891 Q0VG73 95 aa8.32□□□□□ -1.08
CLSTN1-203ENST00000435891 THAP8Q8NA92 274 aa8.32□□□□□ -1.08
CLSTN1-203ENST00000435891 TSKUQ8WUA8 353 aa8.32□□□□□ -1.08
CLSTN1-203ENST00000435891 ZNF835Q9Y2P0 537 aa8.32□□□□□ -1.08
CLSTN1-203ENST00000435891 APCSP02743 223 aa8.32□□□□□ -1.08
CLSTN1-203ENST00000435891 TNXAQ16473 311 aa8.32□□□□□ -1.08
CLSTN1-203ENST00000435891 OR4A5Q8NH83 315 aa8.32□□□□□ -1.08
CLSTN1-203ENST00000435891 TMEM133Q9H2Q1 129 aa8.32□□□□□ -1.08
CLSTN1-203ENST00000435891 PEX7O00628 323 aa8.32□□□□□ -1.08
CLSTN1-203ENST00000435891 GRNP28799 593 aaKnown RBP8.32□□□□□ -1.08
CLSTN1-203ENST00000435891 SLAQ13239 276 aa8.32□□□□□ -1.08
CLSTN1-203ENST00000435891 VMA21Q3ZAQ7 101 aa8.32□□□□□ -1.08
CLSTN1-203ENST00000435891 TNFRSF19Q9NS68 423 aa8.32□□□□□ -1.08
CLSTN1-203ENST00000435891 KAAG1Q9UBP8 84 aa8.32□□□□□ -1.08
CLSTN1-203ENST00000435891 MED13LQ71F56 2210 aa8.31□□□□□ -1.08
CLSTN1-203ENST00000435891 ZNF207O43670 478 aaKnown RBP8.31□□□□□ -1.08
CLSTN1-203ENST00000435891 PRB4P10163 310 aaPredicted RBP8.31□□□□□ -1.08
CLSTN1-203ENST00000435891 GDF5OSQ5U4N7 250 aa8.31□□□□□ -1.08
CLSTN1-203ENST00000435891 SSX8Q7RTT4 187 aa8.31□□□□□ -1.08
CLSTN1-203ENST00000435891 LINC01560Q8TB33 94 aa8.31□□□□□ -1.08
CLSTN1-203ENST00000435891 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.31□□□□□ -1.08
CLSTN1-203ENST00000435891 VWC2LB2RUY7 222 aa8.31□□□□□ -1.08
CLSTN1-203ENST00000435891 SUB1P53999 127 aaKnown RBP eCLIP8.31□□□□□ -1.08
CLSTN1-203ENST00000435891 C8orf31Q8N9H6 132 aa8.31□□□□□ -1.08
CLSTN1-203ENST00000435891 OR4F17Q8NGA8 305 aa8.31□□□□□ -1.08
CLSTN1-203ENST00000435891 ATP6V0BQ99437 205 aa8.31□□□□□ -1.08
CLSTN1-203ENST00000435891 MYCNOSP40205 109 aa8.31□□□□□ -1.08
CLSTN1-203ENST00000435891 GPR6P46095 362 aaPredicted RBP8.31□□□□□ -1.08
CLSTN1-203ENST00000435891 LGALS7P47929 136 aa8.31□□□□□ -1.08
CLSTN1-203ENST00000435891 Q71RC1 249 aaPredicted RBP8.31□□□□□ -1.08
CLSTN1-203ENST00000435891 SPACA3Q8IXA5 215 aa8.31□□□□□ -1.08
CLSTN1-203ENST00000435891 DEFB125Q8N687 156 aa8.31□□□□□ -1.08
CLSTN1-203ENST00000435891 OR1L4Q8NGR5 311 aa8.31□□□□□ -1.08
CLSTN1-203ENST00000435891 SSUH2Q9Y2M2 353 aa8.31□□□□□ -1.08
CLSTN1-203ENST00000435891 TRBV9A0A0B4J1U6 114 aa8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 G3V4G9 280 aa8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 IGLV1-47P01700 117 aa8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 CRYGCP07315 174 aa8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 FAM87AP0C7U9 286 aa8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 COX7A1P24310 79 aa8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 CRYBA4P53673 196 aa8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 MBD6Q96DN6 1003 aa8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 PERPQ96FX8 193 aa8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 K7EQM0 130 aa8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 LY6HO94772 140 aa8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 HTR1DP28221 377 aa8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 MC5RP33032 325 aa8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 TBR1Q16650 682 aa8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 LINC00322Q6ZN03 302 aaPredicted RBP8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 ASCL5Q7RTU5 278 aa8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 PPIAL4CA0A0B4J2A2 164 aa8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 SH2D7A6NKC9 451 aaPredicted RBP8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 AMY1AP04745 511 aa8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 CRYGBP07316 175 aa8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 PPIAL4GP0DN37 164 aa8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 RPL27AP46776 148 aaKnown RBP8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 C7orf69Q9H7B7 122 aa8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 SIGLEC9Q9Y336 463 aa8.3□□□□□ -1.08
CLSTN1-203ENST00000435891 FAM181BA6NEQ2 426 aa8.29□□□□□ -1.08
CLSTN1-203ENST00000435891 IGLC1P0CG04 106 aa8.29□□□□□ -1.08
CLSTN1-203ENST00000435891 BPIFA4PQ86YQ2 179 aa8.29□□□□□ -1.08
CLSTN1-203ENST00000435891 NUP35Q8NFH5 326 aa8.29□□□□□ -1.08
CLSTN1-203ENST00000435891 OR2K2Q8NGT1 345 aa8.29□□□□□ -1.08
CLSTN1-203ENST00000435891 TMEM70Q9BUB7 260 aa8.29□□□□□ -1.08
CLSTN1-203ENST00000435891 FBXL15Q9H469 300 aa8.29□□□□□ -1.08
CLSTN1-203ENST00000435891 IGHV1-3A0A0C4DH29 117 aa8.29□□□□□ -1.08
CLSTN1-203ENST00000435891 IZUMO1RA6ND01 250 aa8.29□□□□□ -1.08
CLSTN1-203ENST00000435891 PGPA6NDG6 321 aa8.29□□□□□ -1.08
CLSTN1-203ENST00000435891 SSBP4Q9BWG4 385 aaPredicted RBP8.29□□□□□ -1.08
CLSTN1-203ENST00000435891 CD5LO43866 347 aa8.29□□□□□ -1.08
CLSTN1-203ENST00000435891 MT-ND6P03923 174 aa8.29□□□□□ -1.08
CLSTN1-203ENST00000435891 APOBEC3AP31941 199 aaPredicted RBP8.29□□□□□ -1.08
CLSTN1-203ENST00000435891 RPS20P60866 119 aaKnown RBP8.29□□□□□ -1.08
CLSTN1-203ENST00000435891 EBLN2Q6P2I7 272 aa8.29□□□□□ -1.08
CLSTN1-203ENST00000435891 RALYQ9UKM9 306 aaKnown RBP8.29□□□□□ -1.08
CLSTN1-203ENST00000435891 INSIG2Q9Y5U4 225 aa8.29□□□□□ -1.08
CLSTN1-203ENST00000435891 SPCS1Q9Y6A9 102 aa8.29□□□□□ -1.08
CLSTN1-203ENST00000435891 TEX22C9J3V5 150 aa8.28□□□□□ -1.08
CLSTN1-203ENST00000435891 SLC25A5P05141 298 aaKnown RBP8.28□□□□□ -1.08
CLSTN1-203ENST00000435891 HIST1H1EP10412 219 aaKnown RBP8.28□□□□□ -1.08
CLSTN1-203ENST00000435891 FOXC1Q12948 553 aa8.28□□□□□ -1.08
CLSTN1-203ENST00000435891 TMEM191AQ9H0A3 160 aa8.28□□□□□ -1.08
CLSTN1-203ENST00000435891 MRPL27Q9P0M9 148 aaKnown RBP8.28□□□□□ -1.08
CLSTN1-203ENST00000435891 EPDR1Q9UM22 224 aa8.28□□□□□ -1.08
CLSTN1-203ENST00000435891 VSTM5A8MXK1 200 aa8.28□□□□□ -1.08
CLSTN1-203ENST00000435891 BUB1B-PAK6H3BSN5 160 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms