RNA–Protein interactions for RNA: ENST00000373034.8

PCDH19-202, Transcript of protocadherin 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH19, Length 9,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-202ENST00000373034 TRGV9Q99603 122 aa12.78□□□□□ -0.36
PCDH19-202ENST00000373034 ZNF319Q9P2F9 582 aa12.78□□□□□ -0.36
PCDH19-202ENST00000373034 IGKV2-40A0A087WW87 121 aaPredicted RBP12.77□□□□□ -0.36
PCDH19-202ENST00000373034 C9orf118A6NHY6 69 aa12.77□□□□□ -0.36
PCDH19-202ENST00000373034 PMS2P5A8MQ11 134 aa12.77□□□□□ -0.36
PCDH19-202ENST00000373034 IGKV2D-40P01614 121 aaPredicted RBP12.77□□□□□ -0.36
PCDH19-202ENST00000373034 TCF20Q9UGU0 1960 aaKnown RBP12.77□□□□□ -0.36
PCDH19-202ENST00000373034 FDCSPQ8NFU4 85 aa12.77□□□□□ -0.36
PCDH19-202ENST00000373034 hADV29S1A0JD25 119 aa12.77□□□□□ -0.37
PCDH19-202ENST00000373034 IGHG4P01861 327 aa12.77□□□□□ -0.37
PCDH19-202ENST00000373034 TCRAP04437 139 aa12.77□□□□□ -0.37
PCDH19-202ENST00000373034 ZNF474Q6S9Z5 364 aaPredicted RBP12.77□□□□□ -0.37
PCDH19-202ENST00000373034 LINC01551Q86U37 167 aa12.77□□□□□ -0.37
PCDH19-202ENST00000373034 SRRM4A7MD48 611 aaKnown RBP12.77□□□□□ -0.37
PCDH19-202ENST00000373034 LYZL1Q6UWQ5 148 aa12.77□□□□□ -0.37
PCDH19-202ENST00000373034 PLXNA3P51805 1871 aa12.77□□□□□ -0.37
PCDH19-202ENST00000373034 NKAPP1Q8N9T2 125 aa12.77□□□□□ -0.37
PCDH19-202ENST00000373034 C1orf159Q96HA4 380 aa12.77□□□□□ -0.37
PCDH19-202ENST00000373034 DSCAML1Q8TD84 2053 aa12.76□□□□□ -0.37
PCDH19-202ENST00000373034 GREM1O60565 184 aa12.76□□□□□ -0.37
PCDH19-202ENST00000373034 IGHV3-73A0A0B4J1V6 119 aa12.76□□□□□ -0.37
PCDH19-202ENST00000373034 C17orf100A8MU93 164 aa12.76□□□□□ -0.37
PCDH19-202ENST00000373034 TMEM141Q96I45 108 aa12.76□□□□□ -0.37
PCDH19-202ENST00000373034 PCDH15Q96QU1 1955 aa12.76□□□□□ -0.37
PCDH19-202ENST00000373034 NCOA6Q14686 2063 aaPredicted RBP12.76□□□□□ -0.37
PCDH19-202ENST00000373034 C5orf67F2Z3F1 127 aa12.75□□□□□ -0.37
PCDH19-202ENST00000373034 A0A0G2JMZ2 1700 aa12.75□□□□□ -0.37
PCDH19-202ENST00000373034 LRRC37A2A6NM11 1700 aa12.75□□□□□ -0.37
PCDH19-202ENST00000373034 LRRC37AA6NMS7 1700 aa12.75□□□□□ -0.37
PCDH19-202ENST00000373034 WNT2P09544 360 aa12.75□□□□□ -0.37
PCDH19-202ENST00000373034 TCF15Q12870 199 aa12.75□□□□□ -0.37
PCDH19-202ENST00000373034 ZC2HC1BQ5TFG8 222 aa12.75□□□□□ -0.37
PCDH19-202ENST00000373034 MED13LQ71F56 2210 aa12.75□□□□□ -0.37
PCDH19-202ENST00000373034 C15orf32Q32M92 178 aa12.75□□□□□ -0.37
PCDH19-202ENST00000373034 EXOC3-AS1Q8N2X6 119 aa12.75□□□□□ -0.37
PCDH19-202ENST00000373034 SLAQ13239 276 aa12.75□□□□□ -0.37
PCDH19-202ENST00000373034 C3orf79P0CE67 100 aa12.75□□□□□ -0.37
PCDH19-202ENST00000373034 HAMPP81172 84 aa12.75□□□□□ -0.37
PCDH19-202ENST00000373034 BOD1L2Q8IYS8 172 aa12.75□□□□□ -0.37
PCDH19-202ENST00000373034 COL24A1Q17RW2 1714 aa12.75□□□□□ -0.37
PCDH19-202ENST00000373034 ZNF561-AS1K7EIQ3 104 aa12.74□□□□□ -0.37
PCDH19-202ENST00000373034 FAM216BQ8N7L0 139 aa12.74□□□□□ -0.37
PCDH19-202ENST00000373034 FCN3O75636 299 aa12.74□□□□□ -0.37
PCDH19-202ENST00000373034 ANKRD29Q8N6D5 301 aa12.74□□□□□ -0.37
PCDH19-202ENST00000373034 CDCP2Q5VXM1 449 aa12.74□□□□□ -0.37
PCDH19-202ENST00000373034 MED13Q9UHV7 2174 aa12.74□□□□□ -0.37
PCDH19-202ENST00000373034 TRAV13-2A0A0B4J235 113 aa12.74□□□□□ -0.37
PCDH19-202ENST00000373034 A8MWP6 167 aa12.74□□□□□ -0.37
PCDH19-202ENST00000373034 SH2D1AO60880 128 aa12.73□□□□□ -0.37
PCDH19-202ENST00000373034 TREML4Q6UXN2 200 aa12.73□□□□□ -0.37
PCDH19-202ENST00000373034 TRPT1Q86TN4 253 aaKnown RBP12.73□□□□□ -0.37
PCDH19-202ENST00000373034 THAP8Q8NA92 274 aa12.73□□□□□ -0.37
PCDH19-202ENST00000373034 MRPS18CQ9Y3D5 142 aaKnown RBP12.73□□□□□ -0.37
PCDH19-202ENST00000373034 LCN12Q6JVE5 192 aa12.73□□□□□ -0.37
PCDH19-202ENST00000373034 LIME1Q9H400 295 aa12.73□□□□□ -0.37
PCDH19-202ENST00000373034 LINC01560Q8TB33 94 aa12.73□□□□□ -0.37
PCDH19-202ENST00000373034 FBLN5Q9UBX5 448 aa12.73□□□□□ -0.37
PCDH19-202ENST00000373034 PSG7Q13046 419 aa12.73□□□□□ -0.37
PCDH19-202ENST00000373034 C5orf47Q569G3 176 aa12.73□□□□□ -0.37
PCDH19-202ENST00000373034 TRAV13-1A0A0B4J241 112 aa12.72□□□□□ -0.37
PCDH19-202ENST00000373034 GAGE12HA6NDE8 117 aa12.72□□□□□ -0.37
PCDH19-202ENST00000373034 C9orf139Q6ZV77 190 aa12.72□□□□□ -0.37
PCDH19-202ENST00000373034 C1QCP02747 245 aa12.72□□□□□ -0.37
PCDH19-202ENST00000373034 NHSL1Q5SYE7 1610 aa12.72□□□□□ -0.37
PCDH19-202ENST00000373034 C1orf53Q5VUE5 145 aa12.72□□□□□ -0.37
PCDH19-202ENST00000373034 TSSC4Q9Y5U2 329 aaPredicted RBP12.72□□□□□ -0.37
PCDH19-202ENST00000373034 OR11H6Q8NGC7 330 aa12.72□□□□□ -0.37
PCDH19-202ENST00000373034 SLC25A28Q96A46 364 aa12.72□□□□□ -0.37
PCDH19-202ENST00000373034 FAM231BA6NCW3 169 aa12.72□□□□□ -0.37
PCDH19-202ENST00000373034 PATE3B3GLJ2 98 aa12.71□□□□□ -0.37
PCDH19-202ENST00000373034 SMIM10L1P0DMW3 83 aa12.71□□□□□ -0.37
PCDH19-202ENST00000373034 ID3Q02535 119 aa12.71□□□□□ -0.37
PCDH19-202ENST00000373034 SMIM10Q96HG1 83 aa12.71□□□□□ -0.37
PCDH19-202ENST00000373034 IL9P15248 144 aa12.71□□□□□ -0.37
PCDH19-202ENST00000373034 PDE6HQ13956 83 aa12.71□□□□□ -0.37
PCDH19-202ENST00000373034 RPL15P61313 204 aaKnown RBP12.71□□□□□ -0.37
PCDH19-202ENST00000373034 SPSB2Q99619 263 aa12.71□□□□□ -0.37
PCDH19-202ENST00000373034 LY6G6FQ5SQ64 297 aa12.71□□□□□ -0.37
PCDH19-202ENST00000373034 ZNF664Q8N3J9 261 aa12.71□□□□□ -0.37
PCDH19-202ENST00000373034 CACNA1HO95180 2353 aa12.71□□□□□ -0.37
PCDH19-202ENST00000373034 K7EP13 123 aa12.71□□□□□ -0.37
PCDH19-202ENST00000373034 FGF6P10767 208 aa12.71□□□□□ -0.38
PCDH19-202ENST00000373034 TMEM256Q8N2U0 113 aa12.71□□□□□ -0.38
PCDH19-202ENST00000373034 CHCHD2Q9Y6H1 151 aaPredicted RBP12.71□□□□□ -0.38
PCDH19-202ENST00000373034 IGHV1-24A0A0C4DH33 117 aa12.71□□□□□ -0.38
PCDH19-202ENST00000373034 SELENOKQ9Y6D0 94 aa12.71□□□□□ -0.38
PCDH19-202ENST00000373034 TRAV25A0A0B4J276 109 aa12.7□□□□□ -0.38
PCDH19-202ENST00000373034 NDUFS5O43920 106 aa12.7□□□□□ -0.38
PCDH19-202ENST00000373034 BTCP35070 178 aa12.7□□□□□ -0.38
PCDH19-202ENST00000373034 USMG5Q96IX5 58 aa12.7□□□□□ -0.38
PCDH19-202ENST00000373034 ZSWIM8A7E2V4 1837 aa12.7□□□□□ -0.38
PCDH19-202ENST00000373034 COL5A3P25940 1745 aaPredicted RBP12.7□□□□□ -0.38
PCDH19-202ENST00000373034 HLA-DMBP28068 263 aa12.7□□□□□ -0.38
PCDH19-202ENST00000373034 IL17RELQ6ZVW7 336 aa12.7□□□□□ -0.38
PCDH19-202ENST00000373034 C14orf178Q8N769 122 aaPredicted RBP12.7□□□□□ -0.38
PCDH19-202ENST00000373034 WDR83OSQ9Y284 106 aa12.7□□□□□ -0.38
PCDH19-202ENST00000373034 WNK1Q9H4A3 2382 aa12.7□□□□□ -0.38
PCDH19-202ENST00000373034 CHKB-CPT1BH3BT56 60 aa12.7□□□□□ -0.38
PCDH19-202ENST00000373034 SAP30O75446 220 aa12.7□□□□□ -0.38
PCDH19-202ENST00000373034 PYY3Q5JQD4 70 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms