RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 NTF4P34130 210 aa9.39□□□□□ -0.91
VCL-202ENST00000372755 HGFACQ04756 655 aa9.39□□□□□ -0.91
VCL-202ENST00000372755 PDE6HQ13956 83 aa9.39□□□□□ -0.91
VCL-202ENST00000372755 Q6P435 159 aa9.39□□□□□ -0.91
VCL-202ENST00000372755 NEGR1Q7Z3B1 354 aa9.39□□□□□ -0.91
VCL-202ENST00000372755 hDV102S1A0JD36 115 aa9.39□□□□□ -0.91
VCL-202ENST00000372755 A6NNC1 897 aa9.39□□□□□ -0.91
VCL-202ENST00000372755 NDUFS8O00217 210 aa9.39□□□□□ -0.91
VCL-202ENST00000372755 Q86TA4 180 aa9.39□□□□□ -0.91
VCL-202ENST00000372755 BMPERQ8N8U9 685 aa9.39□□□□□ -0.91
VCL-202ENST00000372755 MDS2Q8NDY4 140 aa9.39□□□□□ -0.91
VCL-202ENST00000372755 SHANK2-AS3Q9BTD1 123 aa9.39□□□□□ -0.91
VCL-202ENST00000372755 ESDP10768 282 aa9.38□□□□□ -0.91
VCL-202ENST00000372755 PNRC2Q9NPJ4 139 aaKnown RBP9.38□□□□□ -0.91
VCL-202ENST00000372755 SCN8AQ9UQD0 1980 aa9.38□□□□□ -0.91
VCL-202ENST00000372755 A0A087WWL8 130 aa9.38□□□□□ -0.91
VCL-202ENST00000372755 LINC00473A8K010 186 aa9.38□□□□□ -0.91
VCL-202ENST00000372755 RHODO00212 210 aa9.38□□□□□ -0.91
VCL-202ENST00000372755 Q6ZS49 121 aa9.38□□□□□ -0.91
VCL-202ENST00000372755 MRPL52Q86TS9 123 aaKnown RBP9.38□□□□□ -0.91
VCL-202ENST00000372755 DEFB104AQ8WTQ1 72 aa9.38□□□□□ -0.91
VCL-202ENST00000372755 C3orf79P0CE67 100 aa9.38□□□□□ -0.91
VCL-202ENST00000372755 GAGE2AQ6NT46 116 aa9.38□□□□□ -0.91
VCL-202ENST00000372755 SPXQ9BT56 116 aa9.38□□□□□ -0.91
VCL-202ENST00000372755 DEFB130BP0DP73 79 aa9.38□□□□□ -0.91
VCL-202ENST00000372755 DEFB130AP0DP74 79 aa9.38□□□□□ -0.91
VCL-202ENST00000372755 GATA3P23771 443 aa9.38□□□□□ -0.91
VCL-202ENST00000372755 EDA2RQ9HAV5 297 aa9.38□□□□□ -0.91
VCL-202ENST00000372755 RNASE2P10153 161 aaKnown RBP9.38□□□□□ -0.91
VCL-202ENST00000372755 ZC2HC1BQ5TFG8 222 aa9.38□□□□□ -0.91
VCL-202ENST00000372755 NAA38Q9BRA0 125 aaKnown RBP9.38□□□□□ -0.91
VCL-202ENST00000372755 CKAP5Q14008 2032 aa9.38□□□□□ -0.91
VCL-202ENST00000372755 PARP14Q460N5 1801 aa9.38□□□□□ -0.91
VCL-202ENST00000372755 GAS1P54826 345 aa9.37□□□□□ -0.91
VCL-202ENST00000372755 RBMY1FQ15415 496 aaKnown RBP9.37□□□□□ -0.91
VCL-202ENST00000372755 IGKV1D-17A0A075B6S4 117 aa9.37□□□□□ -0.91
VCL-202ENST00000372755 C3orf56Q8N813 242 aa9.37□□□□□ -0.91
VCL-202ENST00000372755 A0A087X0K7 114 aa9.37□□□□□ -0.91
VCL-202ENST00000372755 Q0VFX4 171 aa9.37□□□□□ -0.91
VCL-202ENST00000372755 IGFL4Q6B9Z1 124 aa9.37□□□□□ -0.91
VCL-202ENST00000372755 MESP1Q9BRJ9 268 aa9.37□□□□□ -0.91
VCL-202ENST00000372755 CHAC1Q9BUX1 264 aa9.37□□□□□ -0.91
VCL-202ENST00000372755 COL4A1P02462 1669 aa9.37□□□□□ -0.91
VCL-202ENST00000372755 OVOL3O00110 214 aa9.37□□□□□ -0.91
VCL-202ENST00000372755 KIR3DS1Q14943 382 aa9.37□□□□□ -0.91
VCL-202ENST00000372755 CT83Q5H943 113 aa9.37□□□□□ -0.91
VCL-202ENST00000372755 PTPRFP10586 1907 aa9.37□□□□□ -0.91
VCL-202ENST00000372755 ZNF561-AS1K7EIQ3 104 aa9.37□□□□□ -0.91
VCL-202ENST00000372755 ZNF625Q96I27 306 aaPredicted RBP9.37□□□□□ -0.91
VCL-202ENST00000372755 TMEM141Q96I45 108 aa9.37□□□□□ -0.91
VCL-202ENST00000372755 SNHG12Q9BXW3 62 aa9.37□□□□□ -0.91
VCL-202ENST00000372755 C15orf62A8K5M9 175 aa9.37□□□□□ -0.91
VCL-202ENST00000372755 COL8A2P25067 703 aa9.37□□□□□ -0.91
VCL-202ENST00000372755 C17orf82Q86X59 251 aaPredicted RBP9.37□□□□□ -0.91
VCL-202ENST00000372755 SAA4P35542 130 aa9.36□□□□□ -0.91
VCL-202ENST00000372755 SYNJ2BPP57105 145 aa9.36□□□□□ -0.91
VCL-202ENST00000372755 AMN1Q8IY45 258 aa9.36□□□□□ -0.91
VCL-202ENST00000372755 TMEM75Q8N9X5 138 aa9.36□□□□□ -0.91
VCL-202ENST00000372755 COL11A1P12107 1806 aaPredicted RBP9.36□□□□□ -0.91
VCL-202ENST00000372755 IGHG3P01860 377 aa9.36□□□□□ -0.91
VCL-202ENST00000372755 HOXD3P31249 432 aaPredicted RBP9.36□□□□□ -0.91
VCL-202ENST00000372755 DEFB131AP59861 70 aa9.36□□□□□ -0.91
VCL-202ENST00000372755 LRRC37AA6NMS7 1700 aa9.36□□□□□ -0.91
VCL-202ENST00000372755 H3BMM0 161 aa9.36□□□□□ -0.91
VCL-202ENST00000372755 PRR31Q5SQ13 230 aa9.36□□□□□ -0.91
VCL-202ENST00000372755 FAM110DQ8TAY7 271 aaPredicted RBP9.36□□□□□ -0.91
VCL-202ENST00000372755 NDUFB8O95169 186 aa9.36□□□□□ -0.91
VCL-202ENST00000372755 UNQ6494/PRO21346Q6UXR6 183 aa9.36□□□□□ -0.91
VCL-202ENST00000372755 MSRB2Q9Y3D2 182 aa9.36□□□□□ -0.91
VCL-202ENST00000372755 CLPSP04118 112 aa9.36□□□□□ -0.91
VCL-202ENST00000372755 TMEM256Q8N2U0 113 aa9.36□□□□□ -0.91
VCL-202ENST00000372755 SMKR1H3BMG3 65 aa9.35□□□□□ -0.91
VCL-202ENST00000372755 ARMS2P0C7Q2 107 aa9.35□□□□□ -0.91
VCL-202ENST00000372755 NEUROG3Q9Y4Z2 214 aa9.35□□□□□ -0.91
VCL-202ENST00000372755 LINC01619G3V211 115 aa9.35□□□□□ -0.91
VCL-202ENST00000372755 MPV17L2Q567V2 206 aa9.35□□□□□ -0.91
VCL-202ENST00000372755 ZNF492Q9P255 531 aa9.35□□□□□ -0.91
VCL-202ENST00000372755 DICER1Q9UPY3 1922 aaKnown RBP9.35□□□□□ -0.91
VCL-202ENST00000372755 LYPD2Q6UXB3 125 aa9.35□□□□□ -0.91
VCL-202ENST00000372755 BPESC1Q9GZL8 116 aa9.35□□□□□ -0.91
VCL-202ENST00000372755 TRBV25-1A0A075B6N4 114 aa9.35□□□□□ -0.91
VCL-202ENST00000372755 TMEM126AQ9H061 195 aa9.35□□□□□ -0.91
VCL-202ENST00000372755 MTCL1Q9Y4B5 1905 aaKnown RBP9.35□□□□□ -0.91
VCL-202ENST00000372755 DAD1P61803 113 aa9.35□□□□□ -0.91
VCL-202ENST00000372755 IL17RELQ6ZVW7 336 aa9.35□□□□□ -0.91
VCL-202ENST00000372755 ASXL3Q9C0F0 2248 aa9.35□□□□□ -0.91
VCL-202ENST00000372755 SOCS3O14543 225 aa9.34□□□□□ -0.91
VCL-202ENST00000372755 DLEU1O43261 78 aa9.34□□□□□ -0.91
VCL-202ENST00000372755 HEATR5BQ9P2D3 2071 aa9.34□□□□□ -0.91
VCL-202ENST00000372755 CD5LO43866 347 aa9.34□□□□□ -0.91
VCL-202ENST00000372755 Q6ZS92 163 aa9.34□□□□□ -0.91
VCL-202ENST00000372755 UBE2E1P51965 193 aa9.34□□□□□ -0.91
VCL-202ENST00000372755 PMVKQ15126 192 aa9.34□□□□□ -0.91
VCL-202ENST00000372755 NKAPP1Q8N9T2 125 aa9.34□□□□□ -0.91
VCL-202ENST00000372755 ZNF236Q9UL36 1845 aa9.34□□□□□ -0.91
VCL-202ENST00000372755 INAFM2P0DMQ5 153 aa9.34□□□□□ -0.91
VCL-202ENST00000372755 C9JAW5 83 aa9.33□□□□□ -0.92
VCL-202ENST00000372755 I3L3M4 83 aa9.33□□□□□ -0.92
VCL-202ENST00000372755 MSMBP08118 114 aa9.33□□□□□ -0.92
VCL-202ENST00000372755 QRFPP83859 136 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms