RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 CNIH1O95406 144 aa6□□□□□ -1.45
SMARCC1-202ENST00000425518 MUC15Q8N387 334 aa6□□□□□ -1.45
SMARCC1-202ENST00000425518 LINC00311Q8N616 119 aa6□□□□□ -1.45
SMARCC1-202ENST00000425518 TMEM116Q8NCL8 245 aa6□□□□□ -1.45
SMARCC1-202ENST00000425518 RNASE8Q8TDE3 154 aaKnown RBP6□□□□□ -1.45
SMARCC1-202ENST00000425518 TMEM133Q9H2Q1 129 aa6□□□□□ -1.45
SMARCC1-202ENST00000425518 SIGLEC9Q9Y336 463 aa6□□□□□ -1.45
SMARCC1-202ENST00000425518 ATMQ13315 3056 aa6□□□□□ -1.45
SMARCC1-202ENST00000425518 LOC102724200A0A096LPH7 203 aaPredicted RBP6□□□□□ -1.45
SMARCC1-202ENST00000425518 CBY3A6NI87 242 aa6□□□□□ -1.45
SMARCC1-202ENST00000425518 KLK10O43240 276 aa6□□□□□ -1.45
SMARCC1-202ENST00000425518 THBDP07204 575 aa6□□□□□ -1.45
SMARCC1-202ENST00000425518 TMEM155Q4W5P6 130 aa6□□□□□ -1.45
SMARCC1-202ENST00000425518 FAM120AOSQ5T036 256 aa6□□□□□ -1.45
SMARCC1-202ENST00000425518 TEX45Q8NA69 505 aa6□□□□□ -1.45
SMARCC1-202ENST00000425518 OR4C5Q8NGB2 326 aa6□□□□□ -1.45
SMARCC1-202ENST00000425518 RNASE6Q93091 150 aaKnown RBP6□□□□□ -1.45
SMARCC1-202ENST00000425518 RASL11BQ9BPW5 248 aa6□□□□□ -1.45
SMARCC1-202ENST00000425518 MAP1LC3CQ9BXW4 147 aa6□□□□□ -1.45
SMARCC1-202ENST00000425518 SLC25A39Q9BZJ4 359 aaPredicted RBP6□□□□□ -1.45
SMARCC1-202ENST00000425518 TMEM191AQ9H0A3 160 aa6□□□□□ -1.45
SMARCC1-202ENST00000425518 CHD8Q9HCK8 2581 aa5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 TMSB15BA0A087X1C1 80 aa5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 IGHV1-69-2A0A0G2JMI3 117 aa5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 SLC25A34Q6PIV7 304 aa5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 PPP1R27Q86WC6 154 aa5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 IGFBPL1Q8WX77 278 aa5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 CHCHD1Q96BP2 118 aaKnown RBP5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 SERTM2A0A1B0GWG4 89 aa5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 FBLN7Q53RD9 439 aa5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 Q86TA4 180 aa5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 OTORQ9NRC9 128 aa5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 F11RQ9Y624 299 aaKnown RBP5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 MUC21A0A0G2JKD1 596 aa5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 MUC21A0A140T8X8 626 aa5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 ARMS2P0C7Q2 107 aa5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 DLX6P56179 175 aa5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 TCTAP57738 103 aa5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 RNF151Q2KHN1 245 aa5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 MUC21Q5SSG8 566 aa5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 IGFL3Q6UXB1 125 aa5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 RPEQ96AT9 228 aa5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 ZNF492Q9P255 531 aa5.99□□□□□ -1.45
SMARCC1-202ENST00000425518 IGHV1-3A0A0C4DH29 117 aa5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 LOC389332A0A1B0GUA5 103 aa5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 APOHP02749 345 aaPredicted RBP5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 LIPFP07098 398 aa5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 IGLC1P0CG04 106 aa5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 CT83Q5H943 113 aa5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 FAM71F2Q6NXP2 309 aa5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 ASCL5Q7RTU5 278 aa5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 PRSS3P2Q8NHM4 247 aa5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 SMIM12Q96EX1 92 aa5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 ST20Q9HBF5 79 aa5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 SOX21Q9Y651 276 aaPredicted RBP5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 AKAP13Q12802 2813 aa5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 NCOR2Q9Y618 2525 aa5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 A0A1B0GUT8 65 aa5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 M0R3E3 92 aa5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 OR5AL1P0C617 328 aa5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 KLF17Q5JT82 389 aaPredicted RBP5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 ZC2HC1AQ96GY0 325 aa5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 NDFIP1Q9BT67 221 aa5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 RNF24Q9Y225 148 aa5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 ACACBO00763 2458 aa5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 TLN1Q9Y490 2541 aaKnown RBP5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 A0A087X0K7 114 aa5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 FCGR2BP31994 310 aaPredicted RBP5.98□□□□□ -1.45
SMARCC1-202ENST00000425518 E7EQL1 145 aa5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 TNFRSF13BO14836 293 aaPredicted RBP5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 GFRALQ6UXV0 394 aa5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 FA2HQ7L5A8 372 aa5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 GFRA4Q9GZZ7 299 aa5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 HSPB8Q9UJY1 196 aa5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 RALYQ9UKM9 306 aaKnown RBP5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 TEX22C9J3V5 150 aa5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 IGLV2-11P01706 119 aa5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 RIGQ13278 110 aa5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 BPIFA4PQ86YQ2 179 aa5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 C8orf31Q8N9H6 132 aa5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 NGBQ9NPG2 151 aa5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 AP5S1Q9NUS5 200 aa5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 PSG8Q9UQ74 426 aa5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 CEP295Q9C0D2 2601 aa5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 BUB1B-PAK6H3BSN5 160 aa5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 HAX1O00165 279 aa5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 CRXO43186 299 aaPredicted RBP5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 IGKV1-17P01599 117 aa5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 HLA-DRB1P01911 266 aa5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 IL4P05112 153 aa5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 FXYD7P58549 80 aa5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 NEU4Q8WWR8 484 aaPredicted RBP5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 SCNM1Q9BWG6 230 aa5.97□□□□□ -1.45
SMARCC1-202ENST00000425518 LOC105371242A0A075B767 164 aa5.96□□□□□ -1.45
SMARCC1-202ENST00000425518 OR2T8A6NH00 312 aa5.96□□□□□ -1.45
SMARCC1-202ENST00000425518 CRYGBP07316 175 aa5.96□□□□□ -1.45
SMARCC1-202ENST00000425518 PLP1P60201 277 aa5.96□□□□□ -1.45
SMARCC1-202ENST00000425518 PET117Q6UWS5 81 aa5.96□□□□□ -1.45
SMARCC1-202ENST00000425518 OR8A1Q8NGG7 326 aa5.96□□□□□ -1.45
SMARCC1-202ENST00000425518 HILPDAQ9Y5L2 63 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms