RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 RPL11P62913 178 aaKnown RBP25.08■■□□□ 1.61
CSNK1E-204ENST00000403904 FAM90A2PQ658T7 463 aa25.08■■□□□ 1.61
CSNK1E-204ENST00000403904 MIR17HGQ75NE6 70 aa25.08■■□□□ 1.61
CSNK1E-204ENST00000403904 IGKV3-7A0A075B6H7 116 aa25.07■■□□□ 1.6
CSNK1E-204ENST00000403904 MBP02144 154 aa25.07■■□□□ 1.6
CSNK1E-204ENST00000403904 RBPMS2Q6ZRY4 209 aaKnown RBP25.07■■□□□ 1.6
CSNK1E-204ENST00000403904 RPRMQ9NS64 109 aa25.07■■□□□ 1.6
CSNK1E-204ENST00000403904 PLA2G2EQ9NZK7 142 aa25.07■■□□□ 1.6
CSNK1E-204ENST00000403904 TMEM41BQ5BJD5 291 aa25.06■■□□□ 1.6
CSNK1E-204ENST00000403904 AKR1C8PQ5T2L2 129 aa25.06■■□□□ 1.6
CSNK1E-204ENST00000403904 FAM122CQ6P4D5 195 aa25.06■■□□□ 1.6
CSNK1E-204ENST00000403904 SIGLEC15Q6ZMC9 328 aa25.06■■□□□ 1.6
CSNK1E-204ENST00000403904 RPP25LQ8N5L8 163 aaKnown RBP25.06■■□□□ 1.6
CSNK1E-204ENST00000403904 FUT9Q9Y231 359 aa25.06■■□□□ 1.6
CSNK1E-204ENST00000403904 EIF3GO75821 320 aaKnown RBP eCLIP25.05■■□□□ 1.6
CSNK1E-204ENST00000403904 RHOBP62745 196 aa25.05■■□□□ 1.6
CSNK1E-204ENST00000403904 MRPL32Q9BYC8 188 aaKnown RBP25.05■■□□□ 1.6
CSNK1E-204ENST00000403904 OR2K2Q8NGT1 345 aa25.05■■□□□ 1.6
CSNK1E-204ENST00000403904 HELTA6NFD8 242 aa25.04■■□□□ 1.6
CSNK1E-204ENST00000403904 SAMD5Q5TGI4 173 aa25.04■■□□□ 1.6
CSNK1E-204ENST00000403904 RNF24Q9Y225 148 aa25.04■■□□□ 1.6
CSNK1E-204ENST00000403904 A0A1W2PPV4 95 aa25.03■■□□□ 1.6
CSNK1E-204ENST00000403904 CD5P06127 495 aa25.03■■□□□ 1.6
CSNK1E-204ENST00000403904 LCN12Q6JVE5 192 aa25.03■■□□□ 1.6
CSNK1E-204ENST00000403904 GBGT1Q8N5D6 347 aa25.03■■□□□ 1.6
CSNK1E-204ENST00000403904 SMAD5-AS1Q9Y6J3 95 aa25.02■■□□□ 1.6
CSNK1E-204ENST00000403904 TRAV25A0A0B4J276 109 aa25.01■■□□□ 1.59
CSNK1E-204ENST00000403904 TSPAN4O14817 238 aa25.01■■□□□ 1.59
CSNK1E-204ENST00000403904 RPL7P18124 248 aaKnown RBP25.01■■□□□ 1.59
CSNK1E-204ENST00000403904 EIF5AL1Q6IS14 154 aaKnown RBP25.01■■□□□ 1.59
CSNK1E-204ENST00000403904 GPR82Q96P67 336 aa25.01■■□□□ 1.59
CSNK1E-204ENST00000403904 SLC25A2Q9BXI2 301 aa25.01■■□□□ 1.59
CSNK1E-204ENST00000403904 SORL1Q92673 2214 aa25.01■■□□□ 1.59
CSNK1E-204ENST00000403904 CDC34P49427 236 aaPredicted RBP25.01■■□□□ 1.59
CSNK1E-204ENST00000403904 GUCA2BQ16661 112 aa25.01■■□□□ 1.59
CSNK1E-204ENST00000403904 BPIFA4PQ86YQ2 179 aa25.01■■□□□ 1.59
CSNK1E-204ENST00000403904 FAM167A-AS1Q96KT0 104 aa25.01■■□□□ 1.59
CSNK1E-204ENST00000403904 ZNF785A8K8V0 405 aa25■■□□□ 1.59
CSNK1E-204ENST00000403904 GALR1P47211 349 aa25■■□□□ 1.59
CSNK1E-204ENST00000403904 STXBP6Q8NFX7 210 aa25■■□□□ 1.59
CSNK1E-204ENST00000403904 MS4A6AQ9H2W1 248 aa25■■□□□ 1.59
CSNK1E-204ENST00000403904 MRPS12O15235 138 aaKnown RBP24.99■■□□□ 1.59
CSNK1E-204ENST00000403904 HMGB3O15347 200 aaKnown RBP24.99■■□□□ 1.59
CSNK1E-204ENST00000403904 TFPI2P48307 235 aa24.99■■□□□ 1.59
CSNK1E-204ENST00000403904 UMAD1C9J7I0 102 aa24.98■■□□□ 1.59
CSNK1E-204ENST00000403904 SNRPCP09234 159 aaKnown RBP24.98■■□□□ 1.59
CSNK1E-204ENST00000403904 FHITP49789 147 aa24.98■■□□□ 1.59
CSNK1E-204ENST00000403904 WFDC3Q8IUB2 231 aa24.98■■□□□ 1.59
CSNK1E-204ENST00000403904 RAB24Q969Q5 203 aa24.98■■□□□ 1.59
CSNK1E-204ENST00000403904 ACTR3CQ9C0K3 210 aaPredicted RBP24.98■■□□□ 1.59
CSNK1E-204ENST00000403904 NBEAL1Q6ZS30 2694 aa24.98■■□□□ 1.59
CSNK1E-204ENST00000403904 SSX7Q7RTT5 188 aa24.97■■□□□ 1.59
CSNK1E-204ENST00000403904 NOTCH1P46531 2555 aa24.97■■□□□ 1.59
CSNK1E-204ENST00000403904 PYYP10082 97 aa24.97■■□□□ 1.59
CSNK1E-204ENST00000403904 ZNF726P1Q15940 193 aa24.97■■□□□ 1.59
CSNK1E-204ENST00000403904 C17orf77Q96MU5 243 aa24.97■■□□□ 1.59
CSNK1E-204ENST00000403904 SPAG8Q99932 426 aaPredicted RBP24.97■■□□□ 1.59
CSNK1E-204ENST00000403904 NRN1Q9NPD7 142 aa24.97■■□□□ 1.59
CSNK1E-204ENST00000403904 DNASE2O00115 360 aaPredicted RBP24.96■■□□□ 1.59
CSNK1E-204ENST00000403904 GP9P14770 177 aa24.96■■□□□ 1.59
CSNK1E-204ENST00000403904 ATF4P18848 351 aaPredicted RBP24.96■■□□□ 1.59
CSNK1E-204ENST00000403904 TAS2R45P59539 299 aa24.96■■□□□ 1.59
CSNK1E-204ENST00000403904 KRTAP10-11P60412 298 aa24.96■■□□□ 1.59
CSNK1E-204ENST00000403904 PAFAH1B2P68402 229 aa24.96■■□□□ 1.59
CSNK1E-204ENST00000403904 EGFEM1PQ0D2K5 195 aa24.96■■□□□ 1.59
CSNK1E-204ENST00000403904 ALKAL2Q6UX46 152 aa24.96■■□□□ 1.59
CSNK1E-204ENST00000403904 OR7C2O60412 319 aa24.95■■□□□ 1.58
CSNK1E-204ENST00000403904 KHDC3LQ587J8 217 aa24.94■■□□□ 1.58
CSNK1E-204ENST00000403904 FAM74A1Q5RGS3 127 aa24.94■■□□□ 1.58
CSNK1E-204ENST00000403904 ZNF503Q96F45 646 aa24.94■■□□□ 1.58
CSNK1E-204ENST00000403904 PHYHIPLQ96FC7 376 aa24.94■■□□□ 1.58
CSNK1E-204ENST00000403904 OR51M1Q9H341 326 aa24.94■■□□□ 1.58
CSNK1E-204ENST00000403904 TMEM14CQ9P0S9 112 aa24.94■■□□□ 1.58
CSNK1E-204ENST00000403904 ZNF256Q9Y2P7 627 aaPredicted RBP24.94■■□□□ 1.58
CSNK1E-204ENST00000403904 FAM213BQ8TBF2 198 aa24.93■■□□□ 1.58
CSNK1E-204ENST00000403904 DCANP1Q8TF63 244 aa24.93■■□□□ 1.58
CSNK1E-204ENST00000403904 H3BQ15 152 aa24.93■■□□□ 1.58
CSNK1E-204ENST00000403904 IGLC2P0DOY2 106 aa24.93■■□□□ 1.58
CSNK1E-204ENST00000403904 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa24.93■■□□□ 1.58
CSNK1E-204ENST00000403904 PAXXQ9BUH6 204 aa24.93■■□□□ 1.58
CSNK1E-204ENST00000403904 CTXND1A0A1B0GTU2 59 aa24.92■■□□□ 1.58
CSNK1E-204ENST00000403904 H3BTX0 84 aa24.92■■□□□ 1.58
CSNK1E-204ENST00000403904 OR10J4P0C629 311 aa24.92■■□□□ 1.58
CSNK1E-204ENST00000403904 STAG3L2P0CL84 134 aa24.92■■□□□ 1.58
CSNK1E-204ENST00000403904 STAG3L3P0CL85 134 aa24.92■■□□□ 1.58
CSNK1E-204ENST00000403904 SULT1A2P50226 295 aa24.92■■□□□ 1.58
CSNK1E-204ENST00000403904 DNAH3Q8TD57 4116 aa24.91■■□□□ 1.58
CSNK1E-204ENST00000403904 HRH4Q9H3N8 390 aa24.91■■□□□ 1.58
CSNK1E-204ENST00000403904 A0A087X0K7 114 aa24.9■■□□□ 1.58
CSNK1E-204ENST00000403904 OR4C46A6NHA9 309 aa24.9■■□□□ 1.58
CSNK1E-204ENST00000403904 BEAN1Q3B7T3 259 aa24.9■■□□□ 1.58
CSNK1E-204ENST00000403904 RNF141Q8WVD5 230 aa24.9■■□□□ 1.58
CSNK1E-204ENST00000403904 ZNF586Q9NXT0 402 aa24.9■■□□□ 1.58
CSNK1E-204ENST00000403904 K7EQG2 157 aa24.89■■□□□ 1.58
CSNK1E-204ENST00000403904 ARL14EPLP0DKL9 152 aa24.89■■□□□ 1.58
CSNK1E-204ENST00000403904 RAB5CP51148 216 aa24.89■■□□□ 1.58
CSNK1E-204ENST00000403904 LCN15Q6UWW0 184 aa24.89■■□□□ 1.58
CSNK1E-204ENST00000403904 DPPA3Q6W0C5 159 aa24.89■■□□□ 1.58
CSNK1E-204ENST00000403904 PQLC2Q6ZP29 291 aa24.89■■□□□ 1.58
CSNK1E-204ENST00000403904 FAM24BQ8N5W8 94 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms