RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 ZNF826PQ6ZT77 177 aa8.95□□□□□ -0.98
CUX1-204ENST00000393824 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.95□□□□□ -0.98
CUX1-204ENST00000393824 OR2K2Q8NGT1 345 aa8.95□□□□□ -0.98
CUX1-204ENST00000393824 RFESDQ8TAC1 157 aa8.95□□□□□ -0.98
CUX1-204ENST00000393824 PPP1R35Q8TAP8 253 aa8.95□□□□□ -0.98
CUX1-204ENST00000393824 LRRC29Q8WV35 223 aa8.95□□□□□ -0.98
CUX1-204ENST00000393824 DDB2Q92466 427 aa8.95□□□□□ -0.98
CUX1-204ENST00000393824 FAM167A-AS1Q96KT0 104 aa8.95□□□□□ -0.98
CUX1-204ENST00000393824 RAB9BQ9NP90 201 aa8.95□□□□□ -0.98
CUX1-204ENST00000393824 ENY2Q9NPA8 101 aa8.95□□□□□ -0.98
CUX1-204ENST00000393824 DOPEY2Q9Y3R5 2298 aa8.95□□□□□ -0.98
CUX1-204ENST00000393824 IGHV3-13P01766 116 aa8.94□□□□□ -0.98
CUX1-204ENST00000393824 FOXA3P55318 350 aaPredicted RBP8.94□□□□□ -0.98
CUX1-204ENST00000393824 NUP37Q8NFH4 326 aa8.94□□□□□ -0.98
CUX1-204ENST00000393824 OR5A1Q8NGJ0 315 aa8.94□□□□□ -0.98
CUX1-204ENST00000393824 JMJD8Q96S16 334 aa8.94□□□□□ -0.98
CUX1-204ENST00000393824 GNG12Q9UBI6 72 aa8.94□□□□□ -0.98
CUX1-204ENST00000393824 FOXE3Q13461 319 aa8.94□□□□□ -0.98
CUX1-204ENST00000393824 POU2AF1Q16633 256 aa8.94□□□□□ -0.98
CUX1-204ENST00000393824 TCTEX1D4Q5JR98 221 aa8.94□□□□□ -0.98
CUX1-204ENST00000393824 PSMB11A5LHX3 300 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 PEX7O00628 323 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 SPRY3O43610 288 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 APOA2P02652 100 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 FGF6P10767 208 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 PRDX2P32119 198 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 CT83Q5H943 113 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 OR2Z1Q8NG97 314 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 OR10AG1Q8NH19 301 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 ADTRPQ96IZ2 230 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 SLC25A2Q9BXI2 301 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 PRSS22Q9GZN4 317 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 NPFFR1Q9GZQ6 430 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 VSTM5A8MXK1 200 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 H3BUT2 72 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 MGST3O14880 152 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 TFF1P04155 84 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 PLP1P60201 277 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 UBE2L3P68036 154 aaKnown RBP8.93□□□□□ -0.98
CUX1-204ENST00000393824 SHISA2Q6UWI4 295 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 ZNF329Q86UD4 541 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 VSTM2AQ8TAG5 236 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 IFI27L2Q9H2X8 130 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 PGPEP1Q9NXJ5 209 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 METRNQ9UJH8 293 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 ZNF257Q9Y2Q1 563 aa8.93□□□□□ -0.98
CUX1-204ENST00000393824 A0A0G2JLM5 398 aa8.92□□□□□ -0.98
CUX1-204ENST00000393824 A8MWL6 223 aa8.92□□□□□ -0.98
CUX1-204ENST00000393824 CFHR2P36980 270 aa8.92□□□□□ -0.98
CUX1-204ENST00000393824 LOXL3P58215 753 aa8.92□□□□□ -0.98
CUX1-204ENST00000393824 MTURNQ8N3F0 131 aa8.92□□□□□ -0.98
CUX1-204ENST00000393824 CD177Q8N6Q3 437 aa8.92□□□□□ -0.98
CUX1-204ENST00000393824 TPRX1Q8N7U7 411 aa8.92□□□□□ -0.98
CUX1-204ENST00000393824 NEU4Q8WWR8 484 aaPredicted RBP8.92□□□□□ -0.98
CUX1-204ENST00000393824 PRNDQ9UKY0 176 aa8.92□□□□□ -0.98
CUX1-204ENST00000393824 A1L4Q6 167 aa8.92□□□□□ -0.98
CUX1-204ENST00000393824 TMEM189A5PLL7 270 aa8.92□□□□□ -0.98
CUX1-204ENST00000393824 CRYGCP07315 174 aa8.92□□□□□ -0.98
CUX1-204ENST00000393824 CD3EP07766 207 aa8.92□□□□□ -0.98
CUX1-204ENST00000393824 HSD52Q0P140 79 aa8.92□□□□□ -0.98
CUX1-204ENST00000393824 RPL39P5Q59GN2 51 aa8.92□□□□□ -0.98
CUX1-204ENST00000393824 MOB3BQ86TA1 216 aa8.92□□□□□ -0.98
CUX1-204ENST00000393824 MCRIP2Q9BUT9 160 aaKnown RBP8.92□□□□□ -0.98
CUX1-204ENST00000393824 GFRA4Q9GZZ7 299 aa8.92□□□□□ -0.98
CUX1-204ENST00000393824 FAM234AQ9H0X4 552 aa8.92□□□□□ -0.98
CUX1-204ENST00000393824 THYN1Q9P016 225 aa8.92□□□□□ -0.98
CUX1-204ENST00000393824 SIVA1O15304 175 aa8.91□□□□□ -0.98
CUX1-204ENST00000393824 IGHV1-46P01743 117 aa8.91□□□□□ -0.98
CUX1-204ENST00000393824 MYCNOSP40205 109 aa8.91□□□□□ -0.98
CUX1-204ENST00000393824 TEX45Q8NA69 505 aa8.91□□□□□ -0.98
CUX1-204ENST00000393824 GTSF1Q8WW33 167 aa8.91□□□□□ -0.98
CUX1-204ENST00000393824 MLST8Q9BVC4 326 aa8.91□□□□□ -0.98
CUX1-204ENST00000393824 RPP21Q9H633 154 aaKnown RBP8.91□□□□□ -0.98
CUX1-204ENST00000393824 NGBQ9NPG2 151 aa8.91□□□□□ -0.98
CUX1-204ENST00000393824 RABAC1Q9UI14 185 aa8.91□□□□□ -0.98
CUX1-204ENST00000393824 KLF12Q9Y4X4 402 aa8.91□□□□□ -0.98
CUX1-204ENST00000393824 TRAV5A0A0B4J249 113 aa8.91□□□□□ -0.98
CUX1-204ENST00000393824 SRRM4A7MD48 611 aaKnown RBP8.91□□□□□ -0.98
CUX1-204ENST00000393824 CD24P25063 80 aa8.91□□□□□ -0.98
CUX1-204ENST00000393824 CCL8P80075 99 aa8.91□□□□□ -0.98
CUX1-204ENST00000393824 KIR3DS1Q14943 382 aa8.91□□□□□ -0.98
CUX1-204ENST00000393824 FAM201AQ5SY85 155 aa8.91□□□□□ -0.98
CUX1-204ENST00000393824 MORN5Q5VZ52 161 aa8.91□□□□□ -0.98
CUX1-204ENST00000393824 BOD1L2Q8IYS8 172 aa8.91□□□□□ -0.98
CUX1-204ENST00000393824 DCTN5Q9BTE1 182 aa8.91□□□□□ -0.98
CUX1-204ENST00000393824 ZNF747Q9BV97 191 aa8.91□□□□□ -0.98
CUX1-204ENST00000393824 HECTD1Q9ULT8 2610 aa8.9□□□□□ -0.98
CUX1-204ENST00000393824 A0A1W2PPM0 123 aa8.9□□□□□ -0.98
CUX1-204ENST00000393824 K7EQM0 130 aa8.9□□□□□ -0.98
CUX1-204ENST00000393824 SNAI2O43623 268 aa8.9□□□□□ -0.98
CUX1-204ENST00000393824 CGB3P0DN86 165 aa8.9□□□□□ -0.98
CUX1-204ENST00000393824 CGB7P0DN87 165 aa8.9□□□□□ -0.98
CUX1-204ENST00000393824 ZNF134P52741 427 aa8.9□□□□□ -0.98
CUX1-204ENST00000393824 CD300EQ496F6 205 aaPredicted RBP8.9□□□□□ -0.98
CUX1-204ENST00000393824 ZNF672Q499Z4 452 aaPredicted RBP8.9□□□□□ -0.98
CUX1-204ENST00000393824 C2orf83Q53S99 150 aa8.9□□□□□ -0.98
CUX1-204ENST00000393824 GCSAMQ8N6F7 178 aa8.9□□□□□ -0.98
CUX1-204ENST00000393824 OR4A5Q8NH83 315 aa8.9□□□□□ -0.98
CUX1-204ENST00000393824 OR9G1Q8NH87 305 aa8.9□□□□□ -0.98
CUX1-204ENST00000393824 MRAP2Q96G30 205 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 178 ms