RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 SMCO1Q147U7 214 aa10.77□□□□□ -0.69
RPUSD3-204ENST00000424438 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.77□□□□□ -0.69
RPUSD3-204ENST00000424438 RSG1Q9BU20 258 aa10.77□□□□□ -0.69
RPUSD3-204ENST00000424438 VCX3AQ9NNX9 186 aa10.77□□□□□ -0.69
RPUSD3-204ENST00000424438 SHPKQ9UHJ6 478 aa10.77□□□□□ -0.69
RPUSD3-204ENST00000424438 IGKV1OR2-108A0A075B7D4 117 aa10.76□□□□□ -0.69
RPUSD3-204ENST00000424438 ADAP1O75689 374 aa10.76□□□□□ -0.69
RPUSD3-204ENST00000424438 M6PRP20645 277 aa10.76□□□□□ -0.69
RPUSD3-204ENST00000424438 Q6ZRN7 208 aaPredicted RBP10.76□□□□□ -0.69
RPUSD3-204ENST00000424438 BAP18Q8IXM2 172 aa10.76□□□□□ -0.69
RPUSD3-204ENST00000424438 RNASE8Q8TDE3 154 aaKnown RBP10.76□□□□□ -0.69
RPUSD3-204ENST00000424438 TMEM263Q8WUH6 116 aaKnown RBP10.76□□□□□ -0.69
RPUSD3-204ENST00000424438 GNPNAT1Q96EK6 184 aaPredicted RBP10.76□□□□□ -0.69
RPUSD3-204ENST00000424438 C20orf144Q9BQM9 153 aa10.76□□□□□ -0.69
RPUSD3-204ENST00000424438 RBKSQ9H477 322 aa10.76□□□□□ -0.69
RPUSD3-204ENST00000424438 KCNIP3Q9Y2W7 256 aa10.76□□□□□ -0.69
RPUSD3-204ENST00000424438 TRAV8-2A0A0B4J237 113 aa10.75□□□□□ -0.69
RPUSD3-204ENST00000424438 PRM2P04554 102 aa10.75□□□□□ -0.69
RPUSD3-204ENST00000424438 FCN2Q15485 313 aa10.75□□□□□ -0.69
RPUSD3-204ENST00000424438 TMEM144Q7Z5S9 345 aa10.75□□□□□ -0.69
RPUSD3-204ENST00000424438 AP3S1Q92572 193 aa10.75□□□□□ -0.69
RPUSD3-204ENST00000424438 FAM25AB3EWG3 89 aa10.74□□□□□ -0.69
RPUSD3-204ENST00000424438 FAM25CB3EWG5 89 aa10.74□□□□□ -0.69
RPUSD3-204ENST00000424438 FAM25GB3EWG6 89 aa10.74□□□□□ -0.69
RPUSD3-204ENST00000424438 DISC1C4P0D8 188 aa10.74□□□□□ -0.69
RPUSD3-204ENST00000424438 ZNF182P17025 639 aaPredicted RBP10.74□□□□□ -0.69
RPUSD3-204ENST00000424438 XGP55808 180 aa10.74□□□□□ -0.69
RPUSD3-204ENST00000424438 RAB11AP62491 216 aa10.74□□□□□ -0.69
RPUSD3-204ENST00000424438 OR2F1Q13607 317 aa10.74□□□□□ -0.69
RPUSD3-204ENST00000424438 LINC01587Q99440 93 aa10.74□□□□□ -0.69
RPUSD3-204ENST00000424438 VPS13BQ7Z7G8 4022 aa10.74□□□□□ -0.69
RPUSD3-204ENST00000424438 TRAV26-1A0A087WT03 109 aa10.73□□□□□ -0.69
RPUSD3-204ENST00000424438 H7BYZ3 331 aa10.73□□□□□ -0.69
RPUSD3-204ENST00000424438 AKR1C4P17516 323 aa10.73□□□□□ -0.69
RPUSD3-204ENST00000424438 NCS1P62166 190 aa10.73□□□□□ -0.69
RPUSD3-204ENST00000424438 SRPXP78539 464 aa10.73□□□□□ -0.69
RPUSD3-204ENST00000424438 ESRGQ1W209 222 aa10.73□□□□□ -0.69
RPUSD3-204ENST00000424438 RNASE12Q5GAN4 147 aaKnown RBP10.73□□□□□ -0.69
RPUSD3-204ENST00000424438 BPIFCQ8NFQ6 507 aa10.73□□□□□ -0.69
RPUSD3-204ENST00000424438 OR8A1Q8NGG7 326 aa10.73□□□□□ -0.69
RPUSD3-204ENST00000424438 PRRT1Q99946 306 aa10.73□□□□□ -0.69
RPUSD3-204ENST00000424438 SLC25A22Q9H936 323 aa10.73□□□□□ -0.69
RPUSD3-204ENST00000424438 EXTL2Q9UBQ6 330 aa10.73□□□□□ -0.69
RPUSD3-204ENST00000424438 FAT1Q14517 4588 aa10.72□□□□□ -0.69
RPUSD3-204ENST00000424438 A0A087WXM4 84 aa10.72□□□□□ -0.69
RPUSD3-204ENST00000424438 DUXBA0A1W2PPF3 345 aa10.72□□□□□ -0.69
RPUSD3-204ENST00000424438 ZNF701M0R085 212 aaPredicted RBP10.72□□□□□ -0.69
RPUSD3-204ENST00000424438 EREGO14944 169 aa10.72□□□□□ -0.69
RPUSD3-204ENST00000424438 PITX3O75364 302 aa10.72□□□□□ -0.69
RPUSD3-204ENST00000424438 ATP6V1G2O95670 118 aa10.72□□□□□ -0.69
RPUSD3-204ENST00000424438 RPL7P18124 248 aaKnown RBP10.72□□□□□ -0.69
RPUSD3-204ENST00000424438 OR1S1Q8NH92 325 aa10.72□□□□□ -0.69
RPUSD3-204ENST00000424438 NOP10Q9NPE3 64 aaKnown RBP10.72□□□□□ -0.69
RPUSD3-204ENST00000424438 ZNF586Q9NXT0 402 aa10.72□□□□□ -0.69
RPUSD3-204ENST00000424438 TRAV12-2A0A075B6T6 113 aa10.71□□□□□ -0.69
RPUSD3-204ENST00000424438 A0A087X0K7 114 aa10.71□□□□□ -0.69
RPUSD3-204ENST00000424438 PRSS46E5RG02 174 aa10.71□□□□□ -0.69
RPUSD3-204ENST00000424438 SLC25A6P12236 298 aa10.71□□□□□ -0.69
RPUSD3-204ENST00000424438 CDKN1BP46527 198 aa10.71□□□□□ -0.69
RPUSD3-204ENST00000424438 LINC00315P59091 139 aa10.71□□□□□ -0.69
RPUSD3-204ENST00000424438 VBP1P61758 197 aa10.71□□□□□ -0.69
RPUSD3-204ENST00000424438 C4orf46Q504U0 113 aa10.71□□□□□ -0.69
RPUSD3-204ENST00000424438 ZNF738Q8NE65 137 aa10.71□□□□□ -0.69
RPUSD3-204ENST00000424438 SMIM4Q8WVI0 70 aa10.71□□□□□ -0.69
RPUSD3-204ENST00000424438 SCGB3A2Q96PL1 93 aa10.71□□□□□ -0.69
RPUSD3-204ENST00000424438 TMEM147Q9BVK8 224 aa10.71□□□□□ -0.69
RPUSD3-204ENST00000424438 FUNDC2Q9BWH2 189 aa10.71□□□□□ -0.69
RPUSD3-204ENST00000424438 SLC25A39Q9BZJ4 359 aaPredicted RBP10.71□□□□□ -0.69
RPUSD3-204ENST00000424438 H3BRN7 92 aa10.7□□□□□ -0.7
RPUSD3-204ENST00000424438 AKAIN1P0CW23 69 aa10.7□□□□□ -0.7
RPUSD3-204ENST00000424438 CXCL3P19876 107 aa10.7□□□□□ -0.7
RPUSD3-204ENST00000424438 OR5I1Q13606 314 aa10.7□□□□□ -0.7
RPUSD3-204ENST00000424438 LYZL2Q7Z4W2 148 aa10.7□□□□□ -0.7
RPUSD3-204ENST00000424438 CIB3Q96Q77 187 aaPredicted RBP10.7□□□□□ -0.7
RPUSD3-204ENST00000424438 SHANK2-AS3Q9BTD1 123 aa10.7□□□□□ -0.7
RPUSD3-204ENST00000424438 RABL2AQ9UBK7 228 aaPredicted RBP10.7□□□□□ -0.7
RPUSD3-204ENST00000424438 RABL2BQ9UNT1 228 aa10.7□□□□□ -0.7
RPUSD3-204ENST00000424438 MED6O75586 246 aa10.69□□□□□ -0.7
RPUSD3-204ENST00000424438 ANXA3P12429 323 aa10.69□□□□□ -0.7
RPUSD3-204ENST00000424438 PLP1P60201 277 aa10.69□□□□□ -0.7
RPUSD3-204ENST00000424438 ERVFC1-1P60608 527 aa10.69□□□□□ -0.7
RPUSD3-204ENST00000424438 RPP30P78346 268 aaKnown RBP10.69□□□□□ -0.7
RPUSD3-204ENST00000424438 HIST1H1AQ02539 215 aaPredicted RBP10.69□□□□□ -0.7
RPUSD3-204ENST00000424438 PSG3Q16557 428 aa10.69□□□□□ -0.7
RPUSD3-204ENST00000424438 FAAP20Q6NZ36 180 aa10.69□□□□□ -0.7
RPUSD3-204ENST00000424438 S100A7AQ86SG5 101 aa10.69□□□□□ -0.7
RPUSD3-204ENST00000424438 RNF182Q8N6D2 247 aa10.69□□□□□ -0.7
RPUSD3-204ENST00000424438 RNF24Q9Y225 148 aa10.69□□□□□ -0.7
RPUSD3-204ENST00000424438 CTDSPLO15194 276 aa10.68□□□□□ -0.7
RPUSD3-204ENST00000424438 ORM2P19652 201 aa10.68□□□□□ -0.7
RPUSD3-204ENST00000424438 CXCL2P19875 107 aa10.68□□□□□ -0.7
RPUSD3-204ENST00000424438 HOXA5P20719 270 aa10.68□□□□□ -0.7
RPUSD3-204ENST00000424438 RHOBP62745 196 aa10.68□□□□□ -0.7
RPUSD3-204ENST00000424438 UHRF2Q96PU4 802 aa10.68□□□□□ -0.7
RPUSD3-204ENST00000424438 PPP1R14DQ9NXH3 145 aa10.68□□□□□ -0.7
RPUSD3-204ENST00000424438 DAZ2Q13117 558 aaKnown RBP10.67□□□□□ -0.7
RPUSD3-204ENST00000424438 IGFL4Q6B9Z1 124 aa10.67□□□□□ -0.7
RPUSD3-204ENST00000424438 ACOT7LQ6ZUV0 252 aa10.67□□□□□ -0.7
RPUSD3-204ENST00000424438 NFE4Q86UQ8 179 aa10.67□□□□□ -0.7
RPUSD3-204ENST00000424438 CCDC28AQ8IWP9 274 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms