RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 BMPR1BO00238 502 aa17.02■□□□□ 0.32
VSX1-205ENST00000429762 RPLP1P05386 114 aaKnown RBP17.02■□□□□ 0.32
VSX1-205ENST00000429762 PRB4P10163 310 aaPredicted RBP17.02■□□□□ 0.32
VSX1-205ENST00000429762 GNG5P63218 68 aa17.02■□□□□ 0.32
VSX1-205ENST00000429762 NAT8Q9UHE5 227 aa17.02■□□□□ 0.32
VSX1-205ENST00000429762 ADIRFQ15847 76 aa17.02■□□□□ 0.31
VSX1-205ENST00000429762 TMEM241Q24JQ0 296 aa17.02■□□□□ 0.31
VSX1-205ENST00000429762 MRPS12O15235 138 aaKnown RBP17.01■□□□□ 0.31
VSX1-205ENST00000429762 NDUFS6O75380 124 aaKnown RBP17.01■□□□□ 0.31
VSX1-205ENST00000429762 RELQ04864 619 aaPredicted RBP17.01■□□□□ 0.31
VSX1-205ENST00000429762 BPIFA4PQ86YQ2 179 aa17.01■□□□□ 0.31
VSX1-205ENST00000429762 C11orf52Q96A22 123 aa17.01■□□□□ 0.31
VSX1-205ENST00000429762 SERTAD4Q9NUC0 356 aa17.01■□□□□ 0.31
VSX1-205ENST00000429762 RPH3ALQ9UNE2 315 aa17.01■□□□□ 0.31
VSX1-205ENST00000429762 A0A0G2JLM5 398 aa17■□□□□ 0.31
VSX1-205ENST00000429762 APOHP02749 345 aaPredicted RBP17■□□□□ 0.31
VSX1-205ENST00000429762 HIST1H1EP10412 219 aaKnown RBP17■□□□□ 0.31
VSX1-205ENST00000429762 TRBV20OR9-2A0A075B6H5 130 aa17■□□□□ 0.31
VSX1-205ENST00000429762 PGPA6NDG6 321 aa17■□□□□ 0.31
VSX1-205ENST00000429762 IGLC2P0DOY2 106 aa17■□□□□ 0.31
VSX1-205ENST00000429762 RPL23P62829 140 aaKnown RBP17■□□□□ 0.31
VSX1-205ENST00000429762 UNQ9165/PRO28630Q6UXU0 137 aa17■□□□□ 0.31
VSX1-205ENST00000429762 Q8N2B8 174 aa17■□□□□ 0.31
VSX1-205ENST00000429762 Q9H3A6 140 aa17■□□□□ 0.31
VSX1-205ENST00000429762 SLC17A3O00476 420 aa16.99■□□□□ 0.31
VSX1-205ENST00000429762 SRD5A1P18405 259 aa16.99■□□□□ 0.31
VSX1-205ENST00000429762 SLC35B1P78383 322 aa16.99■□□□□ 0.31
VSX1-205ENST00000429762 RHEBQ15382 184 aa16.99■□□□□ 0.31
VSX1-205ENST00000429762 HIST2H2BDQ6DRA6 164 aa16.99■□□□□ 0.31
VSX1-205ENST00000429762 EXOC3-AS1Q8N2X6 119 aa16.99■□□□□ 0.31
VSX1-205ENST00000429762 OR4F17Q8NGA8 305 aa16.99■□□□□ 0.31
VSX1-205ENST00000429762 MYCNOSP40205 109 aa16.98■□□□□ 0.31
VSX1-205ENST00000429762 RPL35P42766 123 aaKnown RBP16.98■□□□□ 0.31
VSX1-205ENST00000429762 TEX38Q6PEX7 206 aa16.98■□□□□ 0.31
VSX1-205ENST00000429762 Q6ZSV7 163 aa16.98■□□□□ 0.31
VSX1-205ENST00000429762 LINC00479Q96M42 142 aa16.98■□□□□ 0.31
VSX1-205ENST00000429762 ATP6V0BQ99437 205 aa16.98■□□□□ 0.31
VSX1-205ENST00000429762 TMA7Q9Y2S6 64 aaKnown RBP16.98■□□□□ 0.31
VSX1-205ENST00000429762 MTORP42345 2549 aa16.98■□□□□ 0.31
VSX1-205ENST00000429762 SLC25A5P05141 298 aaKnown RBP16.98■□□□□ 0.31
VSX1-205ENST00000429762 OR8I2Q8N0Y5 310 aa16.97■□□□□ 0.31
VSX1-205ENST00000429762 C2CD4CQ8TF44 421 aa16.97■□□□□ 0.31
VSX1-205ENST00000429762 ISOC2Q96AB3 205 aa16.97■□□□□ 0.31
VSX1-205ENST00000429762 TRBV19A0A075B6N1 114 aa16.97■□□□□ 0.31
VSX1-205ENST00000429762 S100A7AQ86SG5 101 aa16.97■□□□□ 0.31
VSX1-205ENST00000429762 SMAD5-AS1Q9Y6J3 95 aa16.97■□□□□ 0.31
VSX1-205ENST00000429762 TRAV34A0A0B4J273 112 aa16.96■□□□□ 0.31
VSX1-205ENST00000429762 PNRC1Q12796 327 aaPredicted RBP16.96■□□□□ 0.31
VSX1-205ENST00000429762 FOXE3Q13461 319 aa16.96■□□□□ 0.31
VSX1-205ENST00000429762 METTL26Q96S19 204 aa16.96■□□□□ 0.31
VSX1-205ENST00000429762 TMEM160Q9NX00 188 aa16.96■□□□□ 0.31
VSX1-205ENST00000429762 TMEM89A2RUT3 159 aa16.95■□□□□ 0.3
VSX1-205ENST00000429762 PEX7O00628 323 aa16.95■□□□□ 0.3
VSX1-205ENST00000429762 SGK494Q96LW2 274 aa16.95■□□□□ 0.3
VSX1-205ENST00000429762 PEF1Q9UBV8 284 aaKnown RBP16.95■□□□□ 0.3
VSX1-205ENST00000429762 ZNF320A2RRD8 509 aa16.95■□□□□ 0.3
VSX1-205ENST00000429762 LINC01551Q86U37 167 aa16.95■□□□□ 0.3
VSX1-205ENST00000429762 HELTA6NFD8 242 aa16.94■□□□□ 0.3
VSX1-205ENST00000429762 BUB3O43684 328 aa16.94■□□□□ 0.3
VSX1-205ENST00000429762 ELANEP08246 267 aa16.94■□□□□ 0.3
VSX1-205ENST00000429762 RNF212Q495C1 297 aa16.94■□□□□ 0.3
VSX1-205ENST00000429762 CENPWQ5EE01 88 aa16.94■□□□□ 0.3
VSX1-205ENST00000429762 C18orf65Q6ZTR6 163 aa16.94■□□□□ 0.3
VSX1-205ENST00000429762 SMCO4Q9NRQ5 59 aa16.94■□□□□ 0.3
VSX1-205ENST00000429762 EPDR1Q9UM22 224 aa16.94■□□□□ 0.3
VSX1-205ENST00000429762 NDUFA4O00483 81 aa16.93■□□□□ 0.3
VSX1-205ENST00000429762 GGCTO75223 188 aaKnown RBP16.93■□□□□ 0.3
VSX1-205ENST00000429762 RPL7P18124 248 aaKnown RBP16.93■□□□□ 0.3
VSX1-205ENST00000429762 KLHDC1Q8N7A1 406 aa16.93■□□□□ 0.3
VSX1-205ENST00000429762 OCC1Q8TAD7 63 aa16.93■□□□□ 0.3
VSX1-205ENST00000429762 OTORQ9NRC9 128 aa16.93■□□□□ 0.3
VSX1-205ENST00000429762 SELENOKQ9Y6D0 94 aa16.93■□□□□ 0.3
VSX1-205ENST00000429762 HIVEP2P31629 2446 aa16.93■□□□□ 0.3
VSX1-205ENST00000429762 INAFM1C9JVW0 142 aa16.93■□□□□ 0.3
VSX1-205ENST00000429762 TSPAN4O14817 238 aa16.93■□□□□ 0.3
VSX1-205ENST00000429762 IGFL4Q6B9Z1 124 aa16.93■□□□□ 0.3
VSX1-205ENST00000429762 SIGLEC15Q6ZMC9 328 aa16.93■□□□□ 0.3
VSX1-205ENST00000429762 CD99P14209 185 aa16.92■□□□□ 0.3
VSX1-205ENST00000429762 EDN2P20800 178 aa16.92■□□□□ 0.3
VSX1-205ENST00000429762 MYOZ3Q8TDC0 251 aa16.92■□□□□ 0.3
VSX1-205ENST00000429762 CDC42EP3Q9UKI2 254 aa16.92■□□□□ 0.3
VSX1-205ENST00000429762 ATF4P18848 351 aaPredicted RBP16.91■□□□□ 0.3
VSX1-205ENST00000429762 NHLRC2Q8NBF2 726 aa16.91■□□□□ 0.3
VSX1-205ENST00000429762 K7EN84 100 aa16.91■□□□□ 0.3
VSX1-205ENST00000429762 C5orf17Q8NAS9 161 aa16.91■□□□□ 0.3
VSX1-205ENST00000429762 ZNF418Q8TF45 676 aaPredicted RBP16.91■□□□□ 0.3
VSX1-205ENST00000429762 U3KQE9 123 aa16.91■□□□□ 0.3
VSX1-205ENST00000429762 B4DEV8 164 aa16.9■□□□□ 0.3
VSX1-205ENST00000429762 ISLRO14498 428 aa16.9■□□□□ 0.3
VSX1-205ENST00000429762 RNASE1P07998 156 aaKnown RBP16.9■□□□□ 0.3
VSX1-205ENST00000429762 GNG4P50150 75 aa16.9■□□□□ 0.3
VSX1-205ENST00000429762 CNN1P51911 297 aaKnown RBP16.9■□□□□ 0.3
VSX1-205ENST00000429762 SCGB2A2Q13296 93 aa16.9■□□□□ 0.3
VSX1-205ENST00000429762 TM4SF20Q53R12 229 aa16.9■□□□□ 0.3
VSX1-205ENST00000429762 FAM209BQ5JX69 171 aa16.9■□□□□ 0.3
VSX1-205ENST00000429762 TMEM190Q8WZ59 177 aa16.9■□□□□ 0.3
VSX1-205ENST00000429762 IGF2BP2-AS1Q96M15 143 aa16.9■□□□□ 0.3
VSX1-205ENST00000429762 A0A087WWC5 75 aa16.89■□□□□ 0.3
VSX1-205ENST00000429762 ZNF785A8K8V0 405 aa16.89■□□□□ 0.3
VSX1-205ENST00000429762 CLDN34H7C241 214 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms