RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 Q6AWC8 147 aa13.2□□□□□ -0.3
LIMS2-208ENST00000410011 PET117Q6UWS5 81 aa13.2□□□□□ -0.3
LIMS2-208ENST00000410011 S100A7AQ86SG5 101 aa13.2□□□□□ -0.3
LIMS2-208ENST00000410011 PRNTQ86SH4 94 aa13.2□□□□□ -0.3
LIMS2-208ENST00000410011 EXOC3-AS1Q8N2X6 119 aa13.2□□□□□ -0.3
LIMS2-208ENST00000410011 CLEC5AQ9NY25 188 aa13.2□□□□□ -0.3
LIMS2-208ENST00000410011 SH3BGRL2Q9UJC5 107 aa13.2□□□□□ -0.3
LIMS2-208ENST00000410011 A0A1B0GUT8 65 aa13.19□□□□□ -0.3
LIMS2-208ENST00000410011 MRPS12O15235 138 aaKnown RBP13.19□□□□□ -0.3
LIMS2-208ENST00000410011 SIGLEC15Q6ZMC9 328 aa13.19□□□□□ -0.3
LIMS2-208ENST00000410011 VKORC1Q9BQB6 163 aa13.19□□□□□ -0.3
LIMS2-208ENST00000410011 ROS1P08922 2347 aa13.19□□□□□ -0.3
LIMS2-208ENST00000410011 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.19□□□□□ -0.3
LIMS2-208ENST00000410011 SIAH2O43255 324 aa13.19□□□□□ -0.3
LIMS2-208ENST00000410011 RIGQ13278 110 aa13.19□□□□□ -0.3
LIMS2-208ENST00000410011 ZNF491Q8N8L2 437 aa13.19□□□□□ -0.3
LIMS2-208ENST00000410011 BOD1L1Q8NFC6 3051 aa13.18□□□□□ -0.3
LIMS2-208ENST00000410011 TRAV30A0A087WSZ9 112 aa13.18□□□□□ -0.3
LIMS2-208ENST00000410011 WI2-2373I1.2A0A1W2PRP0 233 aa13.18□□□□□ -0.3
LIMS2-208ENST00000410011 PDE6HQ13956 83 aa13.18□□□□□ -0.3
LIMS2-208ENST00000410011 PSG3Q16557 428 aa13.18□□□□□ -0.3
LIMS2-208ENST00000410011 NPBQ8NG41 125 aa13.18□□□□□ -0.3
LIMS2-208ENST00000410011 ZNF48Q96MX3 618 aaPredicted RBP13.18□□□□□ -0.3
LIMS2-208ENST00000410011 SH2D7A6NKC9 451 aaPredicted RBP13.18□□□□□ -0.3
LIMS2-208ENST00000410011 NDUFA3O95167 84 aa13.18□□□□□ -0.3
LIMS2-208ENST00000410011 DLX1P56177 255 aa13.18□□□□□ -0.3
LIMS2-208ENST00000410011 PLGLAQ15195 96 aa13.18□□□□□ -0.3
LIMS2-208ENST00000410011 ARL6IP6Q8N6S5 226 aa13.18□□□□□ -0.3
LIMS2-208ENST00000410011 OR11H6Q8NGC7 330 aa13.18□□□□□ -0.3
LIMS2-208ENST00000410011 ZC2HC1AQ96GY0 325 aa13.18□□□□□ -0.3
LIMS2-208ENST00000410011 TMEM191AQ9H0A3 160 aa13.18□□□□□ -0.3
LIMS2-208ENST00000410011 RAB1BQ9H0U4 201 aa13.18□□□□□ -0.3
LIMS2-208ENST00000410011 HSPB8Q9UJY1 196 aa13.18□□□□□ -0.3
LIMS2-208ENST00000410011 COX7A1P24310 79 aa13.17□□□□□ -0.3
LIMS2-208ENST00000410011 RNF125Q96EQ8 232 aa13.17□□□□□ -0.3
LIMS2-208ENST00000410011 PSG8Q9UQ74 426 aa13.17□□□□□ -0.3
LIMS2-208ENST00000410011 SERTM2A0A1B0GWG4 89 aa13.17□□□□□ -0.3
LIMS2-208ENST00000410011 CNIH1O95406 144 aa13.17□□□□□ -0.3
LIMS2-208ENST00000410011 NEU4Q8WWR8 484 aaPredicted RBP13.17□□□□□ -0.3
LIMS2-208ENST00000410011 ZNF414Q96IQ9 312 aa13.17□□□□□ -0.3
LIMS2-208ENST00000410011 MAP1LC3CQ9BXW4 147 aa13.17□□□□□ -0.3
LIMS2-208ENST00000410011 NBR2O15453 112 aa13.16□□□□□ -0.3
LIMS2-208ENST00000410011 CD24P25063 80 aa13.16□□□□□ -0.3
LIMS2-208ENST00000410011 HINT1P49773 126 aaPredicted RBP13.16□□□□□ -0.3
LIMS2-208ENST00000410011 ZNF493Q6ZR52 646 aa13.16□□□□□ -0.3
LIMS2-208ENST00000410011 MS4A6AQ9H2W1 248 aa13.16□□□□□ -0.3
LIMS2-208ENST00000410011 DPM3Q9P2X0 92 aa13.16□□□□□ -0.3
LIMS2-208ENST00000410011 COX11Q9Y6N1 276 aa13.16□□□□□ -0.3
LIMS2-208ENST00000410011 TTC28Q96AY4 2481 aa13.16□□□□□ -0.3
LIMS2-208ENST00000410011 M0QZ24 198 aa13.16□□□□□ -0.3
LIMS2-208ENST00000410011 TIMM23O14925 209 aa13.16□□□□□ -0.3
LIMS2-208ENST00000410011 HLA-DRB1P01911 266 aa13.16□□□□□ -0.3
LIMS2-208ENST00000410011 HTR1DP28221 377 aa13.16□□□□□ -0.3
LIMS2-208ENST00000410011 TCF15Q12870 199 aa13.16□□□□□ -0.3
LIMS2-208ENST00000410011 COX8CQ7Z4L0 72 aa13.16□□□□□ -0.3
LIMS2-208ENST00000410011 ZNF738Q8NE65 137 aa13.16□□□□□ -0.3
LIMS2-208ENST00000410011 CFHR4Q92496 578 aa13.16□□□□□ -0.3
LIMS2-208ENST00000410011 PKDREJQ9NTG1 2253 aa13.15□□□□□ -0.3
LIMS2-208ENST00000410011 FBXL19-AS1Q494R0 122 aa13.15□□□□□ -0.3
LIMS2-208ENST00000410011 LYNX1G3V0Z9 82 aa13.14□□□□□ -0.31
LIMS2-208ENST00000410011 LYNX1P0DP58 116 aa13.14□□□□□ -0.31
LIMS2-208ENST00000410011 LDLRAD2Q5SZI1 272 aa13.14□□□□□ -0.31
LIMS2-208ENST00000410011 LINC00173Q6ZV60 143 aa13.14□□□□□ -0.31
LIMS2-208ENST00000410011 C17orf77Q96MU5 243 aa13.14□□□□□ -0.31
LIMS2-208ENST00000410011 NPIPB5A8MRT5 1133 aa13.14□□□□□ -0.31
LIMS2-208ENST00000410011 CEACAM3P40198 252 aa13.14□□□□□ -0.31
LIMS2-208ENST00000410011 CRIP1P50238 77 aa13.14□□□□□ -0.31
LIMS2-208ENST00000410011 ZNF672Q499Z4 452 aaPredicted RBP13.14□□□□□ -0.31
LIMS2-208ENST00000410011 HSBP1L1C9JCN9 74 aa13.13□□□□□ -0.31
LIMS2-208ENST00000410011 ARMS2P0C7Q2 107 aa13.13□□□□□ -0.31
LIMS2-208ENST00000410011 PRB3Q04118 309 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-208ENST00000410011 RELQ04864 619 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-208ENST00000410011 CEP250Q9BV73 2442 aa13.13□□□□□ -0.31
LIMS2-208ENST00000410011 FBLL1A6NHQ2 334 aaKnown RBP13.13□□□□□ -0.31
LIMS2-208ENST00000410011 IL4P05112 153 aa13.13□□□□□ -0.31
LIMS2-208ENST00000410011 SFTPCP11686 197 aa13.13□□□□□ -0.31
LIMS2-208ENST00000410011 LINC01545Q5VT33 79 aa13.13□□□□□ -0.31
LIMS2-208ENST00000410011 TMUB1Q9BVT8 246 aa13.13□□□□□ -0.31
LIMS2-208ENST00000410011 AP5S1Q9NUS5 200 aa13.13□□□□□ -0.31
LIMS2-208ENST00000410011 M0R1W7 72 aa13.12□□□□□ -0.31
LIMS2-208ENST00000410011 UBE2V1Q13404 147 aa13.12□□□□□ -0.31
LIMS2-208ENST00000410011 SLC25A34Q6PIV7 304 aa13.12□□□□□ -0.31
LIMS2-208ENST00000410011 IGLV11-55A0A075B6I3 123 aa13.12□□□□□ -0.31
LIMS2-208ENST00000410011 FCGR2BP31994 310 aaPredicted RBP13.12□□□□□ -0.31
LIMS2-208ENST00000410011 AAMDCQ9H7C9 122 aa13.12□□□□□ -0.31
LIMS2-208ENST00000410011 SCRT2Q9NQ03 307 aa13.12□□□□□ -0.31
LIMS2-208ENST00000410011 ONECUT1Q9UBC0 465 aa13.12□□□□□ -0.31
LIMS2-208ENST00000410011 SMG1Q96Q15 3661 aaKnown RBP13.12□□□□□ -0.31
LIMS2-208ENST00000410011 MGAQ8IWI9 3026 aa13.11□□□□□ -0.31
LIMS2-208ENST00000410011 ODF3BA8MYP8 253 aa13.11□□□□□ -0.31
LIMS2-208ENST00000410011 MFAP4P55083 255 aa13.11□□□□□ -0.31
LIMS2-208ENST00000410011 PRR31Q5SQ13 230 aa13.11□□□□□ -0.31
LIMS2-208ENST00000410011 ZNF562Q6V9R5 426 aa13.11□□□□□ -0.31
LIMS2-208ENST00000410011 Q71RC1 249 aaPredicted RBP13.11□□□□□ -0.31
LIMS2-208ENST00000410011 IGFBPL1Q8WX77 278 aa13.11□□□□□ -0.31
LIMS2-208ENST00000410011 U3KQK5 164 aa13.11□□□□□ -0.31
LIMS2-208ENST00000410011 DMXL1Q9Y485 3027 aa13.11□□□□□ -0.31
LIMS2-208ENST00000410011 TCF21O43680 179 aa13.11□□□□□ -0.31
LIMS2-208ENST00000410011 CT45A10P0DMU9 189 aa13.11□□□□□ -0.31
LIMS2-208ENST00000410011 CSN1S1P47710 185 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms