RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 RPL23P62829 140 aaKnown RBP7.23□□□□□ -1.25
LIG4-202ENST00000405925 KIAA1644Q3SXP7 199 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 SAMD13Q5VXD3 122 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 IGFL4Q6B9Z1 124 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 VN1R17PQ8TDU5 208 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 WFDC12Q8WWY7 111 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 FMC1Q96HJ9 113 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 FNDC4Q9H6D8 234 aaPredicted RBP7.23□□□□□ -1.25
LIG4-202ENST00000405925 PSG8Q9UQ74 426 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.22□□□□□ -1.25
LIG4-202ENST00000405925 GRIFINA4D1Z8 144 aa7.22□□□□□ -1.25
LIG4-202ENST00000405925 ATRAIDQ6UW56 229 aa7.22□□□□□ -1.25
LIG4-202ENST00000405925 EIF4E3Q8N5X7 224 aaKnown RBP7.22□□□□□ -1.25
LIG4-202ENST00000405925 OR10D4PQ8NGN7 298 aa7.22□□□□□ -1.25
LIG4-202ENST00000405925 NEU1Q99519 415 aa7.22□□□□□ -1.25
LIG4-202ENST00000405925 ADAMTS20P59510 1910 aa7.22□□□□□ -1.25
LIG4-202ENST00000405925 NPIPB5A8MRT5 1133 aa7.22□□□□□ -1.25
LIG4-202ENST00000405925 C9JCJ5 164 aa7.22□□□□□ -1.25
LIG4-202ENST00000405925 IGLV2-14P01704 120 aa7.22□□□□□ -1.25
LIG4-202ENST00000405925 CD99P14209 185 aa7.22□□□□□ -1.25
LIG4-202ENST00000405925 RRN3P1Q2M238 152 aa7.22□□□□□ -1.25
LIG4-202ENST00000405925 FAM74A4Q5TZK3 123 aa7.22□□□□□ -1.25
LIG4-202ENST00000405925 WFDC11Q8NEX6 87 aa7.22□□□□□ -1.25
LIG4-202ENST00000405925 RNASE7Q9H1E1 156 aaKnown RBP7.22□□□□□ -1.25
LIG4-202ENST00000405925 OR4C46A6NHA9 309 aa7.22□□□□□ -1.25
LIG4-202ENST00000405925 MT-ND6P03923 174 aa7.22□□□□□ -1.25
LIG4-202ENST00000405925 DGAT2L7PQ6IED9 249 aa7.22□□□□□ -1.25
LIG4-202ENST00000405925 TOMM20LQ6UXN7 152 aa7.22□□□□□ -1.25
LIG4-202ENST00000405925 DAZ1Q9NQZ3 744 aaKnown RBP7.22□□□□□ -1.25
LIG4-202ENST00000405925 IGKV2-40A0A087WW87 121 aaPredicted RBP7.22□□□□□ -1.25
LIG4-202ENST00000405925 IGHV7-81A0A0B4J1V7 117 aa7.22□□□□□ -1.25
LIG4-202ENST00000405925 M0R381 172 aa7.22□□□□□ -1.25
LIG4-202ENST00000405925 IGKV2D-40P01614 121 aaPredicted RBP7.22□□□□□ -1.25
LIG4-202ENST00000405925 CIARTQ8N365 385 aaPredicted RBP7.22□□□□□ -1.25
LIG4-202ENST00000405925 KLHDC1Q8N7A1 406 aa7.22□□□□□ -1.25
LIG4-202ENST00000405925 AP1S3Q96PC3 154 aa7.22□□□□□ -1.25
LIG4-202ENST00000405925 HLA-DQA1P01909 254 aa7.21□□□□□ -1.25
LIG4-202ENST00000405925 OCC1Q8TAD7 63 aa7.21□□□□□ -1.25
LIG4-202ENST00000405925 DERL1Q9BUN8 251 aa7.21□□□□□ -1.25
LIG4-202ENST00000405925 PARD6GQ9BYG4 376 aaPredicted RBP7.21□□□□□ -1.25
LIG4-202ENST00000405925 A0A087X0M5 115 aa7.21□□□□□ -1.26
LIG4-202ENST00000405925 TRAV8-1A0A0A6YYK1 113 aa7.21□□□□□ -1.26
LIG4-202ENST00000405925 LOC389332A0A1B0GUA5 103 aa7.21□□□□□ -1.26
LIG4-202ENST00000405925 A0A1B0GX30 115 aa7.21□□□□□ -1.26
LIG4-202ENST00000405925 CXorf65A6NEN9 183 aa7.21□□□□□ -1.26
LIG4-202ENST00000405925 CKS2P33552 79 aa7.21□□□□□ -1.26
LIG4-202ENST00000405925 RNASE4P34096 147 aaKnown RBP7.21□□□□□ -1.26
LIG4-202ENST00000405925 SYT8Q8NBV8 401 aa7.21□□□□□ -1.26
LIG4-202ENST00000405925 CDC42EP3Q9UKI2 254 aa7.21□□□□□ -1.26
LIG4-202ENST00000405925 HECTD1Q9ULT8 2610 aa7.21□□□□□ -1.26
LIG4-202ENST00000405925 IGLC1P0CG04 106 aa7.21□□□□□ -1.26
LIG4-202ENST00000405925 YPEL3P61236 119 aaPredicted RBP7.21□□□□□ -1.26
LIG4-202ENST00000405925 C3orf56Q8N813 242 aa7.21□□□□□ -1.26
LIG4-202ENST00000405925 Q8N9W7 124 aa7.21□□□□□ -1.26
LIG4-202ENST00000405925 SHANK2-AS3Q9BTD1 123 aa7.21□□□□□ -1.26
LIG4-202ENST00000405925 PTPRBP23467 1997 aa7.2□□□□□ -1.26
LIG4-202ENST00000405925 C2CD3Q4AC94 2353 aa7.2□□□□□ -1.26
LIG4-202ENST00000405925 A0A1W2PPR1 153 aa7.2□□□□□ -1.26
LIG4-202ENST00000405925 CD5P06127 495 aa7.2□□□□□ -1.26
LIG4-202ENST00000405925 CBLN1P23435 193 aa7.2□□□□□ -1.26
LIG4-202ENST00000405925 LOXL1Q08397 574 aaPredicted RBP7.2□□□□□ -1.26
LIG4-202ENST00000405925 FBLN7Q53RD9 439 aa7.2□□□□□ -1.26
LIG4-202ENST00000405925 ZNF705AQ6ZN79 300 aaPredicted RBP7.2□□□□□ -1.26
LIG4-202ENST00000405925 STHQ8IWL8 128 aa7.2□□□□□ -1.26
LIG4-202ENST00000405925 ST6GALNAC6Q969X2 333 aa7.2□□□□□ -1.26
LIG4-202ENST00000405925 LY6G5BQ8NDX9 201 aa7.2□□□□□ -1.26
LIG4-202ENST00000405925 HSPB9Q9BQS6 159 aa7.2□□□□□ -1.26
LIG4-202ENST00000405925 RNF114Q9Y508 228 aa7.2□□□□□ -1.26
LIG4-202ENST00000405925 YTHDF2Q9Y5A9 579 aaKnown RBP7.2□□□□□ -1.26
LIG4-202ENST00000405925 SORL1Q92673 2214 aa7.2□□□□□ -1.26
LIG4-202ENST00000405925 FABP5P3A8MUU1 101 aa7.2□□□□□ -1.26
LIG4-202ENST00000405925 M0R2Z0 102 aa7.2□□□□□ -1.26
LIG4-202ENST00000405925 TCRAP04437 139 aa7.2□□□□□ -1.26
LIG4-202ENST00000405925 OR5AL1P0C617 328 aa7.2□□□□□ -1.26
LIG4-202ENST00000405925 PLA2G2AP14555 144 aa7.2□□□□□ -1.26
LIG4-202ENST00000405925 C9orf139Q6ZV77 190 aa7.2□□□□□ -1.26
LIG4-202ENST00000405925 BCL6BQ8N143 479 aaPredicted RBP7.2□□□□□ -1.26
LIG4-202ENST00000405925 Q8TAT8 98 aa7.2□□□□□ -1.26
LIG4-202ENST00000405925 DUX3Q96PT4 197 aa7.2□□□□□ -1.26
LIG4-202ENST00000405925 MRPL18Q9H0U6 180 aaKnown RBP7.2□□□□□ -1.26
LIG4-202ENST00000405925 RPP21Q9H633 154 aaKnown RBP7.2□□□□□ -1.26
LIG4-202ENST00000405925 ARL2-SNX15V9GYD0 113 aa7.2□□□□□ -1.26
LIG4-202ENST00000405925 C11orf42Q8N5U0 333 aa7.19□□□□□ -1.26
LIG4-202ENST00000405925 PHOX2AO14813 284 aa7.19□□□□□ -1.26
LIG4-202ENST00000405925 TCF21O43680 179 aa7.19□□□□□ -1.26
LIG4-202ENST00000405925 FCN3O75636 299 aa7.19□□□□□ -1.26
LIG4-202ENST00000405925 ASIPP42127 132 aa7.19□□□□□ -1.26
LIG4-202ENST00000405925 LINC01587Q99440 93 aa7.19□□□□□ -1.26
LIG4-202ENST00000405925 IL36BQ9NZH7 164 aa7.19□□□□□ -1.26
LIG4-202ENST00000405925 FBLL1A6NHQ2 334 aaKnown RBP7.19□□□□□ -1.26
LIG4-202ENST00000405925 DUSP14O95147 198 aaKnown RBP7.19□□□□□ -1.26
LIG4-202ENST00000405925 CA1P00915 261 aaPredicted RBP7.19□□□□□ -1.26
LIG4-202ENST00000405925 PRSS1P07477 247 aa7.19□□□□□ -1.26
LIG4-202ENST00000405925 FCER1GP30273 86 aa7.19□□□□□ -1.26
LIG4-202ENST00000405925 FOXA3P55318 350 aaPredicted RBP7.19□□□□□ -1.26
LIG4-202ENST00000405925 NPBQ8NG41 125 aa7.19□□□□□ -1.26
LIG4-202ENST00000405925 LINC00574Q9H8X3 128 aa7.19□□□□□ -1.26
LIG4-202ENST00000405925 ZFP30Q9Y2G7 519 aa7.19□□□□□ -1.26
LIG4-202ENST00000405925 CBY3A6NI87 242 aa7.18□□□□□ -1.26
LIG4-202ENST00000405925 TRGC1P0CF51 173 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms