RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 DEFB130AP0DP74 79 aa11.03□□□□□ -0.64
SNCA-205ENST00000394991 IL7P13232 177 aa11.03□□□□□ -0.64
SNCA-205ENST00000394991 NUP62P37198 522 aaPredicted RBP11.03□□□□□ -0.64
SNCA-205ENST00000394991 CCL18P55774 89 aa11.03□□□□□ -0.64
SNCA-205ENST00000394991 PPP1R1AQ13522 171 aa11.03□□□□□ -0.64
SNCA-205ENST00000394991 OR8G2PQ6IF36 304 aa11.03□□□□□ -0.64
SNCA-205ENST00000394991 EBLN2Q6P2I7 272 aa11.03□□□□□ -0.64
SNCA-205ENST00000394991 RNF141Q8WVD5 230 aa11.03□□□□□ -0.64
SNCA-205ENST00000394991 TMEM208Q9BTX3 173 aa11.03□□□□□ -0.64
SNCA-205ENST00000394991 CACFD1Q9UGQ2 172 aa11.03□□□□□ -0.64
SNCA-205ENST00000394991 PIGBOS1A0A0B4J2F0 54 aa11.02□□□□□ -0.65
SNCA-205ENST00000394991 ISLRO14498 428 aa11.02□□□□□ -0.65
SNCA-205ENST00000394991 FCN2Q15485 313 aa11.02□□□□□ -0.65
SNCA-205ENST00000394991 ETFRF1Q6IPR1 90 aa11.02□□□□□ -0.65
SNCA-205ENST00000394991 FLVCR2Q9UPI3 526 aa11.02□□□□□ -0.65
SNCA-205ENST00000394991 IGKV1D-37A0A075B6S9 117 aa11.01□□□□□ -0.65
SNCA-205ENST00000394991 DUXBA0A1W2PPF3 345 aa11.01□□□□□ -0.65
SNCA-205ENST00000394991 CRXO43186 299 aaPredicted RBP11.01□□□□□ -0.65
SNCA-205ENST00000394991 NDUFB6O95139 128 aa11.01□□□□□ -0.65
SNCA-205ENST00000394991 HOXB5P09067 269 aa11.01□□□□□ -0.65
SNCA-205ENST00000394991 INAFM2P0DMQ5 153 aa11.01□□□□□ -0.65
SNCA-205ENST00000394991 SSX7Q7RTT5 188 aa11.01□□□□□ -0.65
SNCA-205ENST00000394991 DTD1Q8TEA8 209 aa11.01□□□□□ -0.65
SNCA-205ENST00000394991 RBKSQ9H477 322 aa11.01□□□□□ -0.65
SNCA-205ENST00000394991 DOK5Q9P104 306 aa11.01□□□□□ -0.65
SNCA-205ENST00000394991 M0R2Z0 102 aa11□□□□□ -0.65
SNCA-205ENST00000394991 AZU1P20160 251 aa11□□□□□ -0.65
SNCA-205ENST00000394991 BTF3P20290 206 aaKnown RBP11□□□□□ -0.65
SNCA-205ENST00000394991 ZNF90Q03938 601 aa11□□□□□ -0.65
SNCA-205ENST00000394991 C1orf194Q5T5A4 169 aa11□□□□□ -0.65
SNCA-205ENST00000394991 LRTM2Q8N967 370 aa11□□□□□ -0.65
SNCA-205ENST00000394991 C17orf77Q96MU5 243 aa11□□□□□ -0.65
SNCA-205ENST00000394991 Q9H8V8 135 aa11□□□□□ -0.65
SNCA-205ENST00000394991 RPRMQ9NS64 109 aa11□□□□□ -0.65
SNCA-205ENST00000394991 HSPB7Q9UBY9 170 aa11□□□□□ -0.65
SNCA-205ENST00000394991 MYCBP2O75592 4640 aa11□□□□□ -0.65
SNCA-205ENST00000394991 ATP5G1P05496 136 aa10.99□□□□□ -0.65
SNCA-205ENST00000394991 BTCP35070 178 aa10.99□□□□□ -0.65
SNCA-205ENST00000394991 ATP5G3P48201 142 aa10.99□□□□□ -0.65
SNCA-205ENST00000394991 UBE2MP61081 183 aaKnown RBP10.99□□□□□ -0.65
SNCA-205ENST00000394991 LYZP61626 148 aa10.99□□□□□ -0.65
SNCA-205ENST00000394991 SPINK13Q1W4C9 94 aa10.99□□□□□ -0.65
SNCA-205ENST00000394991 CNPY1Q3B7I2 92 aa10.99□□□□□ -0.65
SNCA-205ENST00000394991 DMRTA1Q5VZB9 504 aa10.99□□□□□ -0.65
SNCA-205ENST00000394991 NOXA1Q86UR1 476 aa10.99□□□□□ -0.65
SNCA-205ENST00000394991 OR11H7Q8NGC8 314 aa10.99□□□□□ -0.65
SNCA-205ENST00000394991 PFDN2Q9UHV9 154 aa10.99□□□□□ -0.65
SNCA-205ENST00000394991 C9orf170A2RU37 121 aa10.98□□□□□ -0.65
SNCA-205ENST00000394991 INSP01308 110 aa10.98□□□□□ -0.65
SNCA-205ENST00000394991 OR4E1P0C645 316 aa10.98□□□□□ -0.65
SNCA-205ENST00000394991 ANXA7P20073 488 aaKnown RBP10.98□□□□□ -0.65
SNCA-205ENST00000394991 TSPOP30536 169 aa10.98□□□□□ -0.65
SNCA-205ENST00000394991 CLINT1Q14677 625 aa10.98□□□□□ -0.65
SNCA-205ENST00000394991 C4orf46Q504U0 113 aa10.98□□□□□ -0.65
SNCA-205ENST00000394991 BAP18Q8IXM2 172 aa10.98□□□□□ -0.65
SNCA-205ENST00000394991 Q9H3A6 140 aa10.98□□□□□ -0.65
SNCA-205ENST00000394991 U3KQ87 197 aa10.98□□□□□ -0.65
SNCA-205ENST00000394991 A6NHS1 94 aa10.97□□□□□ -0.65
SNCA-205ENST00000394991 ZFP92A6NM28 416 aa10.97□□□□□ -0.65
SNCA-205ENST00000394991 PLA2G10O15496 165 aa10.97□□□□□ -0.65
SNCA-205ENST00000394991 LYRM1O43325 122 aa10.97□□□□□ -0.65
SNCA-205ENST00000394991 PITX3O75364 302 aa10.97□□□□□ -0.65
SNCA-205ENST00000394991 IAPPP10997 89 aa10.97□□□□□ -0.65
SNCA-205ENST00000394991 CNN1P51911 297 aaKnown RBP10.97□□□□□ -0.65
SNCA-205ENST00000394991 DLK1P80370 383 aa10.97□□□□□ -0.65
SNCA-205ENST00000394991 TTC32Q5I0X7 151 aa10.97□□□□□ -0.65
SNCA-205ENST00000394991 GGNBP1Q5YKI7 109 aa10.97□□□□□ -0.65
SNCA-205ENST00000394991 OR8I2Q8N0Y5 310 aa10.97□□□□□ -0.65
SNCA-205ENST00000394991 C16orf92Q96LL3 132 aa10.97□□□□□ -0.65
SNCA-205ENST00000394991 UHRF2Q96PU4 802 aa10.97□□□□□ -0.65
SNCA-205ENST00000394991 SLC25A32Q9H2D1 315 aa10.97□□□□□ -0.65
SNCA-205ENST00000394991 PAIP2BQ9ULR5 123 aaKnown RBP10.97□□□□□ -0.65
SNCA-205ENST00000394991 CBY3A6NI87 242 aa10.96□□□□□ -0.65
SNCA-205ENST00000394991 MED6O75586 246 aa10.96□□□□□ -0.65
SNCA-205ENST00000394991 ADAP1O75689 374 aa10.96□□□□□ -0.65
SNCA-205ENST00000394991 SLC25A6P12236 298 aa10.96□□□□□ -0.65
SNCA-205ENST00000394991 OR2F1Q13607 317 aa10.96□□□□□ -0.65
SNCA-205ENST00000394991 GAMTQ14353 236 aa10.96□□□□□ -0.65
SNCA-205ENST00000394991 LYPD1Q8N2G4 141 aa10.96□□□□□ -0.65
SNCA-205ENST00000394991 PPP1R14BQ96C90 147 aa10.96□□□□□ -0.65
SNCA-205ENST00000394991 CCDC32Q9BV29 185 aa10.96□□□□□ -0.65
SNCA-205ENST00000394991 VPS13BQ7Z7G8 4022 aa10.95□□□□□ -0.66
SNCA-205ENST00000394991 TRAV12-2A0A075B6T6 113 aa10.95□□□□□ -0.66
SNCA-205ENST00000394991 FUSP35637 526 aaKnown RBP eCLIP10.95□□□□□ -0.66
SNCA-205ENST00000394991 MEOX2P50222 304 aa10.95□□□□□ -0.66
SNCA-205ENST00000394991 XGP55808 180 aa10.95□□□□□ -0.66
SNCA-205ENST00000394991 SAMD13Q5VXD3 122 aa10.95□□□□□ -0.66
SNCA-205ENST00000394991 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.95□□□□□ -0.66
SNCA-205ENST00000394991 S100ZQ8WXG8 99 aa10.95□□□□□ -0.66
SNCA-205ENST00000394991 C20orf85Q9H1P6 137 aa10.95□□□□□ -0.66
SNCA-205ENST00000394991 TRAV6A0A075B6T7 132 aa10.94□□□□□ -0.66
SNCA-205ENST00000394991 WRBO00258 174 aa10.94□□□□□ -0.66
SNCA-205ENST00000394991 SYNGR2O43760 224 aa10.94□□□□□ -0.66
SNCA-205ENST00000394991 B2MP61769 119 aa10.94□□□□□ -0.66
SNCA-205ENST00000394991 Q5VSD8 79 aa10.94□□□□□ -0.66
SNCA-205ENST00000394991 IGFL4Q6B9Z1 124 aa10.94□□□□□ -0.66
SNCA-205ENST00000394991 LINC00299Q6ZSB3 139 aa10.94□□□□□ -0.66
SNCA-205ENST00000394991 SLC35E1Q96K37 410 aa10.94□□□□□ -0.66
SNCA-205ENST00000394991 UPK3BQ9BT76 320 aa10.94□□□□□ -0.66
SNCA-205ENST00000394991 RSG1Q9BU20 258 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 172.4 ms