RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 PRR20BP86481 221 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 PRR20AP86496 221 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 CD69Q07108 199 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 CENPWQ5EE01 88 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 TREML4Q6UXN2 200 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 GGTLC1Q9BX51 225 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 HINT2Q9BX68 163 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 RNASE7Q9H1E1 156 aaKnown RBP4.28□□□□□ -1.72
VPS41-203ENST00000395969 BEX4Q9NWD9 120 aaPredicted RBP4.28□□□□□ -1.72
VPS41-203ENST00000395969 OR51B2Q9Y5P1 312 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 SPRY3O43610 288 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 PRTN3P24158 256 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 CEBPDP49716 269 aaPredicted RBP4.28□□□□□ -1.72
VPS41-203ENST00000395969 GNG4P50150 75 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 SEC11AP67812 179 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 RTL8BQ17RB0 113 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 SPINK9Q5DT21 86 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 LINC00528Q8N1L1 170 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 AJUBAQ96IF1 538 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 S1PR3Q99500 378 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 MGST2Q99735 147 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 MS4A6AQ9H2W1 248 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 SERTAD4Q9NUC0 356 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 ICE1Q9Y2F5 2266 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 TRBV6-1A0A0K0K1D8 114 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 C7orf71A4D174 169 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 FAM231BA6NCW3 169 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 SYS1-DBNDD2H3BUS1 97 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 K7EP34 96 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 ZNHIT1O43257 154 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 GATA3P23771 443 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 EFNA4P52798 201 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 FXYD3Q14802 87 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 GDF5OSQ5U4N7 250 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 RNASEKQ6P5S7 137 aaKnown RBP4.28□□□□□ -1.72
VPS41-203ENST00000395969 C2orf91Q6ZV80 131 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 LRRC75A-AS1Q8N1F1 130 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 OR4C13Q8NGP0 309 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 MBD6Q96DN6 1003 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 IGF2BP2-AS1Q96M15 143 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 SIRPDQ9H106 197 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 NPVFQ9HCQ7 196 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 ONECUT1Q9UBC0 465 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 WDFY4Q6ZS81 3184 aa4.28□□□□□ -1.73
VPS41-203ENST00000395969 C9orf118A6NHY6 69 aa4.27□□□□□ -1.73
VPS41-203ENST00000395969 F8WDY8 70 aa4.27□□□□□ -1.73
VPS41-203ENST00000395969 OR9G9P0C7N8 305 aa4.27□□□□□ -1.73
VPS41-203ENST00000395969 C19orf54Q5BKX5 351 aa4.27□□□□□ -1.73
VPS41-203ENST00000395969 PQLC2Q6ZP29 291 aa4.27□□□□□ -1.73
VPS41-203ENST00000395969 H2BFWTQ7Z2G1 175 aa4.27□□□□□ -1.73
VPS41-203ENST00000395969 ZNRF1Q8ND25 227 aa4.27□□□□□ -1.73
VPS41-203ENST00000395969 IL1F10Q8WWZ1 152 aa4.27□□□□□ -1.73
VPS41-203ENST00000395969 PSG11Q9UQ72 335 aa4.27□□□□□ -1.73
VPS41-203ENST00000395969 SPENQ96T58 3664 aaKnown RBP4.27□□□□□ -1.73
VPS41-203ENST00000395969 H3BRM9 83 aa4.27□□□□□ -1.73
VPS41-203ENST00000395969 BUB1B-PAK6H3BSN5 160 aa4.27□□□□□ -1.73
VPS41-203ENST00000395969 FOXE3Q13461 319 aa4.27□□□□□ -1.73
VPS41-203ENST00000395969 RAB31Q13636 194 aa4.27□□□□□ -1.73
VPS41-203ENST00000395969 IBA57Q5T440 356 aaKnown RBP4.27□□□□□ -1.73
VPS41-203ENST00000395969 OR2T6Q8NHC8 308 aa4.27□□□□□ -1.73
VPS41-203ENST00000395969 JMJD8Q96S16 334 aa4.27□□□□□ -1.73
VPS41-203ENST00000395969 KCNS2Q9ULS6 477 aa4.27□□□□□ -1.73
VPS41-203ENST00000395969 TSSC4Q9Y5U2 329 aaPredicted RBP4.27□□□□□ -1.73
VPS41-203ENST00000395969 GPR179Q6PRD1 2367 aa4.27□□□□□ -1.73
VPS41-203ENST00000395969 ZGRF1Q86YA3 2104 aa4.27□□□□□ -1.73
VPS41-203ENST00000395969 A0A1W2PPI3 338 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 FOXH1O75593 365 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 CA1P00915 261 aaPredicted RBP4.26□□□□□ -1.73
VPS41-203ENST00000395969 CD24P25063 80 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 GPR183P32249 361 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 HERV-K104P63124 156 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 CDSNQ15517 529 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 FAM162BQ5T6X4 162 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 MIC13Q5XKP0 118 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 FAM216BQ8N7L0 139 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 ZNF331Q9NQX6 463 aaPredicted RBP4.26□□□□□ -1.73
VPS41-203ENST00000395969 ARFGEF3Q5TH69 2177 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 TEX48A0A1B0GUV7 120 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 K7EMI3 77 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 CHEK1O14757 476 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 COX8AP10176 69 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 ERVK-16P61578 105 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 RPL8P62917 257 aaKnown RBP4.26□□□□□ -1.73
VPS41-203ENST00000395969 SPATA31B1PQ5VZV4 182 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 C9orf139Q6ZV77 190 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 FAM231DQ6ZW35 169 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 CHCHD1Q96BP2 118 aaKnown RBP4.26□□□□□ -1.73
VPS41-203ENST00000395969 CCL13Q99616 98 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 SIGMAR1Q99720 223 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 MRPL32Q9BYC8 188 aaKnown RBP4.26□□□□□ -1.73
VPS41-203ENST00000395969 NPFFR1Q9GZQ6 430 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 TMEM191AQ9H0A3 160 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 TCF19Q9Y242 345 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 CEP250Q9BV73 2442 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 TET2Q6N021 2002 aaPredicted RBP4.26□□□□□ -1.73
VPS41-203ENST00000395969 A0A096LNT2 108 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 IGHV1-24A0A0C4DH33 117 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 A0A1B0GXF2 115 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 TMEM189A5PLL7 270 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 NPIPB5A8MRT5 1133 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms