RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 DEFB127Q9H1M4 99 aa16.46■□□□□ 0.23
TMEFF1-201ENST00000374879 CXXC4Q9H2H0 198 aa16.46■□□□□ 0.23
TMEFF1-201ENST00000374879 MRPL16Q9NX20 251 aaKnown RBP16.46■□□□□ 0.23
TMEFF1-201ENST00000374879 CFAP47Q6ZTR5 3102 aa16.46■□□□□ 0.23
TMEFF1-201ENST00000374879 NCOR1O75376 2440 aa16.46■□□□□ 0.22
TMEFF1-201ENST00000374879 IGKV1D-37A0A075B6S9 117 aa16.46■□□□□ 0.22
TMEFF1-201ENST00000374879 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.46■□□□□ 0.22
TMEFF1-201ENST00000374879 SLC25A17O43808 307 aa16.46■□□□□ 0.22
TMEFF1-201ENST00000374879 ZNF883P0CG24 379 aa16.46■□□□□ 0.22
TMEFF1-201ENST00000374879 ORM2P19652 201 aa16.46■□□□□ 0.22
TMEFF1-201ENST00000374879 SLC25A48Q6ZT89 311 aaKnown RBP16.46■□□□□ 0.22
TMEFF1-201ENST00000374879 WFDC3Q8IUB2 231 aa16.46■□□□□ 0.22
TMEFF1-201ENST00000374879 LAMA5O15230 3695 aa16.45■□□□□ 0.22
TMEFF1-201ENST00000374879 RIGQ13278 110 aa16.45■□□□□ 0.22
TMEFF1-201ENST00000374879 INO80CQ6PI98 192 aaPredicted RBP16.45■□□□□ 0.22
TMEFF1-201ENST00000374879 RBMXL3Q8N7X1 1067 aaKnown RBP16.45■□□□□ 0.22
TMEFF1-201ENST00000374879 SRSF12Q8WXF0 261 aaKnown RBP16.45■□□□□ 0.22
TMEFF1-201ENST00000374879 FLYWCH2Q96CP2 140 aaKnown RBP16.45■□□□□ 0.22
TMEFF1-201ENST00000374879 C20orf78Q9BR46 151 aa16.45■□□□□ 0.22
TMEFF1-201ENST00000374879 CHAC1Q9BUX1 264 aa16.45■□□□□ 0.22
TMEFF1-201ENST00000374879 IGLL5B9A064 214 aa16.45■□□□□ 0.22
TMEFF1-201ENST00000374879 C16orf97H3BN30 126 aa16.45■□□□□ 0.22
TMEFF1-201ENST00000374879 KLRC4-KLRK1H3BQV0 150 aa16.45■□□□□ 0.22
TMEFF1-201ENST00000374879 IFI27L1Q96BM0 104 aa16.45■□□□□ 0.22
TMEFF1-201ENST00000374879 FZR1Q9UM11 496 aa16.45■□□□□ 0.22
TMEFF1-201ENST00000374879 SPENQ96T58 3664 aaKnown RBP16.44■□□□□ 0.22
TMEFF1-201ENST00000374879 ATP5IP56385 69 aaPredicted RBP16.44■□□□□ 0.22
TMEFF1-201ENST00000374879 MRPL36Q9P0J6 103 aaKnown RBP16.44■□□□□ 0.22
TMEFF1-201ENST00000374879 D6R8Y8 96 aa16.44■□□□□ 0.22
TMEFF1-201ENST00000374879 CALYQ9NYX4 217 aa16.44■□□□□ 0.22
TMEFF1-201ENST00000374879 TECTAO75443 2155 aa16.43■□□□□ 0.22
TMEFF1-201ENST00000374879 IGKV1D-17A0A075B6S4 117 aa16.43■□□□□ 0.22
TMEFF1-201ENST00000374879 GATA3P23771 443 aa16.43■□□□□ 0.22
TMEFF1-201ENST00000374879 ZNRF1Q8ND25 227 aa16.43■□□□□ 0.22
TMEFF1-201ENST00000374879 MDS2Q8NDY4 140 aa16.43■□□□□ 0.22
TMEFF1-201ENST00000374879 TPPP3Q9BW30 176 aa16.43■□□□□ 0.22
TMEFF1-201ENST00000374879 Q9H3A6 140 aa16.43■□□□□ 0.22
TMEFF1-201ENST00000374879 E7EUB6 86 aa16.43■□□□□ 0.22
TMEFF1-201ENST00000374879 KIR2DL2P43627 348 aaPredicted RBP16.43■□□□□ 0.22
TMEFF1-201ENST00000374879 PRNTQ86SH4 94 aa16.43■□□□□ 0.22
TMEFF1-201ENST00000374879 Q86TA4 180 aa16.43■□□□□ 0.22
TMEFF1-201ENST00000374879 HIGD1BQ9P298 99 aa16.43■□□□□ 0.22
TMEFF1-201ENST00000374879 hADV38S2A0JD32 116 aa16.42■□□□□ 0.22
TMEFF1-201ENST00000374879 ZNF785A8K8V0 405 aa16.42■□□□□ 0.22
TMEFF1-201ENST00000374879 ZNF479Q96JC4 524 aa16.42■□□□□ 0.22
TMEFF1-201ENST00000374879 ASCL2Q99929 193 aa16.42■□□□□ 0.22
TMEFF1-201ENST00000374879 ARFGEF3Q5TH69 2177 aa16.42■□□□□ 0.22
TMEFF1-201ENST00000374879 SERTM2A0A1B0GWG4 89 aa16.42■□□□□ 0.22
TMEFF1-201ENST00000374879 HBDP02042 147 aa16.42■□□□□ 0.22
TMEFF1-201ENST00000374879 GAGE13Q4V321 117 aa16.42■□□□□ 0.22
TMEFF1-201ENST00000374879 IGHV3OR15-7A0A075B7D8 119 aa16.41■□□□□ 0.22
TMEFF1-201ENST00000374879 NDUFS7O75251 213 aa16.41■□□□□ 0.22
TMEFF1-201ENST00000374879 TSPAN13O95857 204 aa16.41■□□□□ 0.22
TMEFF1-201ENST00000374879 SAA1P0DJI8 122 aaPredicted RBP16.41■□□□□ 0.22
TMEFF1-201ENST00000374879 C5orf64Q2M2E5 130 aa16.41■□□□□ 0.22
TMEFF1-201ENST00000374879 GATD1Q8NB37 220 aa16.41■□□□□ 0.22
TMEFF1-201ENST00000374879 SPRR3Q9UBC9 169 aa16.41■□□□□ 0.22
TMEFF1-201ENST00000374879 C8orf86Q6ZUL3 223 aa16.41■□□□□ 0.22
TMEFF1-201ENST00000374879 CEND1Q8N111 149 aa16.41■□□□□ 0.22
TMEFF1-201ENST00000374879 ZNF418Q8TF45 676 aaPredicted RBP16.41■□□□□ 0.22
TMEFF1-201ENST00000374879 PRO0461Q9UI25 63 aa16.41■□□□□ 0.22
TMEFF1-201ENST00000374879 TRBV25-1A0A075B6N4 114 aa16.4■□□□□ 0.22
TMEFF1-201ENST00000374879 CT45A10P0DMU9 189 aa16.4■□□□□ 0.22
TMEFF1-201ENST00000374879 ERHP84090 104 aaKnown RBP16.4■□□□□ 0.22
TMEFF1-201ENST00000374879 C17orf58Q2M2W7 97 aa16.4■□□□□ 0.22
TMEFF1-201ENST00000374879 PRELID3AQ96N28 172 aa16.4■□□□□ 0.22
TMEFF1-201ENST00000374879 TM2D2Q9BX73 214 aa16.4■□□□□ 0.22
TMEFF1-201ENST00000374879 TRGV5A0A0B4J1U4 118 aa16.39■□□□□ 0.21
TMEFF1-201ENST00000374879 PRB4P10163 310 aaPredicted RBP16.39■□□□□ 0.21
TMEFF1-201ENST00000374879 PAX8Q06710 450 aa16.39■□□□□ 0.21
TMEFF1-201ENST00000374879 ATP1A1-AS1Q5TC04 95 aa16.39■□□□□ 0.21
TMEFF1-201ENST00000374879 NDUFA4L2Q9NRX3 87 aa16.39■□□□□ 0.21
TMEFF1-201ENST00000374879 PRR14LQ5THK1 2151 aa16.39■□□□□ 0.21
TMEFF1-201ENST00000374879 WI2-2373I1.2A0A1W2PRP0 233 aa16.39■□□□□ 0.21
TMEFF1-201ENST00000374879 IGLV2-11P01706 119 aa16.39■□□□□ 0.21
TMEFF1-201ENST00000374879 SPINK8P0C7L1 97 aa16.39■□□□□ 0.21
TMEFF1-201ENST00000374879 RUSC1-AS1Q66K80 236 aa16.39■□□□□ 0.21
TMEFF1-201ENST00000374879 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.39■□□□□ 0.21
TMEFF1-201ENST00000374879 TIMM8AO60220 97 aaPredicted RBP16.38■□□□□ 0.21
TMEFF1-201ENST00000374879 PPIFP30405 207 aaKnown RBP16.38■□□□□ 0.21
TMEFF1-201ENST00000374879 ZNF502Q8TBZ5 544 aa16.38■□□□□ 0.21
TMEFF1-201ENST00000374879 CDIP1Q9H305 208 aa16.38■□□□□ 0.21
TMEFF1-201ENST00000374879 ZNRD1Q9P1U0 126 aa16.38■□□□□ 0.21
TMEFF1-201ENST00000374879 LINC00312Q9Y6C7 94 aa16.38■□□□□ 0.21
TMEFF1-201ENST00000374879 CD59P13987 128 aa16.38■□□□□ 0.21
TMEFF1-201ENST00000374879 GOLT1AQ6ZVE7 132 aa16.38■□□□□ 0.21
TMEFF1-201ENST00000374879 TTC9CQ8N5M4 171 aa16.38■□□□□ 0.21
TMEFF1-201ENST00000374879 SS18L2Q9UHA2 77 aa16.38■□□□□ 0.21
TMEFF1-201ENST00000374879 AMN1Q8IY45 258 aa16.37■□□□□ 0.21
TMEFF1-201ENST00000374879 SYT8Q8NBV8 401 aa16.37■□□□□ 0.21
TMEFF1-201ENST00000374879 RNF183Q96D59 192 aa16.37■□□□□ 0.21
TMEFF1-201ENST00000374879 HHLA3Q9XRX5 114 aa16.37■□□□□ 0.21
TMEFF1-201ENST00000374879 NAV3Q8IVL0 2385 aa16.37■□□□□ 0.21
TMEFF1-201ENST00000374879 A0A1B0GWB2 263 aa16.37■□□□□ 0.21
TMEFF1-201ENST00000374879 LYZL6O75951 148 aa16.37■□□□□ 0.21
TMEFF1-201ENST00000374879 MT-ATP8P03928 68 aa16.37■□□□□ 0.21
TMEFF1-201ENST00000374879 CGB3P0DN86 165 aa16.37■□□□□ 0.21
TMEFF1-201ENST00000374879 CGB7P0DN87 165 aa16.37■□□□□ 0.21
TMEFF1-201ENST00000374879 GP9P14770 177 aa16.37■□□□□ 0.21
TMEFF1-201ENST00000374879 A6NJY4 79 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms