RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 CCL25O15444 150 aa15.79■□□□□ 0.12
CCDC47-202ENST00000403162 RPL27AP46776 148 aaKnown RBP15.79■□□□□ 0.12
CCDC47-202ENST00000403162 UNQ5815/PRO19632Q6UWF5 114 aa15.79■□□□□ 0.12
CCDC47-202ENST00000403162 ZNF738Q8NE65 137 aa15.79■□□□□ 0.12
CCDC47-202ENST00000403162 DAZAP1Q96EP5 407 aaKnown RBP15.79■□□□□ 0.12
CCDC47-202ENST00000403162 NDFIP1Q9BT67 221 aa15.79■□□□□ 0.12
CCDC47-202ENST00000403162 SH2D7A6NKC9 451 aaPredicted RBP15.79■□□□□ 0.12
CCDC47-202ENST00000403162 SYS1-DBNDD2H3BUS1 97 aa15.79■□□□□ 0.12
CCDC47-202ENST00000403162 FOXA3P55318 350 aaPredicted RBP15.79■□□□□ 0.12
CCDC47-202ENST00000403162 BSPH1Q075Z2 132 aa15.79■□□□□ 0.12
CCDC47-202ENST00000403162 TMEM155Q4W5P6 130 aa15.79■□□□□ 0.12
CCDC47-202ENST00000403162 LHFPL4Q7Z7J7 247 aa15.79■□□□□ 0.12
CCDC47-202ENST00000403162 CTSZQ9UBR2 303 aa15.79■□□□□ 0.12
CCDC47-202ENST00000403162 ADGRG4Q8IZF6 3080 aa15.78■□□□□ 0.12
CCDC47-202ENST00000403162 PTTG1IPP53801 180 aa15.78■□□□□ 0.12
CCDC47-202ENST00000403162 OTORQ9NRC9 128 aa15.78■□□□□ 0.12
CCDC47-202ENST00000403162 LOC102724200A0A096LPH7 203 aaPredicted RBP15.77■□□□□ 0.12
CCDC47-202ENST00000403162 ENSAO43768 121 aaKnown RBP15.77■□□□□ 0.12
CCDC47-202ENST00000403162 CRYGBP07316 175 aa15.77■□□□□ 0.12
CCDC47-202ENST00000403162 IGHV1-8P0DP01 117 aa15.77■□□□□ 0.12
CCDC47-202ENST00000403162 UBE2V1Q13404 147 aa15.77■□□□□ 0.12
CCDC47-202ENST00000403162 Q86TA4 180 aa15.77■□□□□ 0.12
CCDC47-202ENST00000403162 M0QZ24 198 aa15.77■□□□□ 0.11
CCDC47-202ENST00000403162 LEPROTL1O95214 131 aa15.77■□□□□ 0.11
CCDC47-202ENST00000403162 CCL17Q92583 94 aa15.77■□□□□ 0.11
CCDC47-202ENST00000403162 KAAG1Q9UBP8 84 aa15.77■□□□□ 0.11
CCDC47-202ENST00000403162 HIGD1AQ9Y241 93 aa15.77■□□□□ 0.11
CCDC47-202ENST00000403162 ZNF462Q96JM2 2506 aa15.77■□□□□ 0.11
CCDC47-202ENST00000403162 PLXNB1O43157 2135 aa15.76■□□□□ 0.11
CCDC47-202ENST00000403162 OR5AL1P0C617 328 aa15.76■□□□□ 0.11
CCDC47-202ENST00000403162 PRR31Q5SQ13 230 aa15.76■□□□□ 0.11
CCDC47-202ENST00000403162 LEMD1Q68G75 181 aa15.76■□□□□ 0.11
CCDC47-202ENST00000403162 C16orf54Q6UWD8 224 aa15.76■□□□□ 0.11
CCDC47-202ENST00000403162 TMEM14CQ9P0S9 112 aa15.76■□□□□ 0.11
CCDC47-202ENST00000403162 HAX1O00165 279 aa15.76■□□□□ 0.11
CCDC47-202ENST00000403162 HOXB4P17483 251 aaPredicted RBP15.76■□□□□ 0.11
CCDC47-202ENST00000403162 CD24P25063 80 aa15.76■□□□□ 0.11
CCDC47-202ENST00000403162 IGHV3-72A0A0B4J1Y9 119 aa15.75■□□□□ 0.11
CCDC47-202ENST00000403162 CHEK1O14757 476 aa15.75■□□□□ 0.11
CCDC47-202ENST00000403162 APOHP02749 345 aaPredicted RBP15.75■□□□□ 0.11
CCDC47-202ENST00000403162 LINC00173Q6ZV60 143 aa15.75■□□□□ 0.11
CCDC47-202ENST00000403162 TMEM190Q8WZ59 177 aa15.75■□□□□ 0.11
CCDC47-202ENST00000403162 TMEM133Q9H2Q1 129 aa15.75■□□□□ 0.11
CCDC47-202ENST00000403162 F11RQ9Y624 299 aaKnown RBP15.75■□□□□ 0.11
CCDC47-202ENST00000403162 TRBV6-1A0A0K0K1D8 114 aa15.75■□□□□ 0.11
CCDC47-202ENST00000403162 H3BTX0 84 aa15.75■□□□□ 0.11
CCDC47-202ENST00000403162 LIPFP07098 398 aa15.75■□□□□ 0.11
CCDC47-202ENST00000403162 COL8A1P27658 744 aa15.75■□□□□ 0.11
CCDC47-202ENST00000403162 TNFRSF14Q92956 283 aa15.75■□□□□ 0.11
CCDC47-202ENST00000403162 SIGLEC9Q9Y336 463 aa15.75■□□□□ 0.11
CCDC47-202ENST00000403162 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.74■□□□□ 0.11
CCDC47-202ENST00000403162 IGLV2-11P01706 119 aa15.74■□□□□ 0.11
CCDC47-202ENST00000403162 Q6ZVH6 145 aa15.74■□□□□ 0.11
CCDC47-202ENST00000403162 TMEM191AQ9H0A3 160 aa15.74■□□□□ 0.11
CCDC47-202ENST00000403162 IGHV3-21A0A0B4J1V1 117 aa15.73■□□□□ 0.11
CCDC47-202ENST00000403162 TEX22C9J3V5 150 aa15.73■□□□□ 0.11
CCDC47-202ENST00000403162 IGLC1P0CG04 106 aa15.73■□□□□ 0.11
CCDC47-202ENST00000403162 CNTFRP26992 372 aa15.73■□□□□ 0.11
CCDC47-202ENST00000403162 SLC25A39Q9BZJ4 359 aaPredicted RBP15.73■□□□□ 0.11
CCDC47-202ENST00000403162 OVOL3O00110 214 aa15.72■□□□□ 0.11
CCDC47-202ENST00000403162 CD3EP07766 207 aa15.72■□□□□ 0.11
CCDC47-202ENST00000403162 PSG1P11464 419 aa15.72■□□□□ 0.11
CCDC47-202ENST00000403162 PET117Q6UWS5 81 aa15.72■□□□□ 0.11
CCDC47-202ENST00000403162 CIARTQ8N365 385 aaPredicted RBP15.72■□□□□ 0.11
CCDC47-202ENST00000403162 GSX1Q9H4S2 264 aaPredicted RBP15.72■□□□□ 0.11
CCDC47-202ENST00000403162 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.72■□□□□ 0.11
CCDC47-202ENST00000403162 TRAV8-1A0A0A6YYK1 113 aa15.72■□□□□ 0.11
CCDC47-202ENST00000403162 APELAP0DMC3 54 aa15.72■□□□□ 0.11
CCDC47-202ENST00000403162 LYZP61626 148 aa15.72■□□□□ 0.11
CCDC47-202ENST00000403162 SPTBN1Q01082 2364 aaKnown RBP15.72■□□□□ 0.11
CCDC47-202ENST00000403162 IGHV2-70DA0A0C4DH43 119 aa15.71■□□□□ 0.11
CCDC47-202ENST00000403162 C19orf84I3L1E1 186 aa15.71■□□□□ 0.11
CCDC47-202ENST00000403162 MAP1LC3CQ9BXW4 147 aa15.71■□□□□ 0.11
CCDC47-202ENST00000403162 FAM208BQ5VWN6 2430 aa15.71■□□□□ 0.1
CCDC47-202ENST00000403162 hDV102S1A0JD36 115 aa15.7■□□□□ 0.1
CCDC47-202ENST00000403162 K7EP13 123 aa15.7■□□□□ 0.1
CCDC47-202ENST00000403162 SLC25A34Q6PIV7 304 aa15.7■□□□□ 0.1
CCDC47-202ENST00000403162 GOLT1AQ6ZVE7 132 aa15.7■□□□□ 0.1
CCDC47-202ENST00000403162 PRNTQ86SH4 94 aa15.7■□□□□ 0.1
CCDC47-202ENST00000403162 PPP1R27Q86WC6 154 aa15.7■□□□□ 0.1
CCDC47-202ENST00000403162 GATD1Q8NB37 220 aa15.7■□□□□ 0.1
CCDC47-202ENST00000403162 SHISA9B4DS77 424 aa15.7■□□□□ 0.1
CCDC47-202ENST00000403162 IGLV1-47P01700 117 aa15.7■□□□□ 0.1
CCDC47-202ENST00000403162 FBLN7Q53RD9 439 aa15.7■□□□□ 0.1
CCDC47-202ENST00000403162 HSPB8Q9UJY1 196 aa15.7■□□□□ 0.1
CCDC47-202ENST00000403162 CHD6Q8TD26 2715 aa15.69■□□□□ 0.1
CCDC47-202ENST00000403162 VSTM5A8MXK1 200 aa15.69■□□□□ 0.1
CCDC47-202ENST00000403162 HSBP1L1C9JCN9 74 aa15.69■□□□□ 0.1
CCDC47-202ENST00000403162 MPV17L2Q567V2 206 aa15.69■□□□□ 0.1
CCDC47-202ENST00000403162 EXOC3-AS1Q8N2X6 119 aa15.69■□□□□ 0.1
CCDC47-202ENST00000403162 IGHV1-3A0A0C4DH29 117 aa15.69■□□□□ 0.1
CCDC47-202ENST00000403162 A0A1B0GUT8 65 aa15.69■□□□□ 0.1
CCDC47-202ENST00000403162 I3L2K1 104 aa15.69■□□□□ 0.1
CCDC47-202ENST00000403162 TMEM75Q8N9X5 138 aa15.69■□□□□ 0.1
CCDC47-202ENST00000403162 MS4A6AQ9H2W1 248 aa15.69■□□□□ 0.1
CCDC47-202ENST00000403162 SCRT2Q9NQ03 307 aa15.69■□□□□ 0.1
CCDC47-202ENST00000403162 ANKHD1Q8IWZ3 2542 aaKnown RBP15.69■□□□□ 0.1
CCDC47-202ENST00000403162 ZNF785A8K8V0 405 aa15.68■□□□□ 0.1
CCDC47-202ENST00000403162 HLA-DRB1P01911 266 aa15.68■□□□□ 0.1
CCDC47-202ENST00000403162 HTR1DP28221 377 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms