RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 TBL1YQ9BQ87 522 aa5.01□□□□□ -1.61
SMCO1-201ENST00000397537 TMEM70Q9BUB7 260 aa5.01□□□□□ -1.61
SMCO1-201ENST00000397537 EIF5A2Q9GZV4 153 aaKnown RBP5.01□□□□□ -1.61
SMCO1-201ENST00000397537 PBOV1Q9GZY1 135 aa5.01□□□□□ -1.61
SMCO1-201ENST00000397537 Q9H3A6 140 aa5.01□□□□□ -1.61
SMCO1-201ENST00000397537 SLC25A22Q9H936 323 aa5.01□□□□□ -1.61
SMCO1-201ENST00000397537 ZNF443Q9Y2A4 671 aaPredicted RBP5.01□□□□□ -1.61
SMCO1-201ENST00000397537 ZFHX3Q15911 3703 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 DOCK5Q9H7D0 1870 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 ODAMA1E959 279 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 RIIAD1A6NNX1 92 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 CD300LBA8K4G0 201 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 HYPMO75409 117 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 IGLV2-8P01709 118 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 SEC11BP0C7V7 166 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 LINC00032P0C843 101 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 ZNF728P0DKX0 622 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 CD52P31358 61 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 KLRD1Q13241 179 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 SPATA45Q537H7 98 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 AADACL3Q5VUY0 350 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 C9orf57Q5W0N0 161 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 ZDHHC22Q8N966 263 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 OR2M3Q8NG83 312 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 IGF2BP2-AS1Q96M15 143 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 GGTLC1Q9BX51 225 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 SLC35B3Q9H1N7 401 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 NPVFQ9HCQ7 196 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 NDUFB11Q9NX14 153 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 IER3IP1Q9Y5U9 82 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 ZNF706Q9Y5V0 76 aaPredicted RBP5□□□□□ -1.61
SMCO1-201ENST00000397537 NCKAP5O14513 1909 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 CHD3Q12873 2000 aaKnown RBP5□□□□□ -1.61
SMCO1-201ENST00000397537 ATG2BQ96BY7 2078 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 PCNX1Q96RV3 2341 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 TMEM212A6NML5 194 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 H0YJW9 148 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 GNGT2O14610 69 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 COX7A2P2O60397 106 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 YPEL1O60688 119 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 LINC00694P0DN24 101 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 ZNF93P35789 620 aaPredicted RBP5□□□□□ -1.61
SMCO1-201ENST00000397537 SRP14P37108 136 aaKnown RBP5□□□□□ -1.61
SMCO1-201ENST00000397537 DIO3P55073 304 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 KIAA0040Q15053 153 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 HRCT1Q6UXD1 115 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 TMEM91Q6ZNR0 172 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 COMMD6Q7Z4G1 85 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 MARCH3Q86UD3 253 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 ZNF584Q8IVC4 421 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 C1orf174Q8IYL3 243 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 ZNF709Q8N972 641 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 OR51H1Q8NH63 302 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 NEUROG1Q92886 237 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 ADAT3Q96EY9 351 aaPredicted RBP5□□□□□ -1.61
SMCO1-201ENST00000397537 YPEL2Q96QA6 119 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 PAXXQ9BUH6 204 aa5□□□□□ -1.61
SMCO1-201ENST00000397537 NOP16Q9Y3C1 178 aaKnown RBP5□□□□□ -1.61
SMCO1-201ENST00000397537 KRTAP4-16G5E9R7 235 aaPredicted RBP4.99□□□□□ -1.61
SMCO1-201ENST00000397537 APOC4-APOC2K7ER74 178 aa4.99□□□□□ -1.61
SMCO1-201ENST00000397537 PEX7O00628 323 aa4.99□□□□□ -1.61
SMCO1-201ENST00000397537 RER1O15258 196 aa4.99□□□□□ -1.61
SMCO1-201ENST00000397537 ZNF253O75346 499 aa4.99□□□□□ -1.61
SMCO1-201ENST00000397537 SFT2D2O95562 160 aa4.99□□□□□ -1.61
SMCO1-201ENST00000397537 CXCL1P09341 107 aa4.99□□□□□ -1.61
SMCO1-201ENST00000397537 PIPP12273 146 aaPredicted RBP4.99□□□□□ -1.61
SMCO1-201ENST00000397537 RPS4Y1P22090 263 aaKnown RBP4.99□□□□□ -1.61
SMCO1-201ENST00000397537 PPIBP23284 216 aaKnown RBP4.99□□□□□ -1.61
SMCO1-201ENST00000397537 HES3Q5TGS1 186 aa4.99□□□□□ -1.61
SMCO1-201ENST00000397537 ITLN1Q8WWA0 313 aa4.99□□□□□ -1.61
SMCO1-201ENST00000397537 CARD19Q96LW7 228 aa4.99□□□□□ -1.61
SMCO1-201ENST00000397537 OR4C12Q96R67 309 aa4.99□□□□□ -1.61
SMCO1-201ENST00000397537 NAA38Q9BRA0 125 aaKnown RBP4.99□□□□□ -1.61
SMCO1-201ENST00000397537 JPT2Q9H910 190 aa4.99□□□□□ -1.61
SMCO1-201ENST00000397537 RPRMQ9NS64 109 aa4.99□□□□□ -1.61
SMCO1-201ENST00000397537 AK3Q9UIJ7 227 aa4.99□□□□□ -1.61
SMCO1-201ENST00000397537 CITO14578 2027 aa4.98□□□□□ -1.61
SMCO1-201ENST00000397537 CENPEQ02224 2701 aa4.98□□□□□ -1.61
SMCO1-201ENST00000397537 IGKV6D-21A0A0A0MT36 114 aa4.98□□□□□ -1.61
SMCO1-201ENST00000397537 IGHV3-35A0A0C4DH35 117 aa4.98□□□□□ -1.61
SMCO1-201ENST00000397537 OR2T8A6NH00 312 aa4.98□□□□□ -1.61
SMCO1-201ENST00000397537 FNDC10F2Z333 226 aa4.98□□□□□ -1.61
SMCO1-201ENST00000397537 M0R381 172 aa4.98□□□□□ -1.61
SMCO1-201ENST00000397537 LGALS9O00182 355 aa4.98□□□□□ -1.61
SMCO1-201ENST00000397537 GSTZ1O43708 216 aaPredicted RBP4.98□□□□□ -1.61
SMCO1-201ENST00000397537 LMX1BO60663 402 aa4.98□□□□□ -1.61
SMCO1-201ENST00000397537 CGAP01215 116 aa4.98□□□□□ -1.61
SMCO1-201ENST00000397537 BGLAPP02818 100 aa4.98□□□□□ -1.61
SMCO1-201ENST00000397537 LINC00313P59037 77 aa4.98□□□□□ -1.61
SMCO1-201ENST00000397537 SEC11AP67812 179 aa4.98□□□□□ -1.61
SMCO1-201ENST00000397537 Q6Q795 121 aa4.98□□□□□ -1.61
SMCO1-201ENST00000397537 PTPRBP23467 1997 aa4.98□□□□□ -1.61
SMCO1-201ENST00000397537 NAV3Q8IVL0 2385 aa4.98□□□□□ -1.61
SMCO1-201ENST00000397537 TRAV4A0A0B4J268 109 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 LOC107984640A0A0U1RRK4 108 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 NDUFC2-KCTD14E9PQ53 114 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 UBL3O95164 117 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 ZNF20P17024 532 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 PPP1CCP36873 323 aaKnown RBP4.97□□□□□ -1.61
SMCO1-201ENST00000397537 DSCR9P59020 149 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms