RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ITGB1BP1O14713 200 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 LYNX1P0DP58 116 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 GFI1Q99684 422 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 OVOL2Q9BRP0 275 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 NHP2Q9NX24 153 aaKnown RBP4.47□□□□□ -1.69
VPS13C-204ENST00000395898 IGKV1-27A0A075B6S5 117 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.47□□□□□ -1.69
VPS13C-204ENST00000395898 MST1P26927 711 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 HSD52Q0P140 79 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 C21orf62-AS1Q17RA5 79 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 H0YIZ8 118 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 SRD5A1P18405 259 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 EXOC3-AS1Q8N2X6 119 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 RPRMLQ8N4K4 120 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 DERL1Q9BUN8 251 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 SCRT1Q9BWW7 348 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 TRAV2A0A0B4J234 112 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 CD177Q8N6Q3 437 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 SSC4DQ8WTU2 575 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 RNF166Q96A37 237 aaPredicted RBP4.47□□□□□ -1.69
VPS13C-204ENST00000395898 NDUFAF3Q9BU61 184 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 DPH3P1Q9H4G8 78 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 TDGF1P3P51864 188 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 TMEM95Q3KNT9 176 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 TEX43Q6ZNM6 134 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 Q6ZS92 163 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 ERG28Q9UKR5 140 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 SRRM4A7MD48 611 aaKnown RBP4.47□□□□□ -1.69
VPS13C-204ENST00000395898 H3BUX3 64 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 TNFSF13O75888 250 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 FBLN7Q53RD9 439 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 CST9LQ9H4G1 147 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 D6R8Y8 96 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 NDUFB8O95169 186 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 IGHV4-39P01824 125 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 IGHG3P01860 377 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 SLC25A16P16260 332 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 NSUN5P1Q3KNT7 163 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 LCN12Q6JVE5 192 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 DAZ1Q9NQZ3 744 aaKnown RBP4.47□□□□□ -1.69
VPS13C-204ENST00000395898 NBASA2RRP1 2371 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 EFNA2O43921 213 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 PCP4P48539 62 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 PRB3Q04118 309 aaPredicted RBP4.47□□□□□ -1.69
VPS13C-204ENST00000395898 LINC01551Q86U37 167 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 HIST1H2BLQ99880 126 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 RNF114Q9Y508 228 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 IGKV2-40A0A087WW87 121 aaPredicted RBP4.46□□□□□ -1.69
VPS13C-204ENST00000395898 H3BUT2 72 aa4.46□□□□□ -1.69
VPS13C-204ENST00000395898 IGKV2D-40P01614 121 aaPredicted RBP4.46□□□□□ -1.69
VPS13C-204ENST00000395898 PPIFP30405 207 aaKnown RBP4.46□□□□□ -1.69
VPS13C-204ENST00000395898 RPL15P61313 204 aaKnown RBP4.46□□□□□ -1.69
VPS13C-204ENST00000395898 UNQ6494/PRO21346Q6UXR6 183 aa4.46□□□□□ -1.69
VPS13C-204ENST00000395898 TMEM219Q86XT9 240 aa4.46□□□□□ -1.69
VPS13C-204ENST00000395898 GFRA4Q9GZZ7 299 aa4.46□□□□□ -1.69
VPS13C-204ENST00000395898 ORAOV1Q8WV07 137 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 ST6GALNAC6Q969X2 333 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 IGKV1D-8A0A087WSZ0 117 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 INSP01308 110 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 RPP25LQ8N5L8 163 aaKnown RBP4.46□□□□□ -1.7
VPS13C-204ENST00000395898 JPT2Q9H910 190 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 CACNA1HO95180 2353 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 A8MWV9 139 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 SRSF3P84103 164 aaKnown RBP4.46□□□□□ -1.7
VPS13C-204ENST00000395898 ATXN8Q156A1 80 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 Q6P435 159 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 CD33P20138 364 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 LINC00158P58513 81 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 NUP35Q8NFH5 326 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 MRPL27Q9P0M9 148 aaKnown RBP4.46□□□□□ -1.7
VPS13C-204ENST00000395898 AMBPP02760 352 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 LGALS1P09382 135 aaKnown RBP4.46□□□□□ -1.7
VPS13C-204ENST00000395898 SAA4P35542 130 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 SAMD5Q5TGI4 173 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 PLEKHB2Q96CS7 222 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 DNAJC30Q96LL9 226 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 FNDC4Q9H6D8 234 aaPredicted RBP4.46□□□□□ -1.7
VPS13C-204ENST00000395898 TCRAP04437 139 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 GZMBP10144 247 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 CFPP27918 469 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 Q0VFX4 171 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 KLHL30-AS1Q8NEE0 82 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 CACNA1GO43497 2377 aa4.46□□□□□ -1.7
VPS13C-204ENST00000395898 ZNF106Q9H2Y7 1883 aaKnown RBP4.45□□□□□ -1.7
VPS13C-204ENST00000395898 TRAV12-3A0A0B4J271 114 aa4.45□□□□□ -1.7
VPS13C-204ENST00000395898 ZNF876PQ49A33 203 aa4.45□□□□□ -1.7
VPS13C-204ENST00000395898 GAGE13Q4V321 117 aa4.45□□□□□ -1.7
VPS13C-204ENST00000395898 PIP4P2Q8N4L2 257 aa4.45□□□□□ -1.7
VPS13C-204ENST00000395898 ERCC8Q13216 396 aa4.45□□□□□ -1.7
VPS13C-204ENST00000395898 ACTL10Q5JWF8 245 aa4.45□□□□□ -1.7
VPS13C-204ENST00000395898 LYL1P12980 280 aa4.45□□□□□ -1.7
VPS13C-204ENST00000395898 QRFPP83859 136 aa4.45□□□□□ -1.7
VPS13C-204ENST00000395898 ATRAIDQ6UW56 229 aa4.45□□□□□ -1.7
VPS13C-204ENST00000395898 C11orf44Q8N8P7 122 aa4.45□□□□□ -1.7
VPS13C-204ENST00000395898 CLPSP04118 112 aa4.45□□□□□ -1.7
VPS13C-204ENST00000395898 GAFA1Q96PS6 74 aa4.45□□□□□ -1.7
VPS13C-204ENST00000395898 TFF1P04155 84 aa4.45□□□□□ -1.7
VPS13C-204ENST00000395898 ZNF562Q6V9R5 426 aa4.45□□□□□ -1.7
VPS13C-204ENST00000395898 BMPERQ8N8U9 685 aa4.45□□□□□ -1.7
VPS13C-204ENST00000395898 TMEM75Q8N9X5 138 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms