RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 RNF182Q8N6D2 247 aa9.67□□□□□ -0.86
CXCL12-202ENST00000374426 OR4D5Q8NGN0 318 aa9.67□□□□□ -0.86
CXCL12-202ENST00000374426 RABL2AQ9UBK7 228 aaPredicted RBP9.67□□□□□ -0.86
CXCL12-202ENST00000374426 PAIP2BQ9ULR5 123 aaKnown RBP9.67□□□□□ -0.86
CXCL12-202ENST00000374426 RABL2BQ9UNT1 228 aa9.67□□□□□ -0.86
CXCL12-202ENST00000374426 F5H768 121 aa9.66□□□□□ -0.86
CXCL12-202ENST00000374426 DUSP14O95147 198 aaKnown RBP9.66□□□□□ -0.86
CXCL12-202ENST00000374426 ORM2P19652 201 aa9.66□□□□□ -0.86
CXCL12-202ENST00000374426 AZU1P20160 251 aa9.66□□□□□ -0.86
CXCL12-202ENST00000374426 FCN2Q15485 313 aa9.66□□□□□ -0.86
CXCL12-202ENST00000374426 OR1B1Q8NGR6 318 aa9.66□□□□□ -0.86
CXCL12-202ENST00000374426 HERC1Q15751 4861 aa9.65□□□□□ -0.86
CXCL12-202ENST00000374426 TRAV12-2A0A075B6T6 113 aa9.65□□□□□ -0.86
CXCL12-202ENST00000374426 DUXBA0A1W2PPF3 345 aa9.65□□□□□ -0.86
CXCL12-202ENST00000374426 NUDT3O95989 172 aa9.65□□□□□ -0.86
CXCL12-202ENST00000374426 SLC25A6P12236 298 aa9.65□□□□□ -0.86
CXCL12-202ENST00000374426 B2MP61769 119 aa9.65□□□□□ -0.86
CXCL12-202ENST00000374426 GPR141Q7Z602 305 aa9.65□□□□□ -0.86
CXCL12-202ENST00000374426 MAPKAPK5-AS1Q8N8E1 139 aa9.65□□□□□ -0.86
CXCL12-202ENST00000374426 BPIFCQ8NFQ6 507 aa9.65□□□□□ -0.86
CXCL12-202ENST00000374426 GPR82Q96P67 336 aa9.65□□□□□ -0.86
CXCL12-202ENST00000374426 SLC25A39Q9BZJ4 359 aaPredicted RBP9.65□□□□□ -0.86
CXCL12-202ENST00000374426 LINC00588Q9Y4M8 146 aa9.65□□□□□ -0.86
CXCL12-202ENST00000374426 PIGBOS1A0A0B4J2F0 54 aa9.64□□□□□ -0.87
CXCL12-202ENST00000374426 ATP5G1P05496 136 aa9.64□□□□□ -0.87
CXCL12-202ENST00000374426 ATP5G3P48201 142 aa9.64□□□□□ -0.87
CXCL12-202ENST00000374426 TMEM128Q5BJH2 165 aa9.64□□□□□ -0.87
CXCL12-202ENST00000374426 TMED4Q7Z7H5 227 aa9.64□□□□□ -0.87
CXCL12-202ENST00000374426 LRTM2Q8N967 370 aa9.64□□□□□ -0.87
CXCL12-202ENST00000374426 DYNC2LI1Q8TCX1 351 aa9.64□□□□□ -0.87
CXCL12-202ENST00000374426 CIB3Q96Q77 187 aaPredicted RBP9.64□□□□□ -0.87
CXCL12-202ENST00000374426 SOSTQ9BQB4 213 aa9.64□□□□□ -0.87
CXCL12-202ENST00000374426 TMEM147Q9BVK8 224 aa9.64□□□□□ -0.87
CXCL12-202ENST00000374426 CCDC59Q9P031 241 aaKnown RBP9.64□□□□□ -0.87
CXCL12-202ENST00000374426 RSL24D1Q9UHA3 163 aaKnown RBP9.64□□□□□ -0.87
CXCL12-202ENST00000374426 CBY3A6NI87 242 aa9.63□□□□□ -0.87
CXCL12-202ENST00000374426 H3BRN7 92 aa9.63□□□□□ -0.87
CXCL12-202ENST00000374426 BOLA2-SMG1P6H3BVE0 249 aa9.63□□□□□ -0.87
CXCL12-202ENST00000374426 WRBO00258 174 aa9.63□□□□□ -0.87
CXCL12-202ENST00000374426 SYNGR2O43760 224 aa9.63□□□□□ -0.87
CXCL12-202ENST00000374426 MED6O75586 246 aa9.63□□□□□ -0.87
CXCL12-202ENST00000374426 CCL18P55774 89 aa9.63□□□□□ -0.87
CXCL12-202ENST00000374426 RPP30P78346 268 aaKnown RBP9.63□□□□□ -0.87
CXCL12-202ENST00000374426 FGL1Q08830 312 aa9.63□□□□□ -0.87
CXCL12-202ENST00000374426 ACOT7LQ6ZUV0 252 aa9.63□□□□□ -0.87
CXCL12-202ENST00000374426 ZNF738Q8NE65 137 aa9.63□□□□□ -0.87
CXCL12-202ENST00000374426 RNF141Q8WVD5 230 aa9.63□□□□□ -0.87
CXCL12-202ENST00000374426 H3BP45 60 aa9.62□□□□□ -0.87
CXCL12-202ENST00000374426 VAMP1P23763 118 aa9.62□□□□□ -0.87
CXCL12-202ENST00000374426 AKR1C1Q04828 323 aa9.62□□□□□ -0.87
CXCL12-202ENST00000374426 SPANXN5Q5MJ07 72 aa9.62□□□□□ -0.87
CXCL12-202ENST00000374426 LINC01587Q99440 93 aa9.62□□□□□ -0.87
CXCL12-202ENST00000374426 SHANK2-AS3Q9BTD1 123 aa9.62□□□□□ -0.87
CXCL12-202ENST00000374426 PRB4P10163 310 aaPredicted RBP9.61□□□□□ -0.87
CXCL12-202ENST00000374426 CXCL3P19876 107 aa9.61□□□□□ -0.87
CXCL12-202ENST00000374426 S100A7P31151 101 aa9.61□□□□□ -0.87
CXCL12-202ENST00000374426 TNFSF8P32971 234 aa9.61□□□□□ -0.87
CXCL12-202ENST00000374426 TAS2R60P59551 318 aa9.61□□□□□ -0.87
CXCL12-202ENST00000374426 HIST1H1AQ02539 215 aaPredicted RBP9.61□□□□□ -0.87
CXCL12-202ENST00000374426 SSX7Q7RTT5 188 aa9.61□□□□□ -0.87
CXCL12-202ENST00000374426 TMEM144Q7Z5S9 345 aa9.61□□□□□ -0.87
CXCL12-202ENST00000374426 TMEM256Q8N2U0 113 aa9.61□□□□□ -0.87
CXCL12-202ENST00000374426 OR8A1Q8NGG7 326 aa9.61□□□□□ -0.87
CXCL12-202ENST00000374426 MRPS26Q9BYN8 205 aaKnown RBP9.61□□□□□ -0.87
CXCL12-202ENST00000374426 SLIRPQ9GZT3 109 aaKnown RBP9.61□□□□□ -0.87
CXCL12-202ENST00000374426 FABP12A6NFH5 140 aa9.6□□□□□ -0.87
CXCL12-202ENST00000374426 IL5P05113 134 aa9.6□□□□□ -0.87
CXCL12-202ENST00000374426 HTN1P15515 57 aa9.6□□□□□ -0.87
CXCL12-202ENST00000374426 RPL7P18124 248 aaKnown RBP9.6□□□□□ -0.87
CXCL12-202ENST00000374426 RHOBP62745 196 aa9.6□□□□□ -0.87
CXCL12-202ENST00000374426 PPP1R1AQ13522 171 aa9.6□□□□□ -0.87
CXCL12-202ENST00000374426 CLINT1Q14677 625 aa9.6□□□□□ -0.87
CXCL12-202ENST00000374426 CYP2G1PQ6ZSU1 146 aa9.6□□□□□ -0.87
CXCL12-202ENST00000374426 Q8N1X5 172 aa9.6□□□□□ -0.87
CXCL12-202ENST00000374426 RAB2BQ8WUD1 216 aa9.6□□□□□ -0.87
CXCL12-202ENST00000374426 TRIM63Q969Q1 353 aa9.6□□□□□ -0.87
CXCL12-202ENST00000374426 C16orf74Q96GX8 76 aa9.6□□□□□ -0.87
CXCL12-202ENST00000374426 UHRF2Q96PU4 802 aa9.6□□□□□ -0.87
CXCL12-202ENST00000374426 KRTAP1-5Q9BYS1 174 aa9.6□□□□□ -0.87
CXCL12-202ENST00000374426 HIGD1AQ9Y241 93 aa9.6□□□□□ -0.87
CXCL12-202ENST00000374426 STRAPQ9Y3F4 350 aaKnown RBP9.6□□□□□ -0.87
CXCL12-202ENST00000374426 TIMM8BQ9Y5J9 83 aaPredicted RBP9.6□□□□□ -0.87
CXCL12-202ENST00000374426 A0A087X0K7 114 aa9.59□□□□□ -0.87
CXCL12-202ENST00000374426 SMCO3A2RU48 225 aa9.59□□□□□ -0.87
CXCL12-202ENST00000374426 HYPMO75409 117 aa9.59□□□□□ -0.87
CXCL12-202ENST00000374426 SFT2D2O95562 160 aa9.59□□□□□ -0.87
CXCL12-202ENST00000374426 HOXB5P09067 269 aa9.59□□□□□ -0.87
CXCL12-202ENST00000374426 LINC00869P0C866 280 aa9.59□□□□□ -0.87
CXCL12-202ENST00000374426 FAUP35544 74 aaKnown RBP9.59□□□□□ -0.87
CXCL12-202ENST00000374426 RAP2BP61225 183 aa9.59□□□□□ -0.87
CXCL12-202ENST00000374426 PSG3Q16557 428 aa9.59□□□□□ -0.87
CXCL12-202ENST00000374426 SPATA12Q7Z6I5 190 aa9.59□□□□□ -0.87
CXCL12-202ENST00000374426 RNASE8Q8TDE3 154 aaKnown RBP9.59□□□□□ -0.87
CXCL12-202ENST00000374426 Q9H8V8 135 aa9.59□□□□□ -0.87
CXCL12-202ENST00000374426 NOP10Q9NPE3 64 aaKnown RBP9.59□□□□□ -0.87
CXCL12-202ENST00000374426 OR5G3P0C626 314 aa9.58□□□□□ -0.88
CXCL12-202ENST00000374426 PLP1P60201 277 aa9.58□□□□□ -0.88
CXCL12-202ENST00000374426 ZNF493Q6ZR52 646 aa9.58□□□□□ -0.88
CXCL12-202ENST00000374426 TMEM263Q8WUH6 116 aaKnown RBP9.58□□□□□ -0.88
CXCL12-202ENST00000374426 SLC25A21Q9BQT8 299 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms