RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 TMEM244Q5VVB8 128 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 PATE2Q6UY27 113 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 Q6ZQT0 140 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 WFDC11Q8NEX6 87 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 OR51A4Q8NGJ6 313 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 ZNF418Q8TF45 676 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 BRK1Q8WUW1 75 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 ZNF714Q96N38 554 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 CGREF1Q99674 301 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 BCL2L10Q9HD36 194 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 NIT2Q9NQR4 276 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 PAIP2BQ9ULR5 123 aaKnown RBP1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 BAIAP2Q9UQB8 552 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 HS3ST2Q9Y278 367 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 POLEQ07864 2286 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 PLXNA4Q9HCM2 1894 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 PIK3C2AO00443 1686 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 ADGRL1O94910 1474 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 ERCC6Q03468 1493 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 MEIKINA0A087WXM9 373 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 TRAV13-1A0A0B4J241 112 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 OR51F1A6NGY5 319 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 M0R2Z0 102 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 RER1O15258 196 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 IGLV6-57P01721 117 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 CTSDP07339 412 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 PAEPP09466 180 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 TRGC1P0CF51 173 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 EVI2AP22794 236 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 KDELR1P24390 212 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 RPL22P35268 128 aaKnown RBP1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 FUSP35637 526 aaKnown RBP eCLIP1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 RAB5CP51148 216 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 MYL5Q02045 173 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 ZNF90Q03938 601 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 NNATQ16517 81 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 ZNF791Q3KP31 576 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 TMEM14EPQ6UXP3 125 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 LRRC28Q86X40 367 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 OR4K15Q8NH41 348 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 MRPS24Q96EL2 167 aaKnown RBP1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 AP1S3Q96PC3 154 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 OR5AC2Q9NZP5 309 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 PSORS1C2Q9UIG4 136 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 CCL26Q9Y258 94 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 RIC1Q4ADV7 1423 aa1.45□□□□□ -2.18
HMGB1P9-201ENST00000429856 MYH7P12883 1935 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 MYH6P13533 1939 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 TRPM1Q7Z4N2 1603 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 NCAPD3P42695 1498 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 SCAF11Q99590 1463 aaKnown RBP1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 IGKV1D-42A0A075B6H8 117 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 TMSB15BA0A087X1C1 80 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 TRAV3A0A0B4J244 114 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 MUC21A0A0G2JKD1 596 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 MUC21A0A140T8X8 626 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 SDCBPO00560 298 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 TIMM17BO60830 172 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 MT-ND6P03923 174 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 METTL15P1P0C7V9 234 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 AQP4P55087 323 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 FOXA3P55318 350 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 GLYATL3Q5SZD4 288 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 C7orf65Q6ZTY9 151 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 AAED1Q7RTV5 226 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 DEFB128Q7Z7B8 93 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 Q8IYB0 196 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 OR5D16Q8NGK9 328 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 OR5H6Q8NGV6 325 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 CMTM2Q8TAZ6 248 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 TVP23CQ96ET8 276 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 TP53RKQ96S44 253 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 LPAR5Q9H1C0 372 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 DIDO1Q9BTC0 2240 aaKnown RBP1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 NCKAP5O14513 1909 aa1.44□□□□□ -2.18
HMGB1P9-201ENST00000429856 PLXNA3P51805 1871 aa1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 DSPPQ9NZW4 1301 aa1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 KIAA1549Q9HCM3 1950 aa1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 SPEF2Q9C093 1822 aa1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 MYH1P12882 1939 aa1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 MYH13Q9UKX3 1938 aa1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 RP1P56715 2156 aa1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 HIVEP2P31629 2446 aa1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 TRBV27A0A0K0K1C4 114 aa1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 HMSDA8MTL9 139 aa1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 A8MWV9 139 aa1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 PMP2P02689 132 aa1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 IFNA4P05014 189 aa1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 IGLC6P0CF74 106 aa1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 ZNF705BP0CI00 300 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 LINC00694P0DN24 101 aa1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 CRYGSP22914 178 aa1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 HINT1P49773 126 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 TMEM258P61165 79 aa1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 RRAS2P62070 204 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 KLRD1Q13241 179 aa1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 ZNF345Q14585 488 aa1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 SS18Q15532 418 aa1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 NDUFA5Q16718 116 aa1.43□□□□□ -2.18
HMGB1P9-201ENST00000429856 ESRGQ1W209 222 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms