RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 NUP98P52948 1817 aa1.11□□□□□ -2.23
RNU6-28P-201ENST00000362378 TRAV5A0A0B4J249 113 aa1.11□□□□□ -2.23
RNU6-28P-201ENST00000362378 CCDC160A6NGH7 325 aa1.11□□□□□ -2.23
RNU6-28P-201ENST00000362378 B4DSR2 109 aa1.11□□□□□ -2.23
RNU6-28P-201ENST00000362378 E7EUB6 86 aa1.11□□□□□ -2.23
RNU6-28P-201ENST00000362378 C17orf112F2Z3M2 114 aa1.11□□□□□ -2.23
RNU6-28P-201ENST00000362378 PIAS1O75925 651 aa1.11□□□□□ -2.23
RNU6-28P-201ENST00000362378 GLRXP35754 106 aa1.11□□□□□ -2.23
RNU6-28P-201ENST00000362378 ARPP19P56211 112 aa1.11□□□□□ -2.23
RNU6-28P-201ENST00000362378 C1orf140Q5VVS0 124 aa1.11□□□□□ -2.23
RNU6-28P-201ENST00000362378 TEX261Q6UWH6 196 aa1.11□□□□□ -2.23
RNU6-28P-201ENST00000362378 Q8N814 137 aa1.11□□□□□ -2.23
RNU6-28P-201ENST00000362378 PPTC7Q8NI37 304 aa1.11□□□□□ -2.23
RNU6-28P-201ENST00000362378 LINC00526Q96FQ7 95 aa1.11□□□□□ -2.23
RNU6-28P-201ENST00000362378 ODF3Q96PU9 254 aa1.11□□□□□ -2.23
RNU6-28P-201ENST00000362378 MRPL57Q9BQC6 102 aaKnown RBP1.11□□□□□ -2.23
RNU6-28P-201ENST00000362378 U3KQ87 197 aa1.11□□□□□ -2.23
RNU6-28P-201ENST00000362378 KDM6AO15550 1401 aaPredicted RBP1.11□□□□□ -2.23
RNU6-28P-201ENST00000362378 DOCK4Q8N1I0 1966 aa1.1□□□□□ -2.23
RNU6-28P-201ENST00000362378 A0A087WSZ3 146 aa1.1□□□□□ -2.23
RNU6-28P-201ENST00000362378 IGKV2D-26A0A0A0MRZ7 120 aa1.1□□□□□ -2.23
RNU6-28P-201ENST00000362378 TRBV6-7A0A0A0MS04 114 aa1.1□□□□□ -2.23
RNU6-28P-201ENST00000362378 IGLV1-51P01701 117 aa1.1□□□□□ -2.23
RNU6-28P-201ENST00000362378 CXCL1P09341 107 aa1.1□□□□□ -2.23
RNU6-28P-201ENST00000362378 OR10J4P0C629 311 aa1.1□□□□□ -2.23
RNU6-28P-201ENST00000362378 LTC4SQ16873 150 aa1.1□□□□□ -2.23
RNU6-28P-201ENST00000362378 C2orf82Q6UX34 121 aa1.1□□□□□ -2.23
RNU6-28P-201ENST00000362378 C4orf22Q6V702 233 aa1.1□□□□□ -2.23
RNU6-28P-201ENST00000362378 ZNF833PQ6ZTB9 187 aa1.1□□□□□ -2.23
RNU6-28P-201ENST00000362378 STX12Q86Y82 276 aa1.1□□□□□ -2.23
RNU6-28P-201ENST00000362378 IFT20Q8IY31 132 aa1.1□□□□□ -2.23
RNU6-28P-201ENST00000362378 ST6GALNAC3Q8NDV1 305 aa1.1□□□□□ -2.23
RNU6-28P-201ENST00000362378 OR5D16Q8NGK9 328 aa1.1□□□□□ -2.23
RNU6-28P-201ENST00000362378 OBSCN-AS1Q96MR7 158 aa1.1□□□□□ -2.23
RNU6-28P-201ENST00000362378 TP53RKQ96S44 253 aa1.1□□□□□ -2.23
RNU6-28P-201ENST00000362378 PCBD2Q9H0N5 130 aa1.1□□□□□ -2.23
RNU6-28P-201ENST00000362378 CDC42SE1Q9NRR8 79 aa1.1□□□□□ -2.23
RNU6-28P-201ENST00000362378 EXPH5Q8NEV8 1989 aa1.1□□□□□ -2.23
RNU6-28P-201ENST00000362378 NISCHQ9Y2I1 1504 aa1.1□□□□□ -2.23
RNU6-28P-201ENST00000362378 CACNA1BQ00975 2339 aa1.09□□□□□ -2.23
RNU6-28P-201ENST00000362378 SCN8AQ9UQD0 1980 aa1.09□□□□□ -2.23
RNU6-28P-201ENST00000362378 ZCCHC11Q5TAX3 1644 aaKnown RBP1.09□□□□□ -2.23
RNU6-28P-201ENST00000362378 CCL16O15467 120 aa1.09□□□□□ -2.23
RNU6-28P-201ENST00000362378 FABP1P07148 127 aa1.09□□□□□ -2.23
RNU6-28P-201ENST00000362378 TMBIM6P55061 237 aa1.09□□□□□ -2.23
RNU6-28P-201ENST00000362378 MPV17LQ2QL34 196 aa1.09□□□□□ -2.23
RNU6-28P-201ENST00000362378 TMEM78Q5T7P6 136 aa1.09□□□□□ -2.23
RNU6-28P-201ENST00000362378 FKBP1CQ5VVH2 108 aa1.09□□□□□ -2.23
RNU6-28P-201ENST00000362378 KRTAP26-1Q6PEX3 210 aa1.09□□□□□ -2.23
RNU6-28P-201ENST00000362378 PHF5AQ7RTV0 110 aaKnown RBP1.09□□□□□ -2.23
RNU6-28P-201ENST00000362378 FAM19A2Q8N3H0 131 aa1.09□□□□□ -2.23
RNU6-28P-201ENST00000362378 FAM24BQ8N5W8 94 aa1.09□□□□□ -2.23
RNU6-28P-201ENST00000362378 OR5D14Q8NGL3 314 aa1.09□□□□□ -2.23
RNU6-28P-201ENST00000362378 POP5Q969H6 163 aaKnown RBP1.09□□□□□ -2.23
RNU6-28P-201ENST00000362378 CACYBPQ9HB71 228 aaKnown RBP1.09□□□□□ -2.23
RNU6-28P-201ENST00000362378 LAMTOR3Q9UHA4 124 aa1.09□□□□□ -2.23
RNU6-28P-201ENST00000362378 SMPXQ9UHP9 88 aa1.09□□□□□ -2.23
RNU6-28P-201ENST00000362378 OR52A1Q9UKL2 312 aa1.09□□□□□ -2.23
RNU6-28P-201ENST00000362378 ZFP30Q9Y2G7 519 aa1.09□□□□□ -2.23
RNU6-28P-201ENST00000362378 ASB4Q9Y574 426 aa1.09□□□□□ -2.23
RNU6-28P-201ENST00000362378 ADGBQ8N7X0 1667 aa1.09□□□□□ -2.24
RNU6-28P-201ENST00000362378 CEP192Q8TEP8 1941 aa1.09□□□□□ -2.24
RNU6-28P-201ENST00000362378 EML6Q6ZMW3 1958 aa1.08□□□□□ -2.24
RNU6-28P-201ENST00000362378 NUP210LQ5VU65 1888 aa1.08□□□□□ -2.24
RNU6-28P-201ENST00000362378 TRAV10A0A0B4J240 114 aa1.08□□□□□ -2.24
RNU6-28P-201ENST00000362378 IFNA4P05014 189 aa1.08□□□□□ -2.24
RNU6-28P-201ENST00000362378 RAB5CP51148 216 aa1.08□□□□□ -2.24
RNU6-28P-201ENST00000362378 C1orf134Q5TEV5 83 aa1.08□□□□□ -2.24
RNU6-28P-201ENST00000362378 GDF5OSQ5U4N7 250 aa1.08□□□□□ -2.24
RNU6-28P-201ENST00000362378 MUCL1Q96DR8 90 aa1.08□□□□□ -2.24
RNU6-28P-201ENST00000362378 ZNF714Q96N38 554 aa1.08□□□□□ -2.24
RNU6-28P-201ENST00000362378 KRTAP4-1Q9BYQ7 146 aa1.08□□□□□ -2.24
RNU6-28P-201ENST00000362378 CENPHQ9H3R5 247 aa1.08□□□□□ -2.24
RNU6-28P-201ENST00000362378 V9GYQ6 96 aa1.08□□□□□ -2.24
RNU6-28P-201ENST00000362378 DIDO1Q9BTC0 2240 aaKnown RBP1.08□□□□□ -2.24
RNU6-28P-201ENST00000362378 MYH2Q9UKX2 1941 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 COL6A6A6NMZ7 2263 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 TRBV6-4A0A1B0GX49 114 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 ODAMA1E959 279 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 MAP1LC3B2A6NCE7 125 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 K7ERJ3 54 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 M0R233 179 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 GPR31O00270 319 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 HIST1H2BKO60814 126 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 ERC2-IT1O76042 136 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 HIST1H2BJP06899 126 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 CDK6Q00534 326 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 KLRD1Q13241 179 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 MSMO1Q15800 293 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 RTL8BQ17RB0 113 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 FAM74A1Q5RGS3 127 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 DCUN1D2Q6PH85 259 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 OR4K15Q8NH41 348 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 CHCHD1Q96BP2 118 aaKnown RBP1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 CARD19Q96LW7 228 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 LINC00052Q96N35 136 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 OR2H1Q9GZK4 316 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 MAP1LC3BQ9GZQ8 125 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 ATPIF1Q9UII2 106 aa1.07□□□□□ -2.24
RNU6-28P-201ENST00000362378 FRMPD1Q5SYB0 1578 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms