RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 HOXA5P20719 270 aa9.63□□□□□ -0.87
PTPRF-205ENST00000414879 CR1LQ2VPA4 569 aa9.63□□□□□ -0.87
PTPRF-205ENST00000414879 SPATA31B1PQ5VZV4 182 aa9.63□□□□□ -0.87
PTPRF-205ENST00000414879 MCRIP2Q9BUT9 160 aaKnown RBP9.63□□□□□ -0.87
PTPRF-205ENST00000414879 TRAV5A0A0B4J249 113 aa9.63□□□□□ -0.87
PTPRF-205ENST00000414879 ATP6V0E1O15342 81 aa9.63□□□□□ -0.87
PTPRF-205ENST00000414879 NUDT10Q8NFP7 164 aa9.63□□□□□ -0.87
PTPRF-205ENST00000414879 NUDT11Q96G61 164 aa9.63□□□□□ -0.87
PTPRF-205ENST00000414879 DMRT1Q9Y5R6 373 aa9.63□□□□□ -0.87
PTPRF-205ENST00000414879 LCN12Q6JVE5 192 aa9.63□□□□□ -0.87
PTPRF-205ENST00000414879 KLHL30-AS1Q8NEE0 82 aa9.63□□□□□ -0.87
PTPRF-205ENST00000414879 SMPXQ9UHP9 88 aa9.63□□□□□ -0.87
PTPRF-205ENST00000414879 FOXA3P55318 350 aaPredicted RBP9.62□□□□□ -0.87
PTPRF-205ENST00000414879 CT83Q5H943 113 aa9.62□□□□□ -0.87
PTPRF-205ENST00000414879 ZNF492Q9P255 531 aa9.62□□□□□ -0.87
PTPRF-205ENST00000414879 IFI27P40305 119 aaPredicted RBP9.62□□□□□ -0.87
PTPRF-205ENST00000414879 CYSLTR1Q9Y271 337 aa9.62□□□□□ -0.87
PTPRF-205ENST00000414879 HBDP02042 147 aa9.62□□□□□ -0.87
PTPRF-205ENST00000414879 TMEM249Q2WGJ8 235 aa9.62□□□□□ -0.87
PTPRF-205ENST00000414879 LYPD6Q86Y78 171 aa9.62□□□□□ -0.87
PTPRF-205ENST00000414879 THAP8Q8NA92 274 aa9.62□□□□□ -0.87
PTPRF-205ENST00000414879 LINC00527Q9UJ94 153 aa9.62□□□□□ -0.87
PTPRF-205ENST00000414879 K7EM74 188 aa9.62□□□□□ -0.87
PTPRF-205ENST00000414879 INSP01308 110 aa9.62□□□□□ -0.87
PTPRF-205ENST00000414879 TTC9CQ8N5M4 171 aa9.62□□□□□ -0.87
PTPRF-205ENST00000414879 TMEM75Q8N9X5 138 aa9.62□□□□□ -0.87
PTPRF-205ENST00000414879 LINC01619G3V211 115 aa9.61□□□□□ -0.87
PTPRF-205ENST00000414879 FSTL3O95633 263 aa9.61□□□□□ -0.87
PTPRF-205ENST00000414879 NSUN5P1Q3KNT7 163 aa9.61□□□□□ -0.87
PTPRF-205ENST00000414879 ATP6V0BQ99437 205 aa9.61□□□□□ -0.87
PTPRF-205ENST00000414879 VPS25Q9BRG1 176 aa9.61□□□□□ -0.87
PTPRF-205ENST00000414879 RPL15P61313 204 aaKnown RBP9.61□□□□□ -0.87
PTPRF-205ENST00000414879 KLF17Q5JT82 389 aaPredicted RBP9.61□□□□□ -0.87
PTPRF-205ENST00000414879 LHFPL4Q7Z7J7 247 aa9.61□□□□□ -0.87
PTPRF-205ENST00000414879 AKAP6Q13023 2319 aa9.61□□□□□ -0.87
PTPRF-205ENST00000414879 SUMO2P61956 95 aaKnown RBP9.61□□□□□ -0.87
PTPRF-205ENST00000414879 ABCA4P78363 2273 aa9.6□□□□□ -0.87
PTPRF-205ENST00000414879 PKDREJQ9NTG1 2253 aa9.6□□□□□ -0.87
PTPRF-205ENST00000414879 PAX9P55771 341 aa9.6□□□□□ -0.87
PTPRF-205ENST00000414879 DEFB113Q30KQ7 82 aa9.6□□□□□ -0.87
PTPRF-205ENST00000414879 LCNL1Q6ZST4 164 aa9.6□□□□□ -0.87
PTPRF-205ENST00000414879 PRADC1Q9BSG0 188 aa9.6□□□□□ -0.87
PTPRF-205ENST00000414879 IGKV1-39P01597 117 aa9.6□□□□□ -0.87
PTPRF-205ENST00000414879 IGKV1D-39P04432 117 aa9.6□□□□□ -0.87
PTPRF-205ENST00000414879 PRSS2P07478 247 aa9.6□□□□□ -0.87
PTPRF-205ENST00000414879 LINC00614P0C842 121 aa9.6□□□□□ -0.87
PTPRF-205ENST00000414879 ADORA2A-AS1P86434 159 aa9.6□□□□□ -0.87
PTPRF-205ENST00000414879 HIST1H4GQ99525 98 aa9.6□□□□□ -0.87
PTPRF-205ENST00000414879 TMEM262E9PQX1 116 aa9.59□□□□□ -0.87
PTPRF-205ENST00000414879 ZNF329Q86UD4 541 aa9.59□□□□□ -0.87
PTPRF-205ENST00000414879 DCAF16Q9NXF7 216 aa9.59□□□□□ -0.87
PTPRF-205ENST00000414879 C7orf71A4D174 169 aa9.59□□□□□ -0.87
PTPRF-205ENST00000414879 C5orf24Q7Z6I8 188 aa9.59□□□□□ -0.87
PTPRF-205ENST00000414879 PRORYQ9H606 182 aa9.59□□□□□ -0.87
PTPRF-205ENST00000414879 MRPL27Q9P0M9 148 aaKnown RBP9.59□□□□□ -0.87
PTPRF-205ENST00000414879 PLA2G5P39877 138 aa9.59□□□□□ -0.87
PTPRF-205ENST00000414879 GUSBP1Q15486 140 aa9.59□□□□□ -0.87
PTPRF-205ENST00000414879 MEIG1Q5JSS6 88 aa9.59□□□□□ -0.87
PTPRF-205ENST00000414879 MUC21Q5SSG8 566 aa9.59□□□□□ -0.87
PTPRF-205ENST00000414879 DPH3P1Q9H4G8 78 aa9.59□□□□□ -0.87
PTPRF-205ENST00000414879 PRDM13Q9H4Q3 707 aa9.59□□□□□ -0.87
PTPRF-205ENST00000414879 GTF3C1Q12789 2109 aa9.59□□□□□ -0.87
PTPRF-205ENST00000414879 TRGV4A0A0C4DH28 118 aa9.59□□□□□ -0.87
PTPRF-205ENST00000414879 A0A1B0GUS0 222 aa9.59□□□□□ -0.87
PTPRF-205ENST00000414879 COTL1Q14019 142 aa9.59□□□□□ -0.87
PTPRF-205ENST00000414879 SEM1Q6ZVN7 128 aa9.59□□□□□ -0.87
PTPRF-205ENST00000414879 EXOC3-AS1Q8N2X6 119 aa9.59□□□□□ -0.87
PTPRF-205ENST00000414879 GHRHP01286 108 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 FABP2P12104 132 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 RUSC1-AS1Q66K80 236 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 KLK15Q9H2R5 256 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 VCX2Q9H322 139 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 LIME1Q9H400 295 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 Q86TA4 180 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 ZNF114Q8NC26 417 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 CBY1Q9Y3M2 126 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 C22orf46C9J442 243 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 OVOL3O00110 214 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 ZNF134P52741 427 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 SEC11AP67812 179 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 SRSF3P84103 164 aaKnown RBP9.58□□□□□ -0.88
PTPRF-205ENST00000414879 IL15RAQ13261 267 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 NPBQ8NG41 125 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 KIAA2026Q5HYC2 2103 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 CD33P20138 364 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 DDTP30046 118 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 TCTAP57738 103 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 FBLN7Q53RD9 439 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 TMEM170BQ5T4T1 132 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 CTSZQ9UBR2 303 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 VPREB3Q9UKI3 123 aa9.58□□□□□ -0.88
PTPRF-205ENST00000414879 IGKV2-40A0A087WW87 121 aaPredicted RBP9.57□□□□□ -0.88
PTPRF-205ENST00000414879 RHODO00212 210 aa9.57□□□□□ -0.88
PTPRF-205ENST00000414879 IGKV2D-40P01614 121 aaPredicted RBP9.57□□□□□ -0.88
PTPRF-205ENST00000414879 RNF224P0DH78 156 aa9.57□□□□□ -0.88
PTPRF-205ENST00000414879 LINC00518Q8N0U6 118 aa9.57□□□□□ -0.88
PTPRF-205ENST00000414879 NBASA2RRP1 2371 aa9.57□□□□□ -0.88
PTPRF-205ENST00000414879 SRRM4A7MD48 611 aaKnown RBP9.57□□□□□ -0.88
PTPRF-205ENST00000414879 ZNF688P0C7X2 276 aa9.57□□□□□ -0.88
PTPRF-205ENST00000414879 HOXB4P17483 251 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms