RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 FOXL1Q12952 345 aa13.74□□□□□ -0.21
SMARCA4-203ENST00000429416 TMEM95Q3KNT9 176 aa13.74□□□□□ -0.21
SMARCA4-203ENST00000429416 LEPROTL1O95214 131 aa13.73□□□□□ -0.21
SMARCA4-203ENST00000429416 GCSHP23434 173 aa13.73□□□□□ -0.21
SMARCA4-203ENST00000429416 A0A1W2PRE2 83 aa13.73□□□□□ -0.21
SMARCA4-203ENST00000429416 H3BVH4 76 aa13.73□□□□□ -0.21
SMARCA4-203ENST00000429416 A0A087WX48 190 aa13.73□□□□□ -0.21
SMARCA4-203ENST00000429416 FGF16O43320 207 aa13.73□□□□□ -0.21
SMARCA4-203ENST00000429416 SRSF8Q9BRL6 282 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-203ENST00000429416 TPSG1Q9NRR2 321 aa13.73□□□□□ -0.21
SMARCA4-203ENST00000429416 A0A0G2JRQ6 117 aa13.73□□□□□ -0.21
SMARCA4-203ENST00000429416 TRGC2P03986 189 aa13.73□□□□□ -0.21
SMARCA4-203ENST00000429416 NCOR1P1Q9H4R4 102 aa13.73□□□□□ -0.21
SMARCA4-203ENST00000429416 TGIF2-C20orf24A0A0A6YYL0 155 aa13.72□□□□□ -0.21
SMARCA4-203ENST00000429416 C5orf52A6NGY3 159 aa13.72□□□□□ -0.21
SMARCA4-203ENST00000429416 TOMM40O96008 361 aa13.72□□□□□ -0.21
SMARCA4-203ENST00000429416 FBXL19-AS1Q494R0 122 aa13.72□□□□□ -0.21
SMARCA4-203ENST00000429416 VN1R17PQ8TDU5 208 aa13.72□□□□□ -0.21
SMARCA4-203ENST00000429416 C18orf15Q96N68 181 aa13.72□□□□□ -0.21
SMARCA4-203ENST00000429416 MGST2Q99735 147 aa13.72□□□□□ -0.21
SMARCA4-203ENST00000429416 VSIRQ9H7M9 311 aa13.72□□□□□ -0.21
SMARCA4-203ENST00000429416 RNASE7Q9H1E1 156 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-203ENST00000429416 C11orf91Q3C1V1 193 aa13.72□□□□□ -0.21
SMARCA4-203ENST00000429416 LINC00311Q8N616 119 aa13.72□□□□□ -0.21
SMARCA4-203ENST00000429416 Q8TAT8 98 aa13.72□□□□□ -0.21
SMARCA4-203ENST00000429416 PRADC1Q9BSG0 188 aa13.72□□□□□ -0.21
SMARCA4-203ENST00000429416 ZNF134P52741 427 aa13.72□□□□□ -0.21
SMARCA4-203ENST00000429416 MST1LQ2TV78 715 aa13.72□□□□□ -0.21
SMARCA4-203ENST00000429416 OR10J3Q5JRS4 329 aa13.72□□□□□ -0.21
SMARCA4-203ENST00000429416 IFITM10A6NMD0 228 aa13.71□□□□□ -0.21
SMARCA4-203ENST00000429416 ELANEP08246 267 aa13.71□□□□□ -0.21
SMARCA4-203ENST00000429416 MALP21145 153 aa13.71□□□□□ -0.21
SMARCA4-203ENST00000429416 CBLN1P23435 193 aa13.71□□□□□ -0.21
SMARCA4-203ENST00000429416 SEPSECSQ9HD40 501 aaKnown RBP13.71□□□□□ -0.21
SMARCA4-203ENST00000429416 WDR87Q6ZQQ6 2873 aa13.71□□□□□ -0.21
SMARCA4-203ENST00000429416 Q6ZRM9 215 aa13.71□□□□□ -0.21
SMARCA4-203ENST00000429416 TSSC4Q9Y5U2 329 aaPredicted RBP13.71□□□□□ -0.21
SMARCA4-203ENST00000429416 LGALS3P17931 250 aaKnown RBP13.71□□□□□ -0.21
SMARCA4-203ENST00000429416 PUSL1Q8N0Z8 303 aaKnown RBP13.71□□□□□ -0.21
SMARCA4-203ENST00000429416 NRN1Q9NPD7 142 aa13.71□□□□□ -0.21
SMARCA4-203ENST00000429416 CEP295Q9C0D2 2601 aa13.71□□□□□ -0.21
SMARCA4-203ENST00000429416 TMEM50AO95807 157 aa13.71□□□□□ -0.22
SMARCA4-203ENST00000429416 OR10AG1Q8NH19 301 aa13.71□□□□□ -0.22
SMARCA4-203ENST00000429416 TMEM170BQ5T4T1 132 aa13.7□□□□□ -0.22
SMARCA4-203ENST00000429416 CENPVL3A0A0U1RRI6 287 aa13.7□□□□□ -0.22
SMARCA4-203ENST00000429416 HIGD1CA8MV81 97 aa13.7□□□□□ -0.22
SMARCA4-203ENST00000429416 ZNF138P52744 262 aa13.7□□□□□ -0.22
SMARCA4-203ENST00000429416 C2orf88Q9BSF0 95 aa13.7□□□□□ -0.22
SMARCA4-203ENST00000429416 WFDC1Q9HC57 220 aa13.7□□□□□ -0.22
SMARCA4-203ENST00000429416 TLN1Q9Y490 2541 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-203ENST00000429416 C15orf65H3BRN8 121 aa13.7□□□□□ -0.22
SMARCA4-203ENST00000429416 DEFB136Q30KP8 78 aa13.7□□□□□ -0.22
SMARCA4-203ENST00000429416 C7orf71A4D174 169 aa13.7□□□□□ -0.22
SMARCA4-203ENST00000429416 BIVMQ86UB2 503 aa13.7□□□□□ -0.22
SMARCA4-203ENST00000429416 C11orf53Q8IXP5 236 aa13.7□□□□□ -0.22
SMARCA4-203ENST00000429416 C12orf57Q99622 126 aa13.7□□□□□ -0.22
SMARCA4-203ENST00000429416 PRO1933Q9H354 126 aa13.7□□□□□ -0.22
SMARCA4-203ENST00000429416 Q6AWC8 147 aa13.69□□□□□ -0.22
SMARCA4-203ENST00000429416 IGKV3D-20A0A0C4DH25 116 aa13.69□□□□□ -0.22
SMARCA4-203ENST00000429416 PSCAO43653 123 aa13.69□□□□□ -0.22
SMARCA4-203ENST00000429416 PCDH15Q96QU1 1955 aa13.69□□□□□ -0.22
SMARCA4-203ENST00000429416 HSPB9Q9BQS6 159 aa13.69□□□□□ -0.22
SMARCA4-203ENST00000429416 C15orf62A8K5M9 175 aa13.69□□□□□ -0.22
SMARCA4-203ENST00000429416 DIRC3C9JPN6 131 aa13.69□□□□□ -0.22
SMARCA4-203ENST00000429416 H7C2G1 150 aa13.69□□□□□ -0.22
SMARCA4-203ENST00000429416 CIRBPQ14011 172 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-203ENST00000429416 TMEM14EPQ6UXP3 125 aa13.69□□□□□ -0.22
SMARCA4-203ENST00000429416 CCL20P78556 96 aa13.68□□□□□ -0.22
SMARCA4-203ENST00000429416 TMEM70Q9BUB7 260 aa13.68□□□□□ -0.22
SMARCA4-203ENST00000429416 ST20Q9HBF5 79 aa13.68□□□□□ -0.22
SMARCA4-203ENST00000429416 CFAP161Q6P656 301 aa13.68□□□□□ -0.22
SMARCA4-203ENST00000429416 WFDC11Q8NEX6 87 aa13.68□□□□□ -0.22
SMARCA4-203ENST00000429416 C1orf147Q96MC9 270 aaPredicted RBP13.68□□□□□ -0.22
SMARCA4-203ENST00000429416 CXorf65A6NEN9 183 aa13.67□□□□□ -0.22
SMARCA4-203ENST00000429416 ZMAT4Q9H898 229 aa13.67□□□□□ -0.22
SMARCA4-203ENST00000429416 PGPEP1LA6NFU8 196 aa13.67□□□□□ -0.22
SMARCA4-203ENST00000429416 C8orf86Q6ZUL3 223 aa13.67□□□□□ -0.22
SMARCA4-203ENST00000429416 LINC00477Q96M19 166 aa13.67□□□□□ -0.22
SMARCA4-203ENST00000429416 CCL24O00175 119 aa13.67□□□□□ -0.22
SMARCA4-203ENST00000429416 CA1P00915 261 aaPredicted RBP13.67□□□□□ -0.22
SMARCA4-203ENST00000429416 SCGB3A1Q96QR1 104 aa13.67□□□□□ -0.22
SMARCA4-203ENST00000429416 SPTBN4Q9H254 2564 aa13.67□□□□□ -0.22
SMARCA4-203ENST00000429416 BLCAPP62952 87 aa13.67□□□□□ -0.22
SMARCA4-203ENST00000429416 IL36BQ9NZH7 164 aa13.67□□□□□ -0.22
SMARCA4-203ENST00000429416 PAM16Q9Y3D7 125 aa13.67□□□□□ -0.22
SMARCA4-203ENST00000429416 RPLP1P05386 114 aaKnown RBP13.66□□□□□ -0.22
SMARCA4-203ENST00000429416 FREM1Q5H8C1 2179 aa13.66□□□□□ -0.22
SMARCA4-203ENST00000429416 SRP19P09132 144 aaKnown RBP13.66□□□□□ -0.22
SMARCA4-203ENST00000429416 NDUFA4L2Q9NRX3 87 aa13.66□□□□□ -0.22
SMARCA4-203ENST00000429416 OR13C6PQ8NH95 151 aa13.66□□□□□ -0.22
SMARCA4-203ENST00000429416 ALKBH7Q9BT30 221 aaPredicted RBP13.66□□□□□ -0.22
SMARCA4-203ENST00000429416 RNASE1P07998 156 aaKnown RBP13.66□□□□□ -0.22
SMARCA4-203ENST00000429416 TMEM158Q8WZ71 300 aa13.66□□□□□ -0.22
SMARCA4-203ENST00000429416 COTL1Q14019 142 aa13.65□□□□□ -0.22
SMARCA4-203ENST00000429416 F5H768 121 aa13.65□□□□□ -0.22
SMARCA4-203ENST00000429416 PSG3Q16557 428 aa13.65□□□□□ -0.22
SMARCA4-203ENST00000429416 ORMDL3Q8N138 153 aa13.65□□□□□ -0.22
SMARCA4-203ENST00000429416 DEFB104AQ8WTQ1 72 aa13.65□□□□□ -0.22
SMARCA4-203ENST00000429416 SPINK13Q1W4C9 94 aa13.65□□□□□ -0.22
SMARCA4-203ENST00000429416 TMEM14BQ9NUH8 114 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms