RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 TNFRSF1AP19438 455 aa13.12□□□□□ -0.31
PHTF1-205ENST00000393357 FAM90A9PA6NNJ1 464 aa13.11□□□□□ -0.31
PHTF1-205ENST00000393357 FNDC10F2Z333 226 aa13.11□□□□□ -0.31
PHTF1-205ENST00000393357 IGKV3-15P01624 115 aa13.11□□□□□ -0.31
PHTF1-205ENST00000393357 PLGLAQ15195 96 aa13.11□□□□□ -0.31
PHTF1-205ENST00000393357 MRPL32Q9BYC8 188 aaKnown RBP13.11□□□□□ -0.31
PHTF1-205ENST00000393357 DKK2Q9UBU2 259 aa13.11□□□□□ -0.31
PHTF1-205ENST00000393357 IGKV1D-37A0A075B6S9 117 aa13.11□□□□□ -0.31
PHTF1-205ENST00000393357 CSN1S1P47710 185 aa13.11□□□□□ -0.31
PHTF1-205ENST00000393357 WIPF2Q8TF74 440 aaPredicted RBP13.11□□□□□ -0.31
PHTF1-205ENST00000393357 SMIM12Q96EX1 92 aa13.11□□□□□ -0.31
PHTF1-205ENST00000393357 A0A1W2PPI3 338 aa13.11□□□□□ -0.31
PHTF1-205ENST00000393357 TDHQ8IZJ6 230 aa13.11□□□□□ -0.31
PHTF1-205ENST00000393357 TMEM186Q96B77 213 aa13.11□□□□□ -0.31
PHTF1-205ENST00000393357 A0A1B0GUT8 65 aa13.1□□□□□ -0.31
PHTF1-205ENST00000393357 A1L4Q6 167 aa13.1□□□□□ -0.31
PHTF1-205ENST00000393357 COX8AP10176 69 aa13.1□□□□□ -0.31
PHTF1-205ENST00000393357 EVI2AP22794 236 aa13.1□□□□□ -0.31
PHTF1-205ENST00000393357 AMTNQ6UX39 209 aa13.1□□□□□ -0.31
PHTF1-205ENST00000393357 ZNF747Q9BV97 191 aa13.1□□□□□ -0.31
PHTF1-205ENST00000393357 TEX48A0A1B0GUV7 120 aa13.1□□□□□ -0.31
PHTF1-205ENST00000393357 PAX2Q02962 417 aa13.1□□□□□ -0.31
PHTF1-205ENST00000393357 KLF17Q5JT82 389 aaPredicted RBP13.1□□□□□ -0.31
PHTF1-205ENST00000393357 PET117Q6UWS5 81 aa13.1□□□□□ -0.31
PHTF1-205ENST00000393357 C8orf49Q96NF6 230 aa13.1□□□□□ -0.31
PHTF1-205ENST00000393357 TNRC6BQ9UPQ9 1833 aaKnown RBP13.1□□□□□ -0.31
PHTF1-205ENST00000393357 CHCHD1Q96BP2 118 aaKnown RBP13.09□□□□□ -0.31
PHTF1-205ENST00000393357 PSMB11A5LHX3 300 aa13.09□□□□□ -0.31
PHTF1-205ENST00000393357 C22orf34Q6ZV56 151 aa13.09□□□□□ -0.31
PHTF1-205ENST00000393357 FAM231DQ6ZW35 169 aa13.09□□□□□ -0.31
PHTF1-205ENST00000393357 NDUFA4L2Q9NRX3 87 aa13.09□□□□□ -0.31
PHTF1-205ENST00000393357 RNF7Q9UBF6 113 aa13.09□□□□□ -0.31
PHTF1-205ENST00000393357 PPIAL4CA0A0B4J2A2 164 aa13.09□□□□□ -0.31
PHTF1-205ENST00000393357 IGHV3-23P01764 117 aa13.09□□□□□ -0.31
PHTF1-205ENST00000393357 PPIAL4GP0DN37 164 aa13.09□□□□□ -0.31
PHTF1-205ENST00000393357 TMEM75Q8N9X5 138 aa13.09□□□□□ -0.31
PHTF1-205ENST00000393357 NHP2Q9NX24 153 aaKnown RBP13.09□□□□□ -0.31
PHTF1-205ENST00000393357 COL6A6A6NMZ7 2263 aa13.08□□□□□ -0.31
PHTF1-205ENST00000393357 A6NDN8 102 aa13.08□□□□□ -0.32
PHTF1-205ENST00000393357 LTAP01374 205 aa13.08□□□□□ -0.32
PHTF1-205ENST00000393357 PRSS1P07477 247 aa13.08□□□□□ -0.32
PHTF1-205ENST00000393357 PROCRQ9UNN8 238 aa13.08□□□□□ -0.32
PHTF1-205ENST00000393357 PSG3Q16557 428 aa13.08□□□□□ -0.32
PHTF1-205ENST00000393357 FDCSPQ8NFU4 85 aa13.08□□□□□ -0.32
PHTF1-205ENST00000393357 SUB1P53999 127 aaKnown RBP eCLIP13.07□□□□□ -0.32
PHTF1-205ENST00000393357 SAMD13Q5VXD3 122 aa13.07□□□□□ -0.32
PHTF1-205ENST00000393357 TMEM178AQ8NBL3 297 aa13.07□□□□□ -0.32
PHTF1-205ENST00000393357 Q8TAT8 98 aa13.07□□□□□ -0.32
PHTF1-205ENST00000393357 C7orf69Q9H7B7 122 aa13.07□□□□□ -0.32
PHTF1-205ENST00000393357 ZFHX2Q9C0A1 2572 aaPredicted RBP13.07□□□□□ -0.32
PHTF1-205ENST00000393357 COX7A1P24310 79 aa13.07□□□□□ -0.32
PHTF1-205ENST00000393357 FCGR2BP31994 310 aaPredicted RBP13.07□□□□□ -0.32
PHTF1-205ENST00000393357 FAM27E3Q08E93 113 aa13.07□□□□□ -0.32
PHTF1-205ENST00000393357 BCL6BQ8N143 479 aaPredicted RBP13.07□□□□□ -0.32
PHTF1-205ENST00000393357 JKAMPQ9P055 326 aa13.07□□□□□ -0.32
PHTF1-205ENST00000393357 CUBNO60494 3623 aa13.07□□□□□ -0.32
PHTF1-205ENST00000393357 CGB1A6NKQ9 187 aa13.07□□□□□ -0.32
PHTF1-205ENST00000393357 RASL11AQ6T310 242 aa13.07□□□□□ -0.32
PHTF1-205ENST00000393357 SH2D6Q7Z4S9 175 aa13.07□□□□□ -0.32
PHTF1-205ENST00000393357 ATP5L2Q7Z4Y8 100 aa13.07□□□□□ -0.32
PHTF1-205ENST00000393357 MDS2Q8NDY4 140 aa13.07□□□□□ -0.32
PHTF1-205ENST00000393357 C19orf24Q9BVV8 132 aa13.07□□□□□ -0.32
PHTF1-205ENST00000393357 ZNF788Q6ZQV5 615 aa13.06□□□□□ -0.32
PHTF1-205ENST00000393357 GTSCR1Q86UQ5 136 aa13.06□□□□□ -0.32
PHTF1-205ENST00000393357 GAFA1Q96PS6 74 aa13.06□□□□□ -0.32
PHTF1-205ENST00000393357 AGRNO00468 2067 aa13.06□□□□□ -0.32
PHTF1-205ENST00000393357 C9orf118A6NHY6 69 aa13.06□□□□□ -0.32
PHTF1-205ENST00000393357 GAS8-AS1O95177 125 aa13.06□□□□□ -0.32
PHTF1-205ENST00000393357 ZNF414Q96IQ9 312 aa13.06□□□□□ -0.32
PHTF1-205ENST00000393357 PRELID3AQ96N28 172 aa13.06□□□□□ -0.32
PHTF1-205ENST00000393357 TWIST1Q15672 202 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 MBNL2Q5VZF2 373 aaKnown RBP13.05□□□□□ -0.32
PHTF1-205ENST00000393357 LYZL1Q6UWQ5 148 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 FER1L6-AS2Q96M78 137 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 CLUHP3Q96NS8 147 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 SIGLEC8Q9NYZ4 499 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 FABP2P12104 132 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 FAM162BQ5T6X4 162 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 LYPD2Q6UXB3 125 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 Q86TA4 180 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 ANKRD11Q6UB99 2663 aaPredicted RBP13.05□□□□□ -0.32
PHTF1-205ENST00000393357 IGHV3OR16-13A0A075B7E8 117 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 IGHV3-74A0A0B4J1X5 117 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 CNIH1O95406 144 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 AZU1P20160 251 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 CKS2P33552 79 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 FXYD2P54710 66 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 LINC01545Q5VT33 79 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 SLC25A48Q6ZT89 311 aaKnown RBP13.05□□□□□ -0.32
PHTF1-205ENST00000393357 ZADH2Q8N4Q0 377 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 ZNF714Q96N38 554 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 FBXL15Q9H469 300 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 MSRB1Q9NZV6 116 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 HIGD1AQ9Y241 93 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 COL12A1Q99715 3063 aa13.05□□□□□ -0.32
PHTF1-205ENST00000393357 CRXO43186 299 aaPredicted RBP13.04□□□□□ -0.32
PHTF1-205ENST00000393357 SAMD5Q5TGI4 173 aa13.04□□□□□ -0.32
PHTF1-205ENST00000393357 CACNG8Q8WXS5 425 aa13.04□□□□□ -0.32
PHTF1-205ENST00000393357 TMEM133Q9H2Q1 129 aa13.04□□□□□ -0.32
PHTF1-205ENST00000393357 RALYQ9UKM9 306 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms