RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 TSKUQ8WUA8 353 aa17.84■□□□□ 0.45
LDB1-201ENST00000361198 OVOL3O00110 214 aa17.83■□□□□ 0.45
LDB1-201ENST00000361198 HIST1H1EP10412 219 aaKnown RBP17.83■□□□□ 0.45
LDB1-201ENST00000361198 KRTDAPP60985 99 aa17.83■□□□□ 0.45
LDB1-201ENST00000361198 ASPHD1Q5U4P2 390 aa17.83■□□□□ 0.45
LDB1-201ENST00000361198 C18orf32Q8TCD1 76 aa17.83■□□□□ 0.45
LDB1-201ENST00000361198 DIRC3C9JPN6 131 aa17.83■□□□□ 0.44
LDB1-201ENST00000361198 GP9P14770 177 aa17.83■□□□□ 0.44
LDB1-201ENST00000361198 GNG5P63218 68 aa17.83■□□□□ 0.44
LDB1-201ENST00000361198 NDPQ00604 133 aa17.83■□□□□ 0.44
LDB1-201ENST00000361198 EBI3Q14213 229 aa17.83■□□□□ 0.44
LDB1-201ENST00000361198 ZNF562Q6V9R5 426 aa17.83■□□□□ 0.44
LDB1-201ENST00000361198 OR4B1Q8NGF8 309 aa17.83■□□□□ 0.44
LDB1-201ENST00000361198 ATG101Q9BSB4 218 aa17.83■□□□□ 0.44
LDB1-201ENST00000361198 MLST8Q9BVC4 326 aa17.83■□□□□ 0.44
LDB1-201ENST00000361198 NBEAP1P0C6P0 100 aa17.82■□□□□ 0.44
LDB1-201ENST00000361198 GDF5OSQ5U4N7 250 aa17.82■□□□□ 0.44
LDB1-201ENST00000361198 NIT1Q86X76 327 aa17.82■□□□□ 0.44
LDB1-201ENST00000361198 TMEM68Q96MH6 324 aa17.82■□□□□ 0.44
LDB1-201ENST00000361198 HIGD1AQ9Y241 93 aa17.82■□□□□ 0.44
LDB1-201ENST00000361198 GPR82Q96P67 336 aa17.82■□□□□ 0.44
LDB1-201ENST00000361198 RBM14Q96PK6 669 aaKnown RBP17.82■□□□□ 0.44
LDB1-201ENST00000361198 PGPA6NDG6 321 aa17.81■□□□□ 0.44
LDB1-201ENST00000361198 SLC25A5P05141 298 aaKnown RBP17.81■□□□□ 0.44
LDB1-201ENST00000361198 PMCHP20382 165 aa17.81■□□□□ 0.44
LDB1-201ENST00000361198 UBE2G1P62253 170 aa17.81■□□□□ 0.44
LDB1-201ENST00000361198 ARPC1AQ92747 370 aa17.81■□□□□ 0.44
LDB1-201ENST00000361198 FLNCQ14315 2725 aa17.81■□□□□ 0.44
LDB1-201ENST00000361198 OR2J3O76001 311 aa17.81■□□□□ 0.44
LDB1-201ENST00000361198 ATP5L2Q7Z4Y8 100 aa17.81■□□□□ 0.44
LDB1-201ENST00000361198 H3BTX0 84 aa17.8■□□□□ 0.44
LDB1-201ENST00000361198 IGHV4-39P01824 125 aa17.8■□□□□ 0.44
LDB1-201ENST00000361198 TMEM11P17152 192 aa17.8■□□□□ 0.44
LDB1-201ENST00000361198 CTRLP40313 264 aa17.8■□□□□ 0.44
LDB1-201ENST00000361198 UBE2E1P51965 193 aa17.8■□□□□ 0.44
LDB1-201ENST00000361198 KLF5Q13887 457 aaPredicted RBP17.8■□□□□ 0.44
LDB1-201ENST00000361198 AJUBAQ96IF1 538 aa17.8■□□□□ 0.44
LDB1-201ENST00000361198 FANCD2OSQ96PS1 177 aa17.8■□□□□ 0.44
LDB1-201ENST00000361198 SLC25A39Q9BZJ4 359 aaPredicted RBP17.8■□□□□ 0.44
LDB1-201ENST00000361198 S4R3C0 116 aa17.8■□□□□ 0.44
LDB1-201ENST00000361198 HIGD1CA8MV81 97 aa17.79■□□□□ 0.44
LDB1-201ENST00000361198 PRR27Q6MZM9 219 aa17.79■□□□□ 0.44
LDB1-201ENST00000361198 A0A1B0GXF2 115 aa17.79■□□□□ 0.44
LDB1-201ENST00000361198 VWC2LB2RUY7 222 aa17.79■□□□□ 0.44
LDB1-201ENST00000361198 C5orf17Q8NAS9 161 aa17.79■□□□□ 0.44
LDB1-201ENST00000361198 PRSS22Q9GZN4 317 aa17.79■□□□□ 0.44
LDB1-201ENST00000361198 TMEM8BA6NDV4 472 aa17.78■□□□□ 0.44
LDB1-201ENST00000361198 NPIPB5A8MRT5 1133 aa17.78■□□□□ 0.44
LDB1-201ENST00000361198 C3orf79P0CE67 100 aa17.78■□□□□ 0.44
LDB1-201ENST00000361198 ZFHX3Q15911 3703 aa17.78■□□□□ 0.44
LDB1-201ENST00000361198 IGLV11-55A0A075B6I3 123 aa17.78■□□□□ 0.44
LDB1-201ENST00000361198 TOMM40O96008 361 aa17.78■□□□□ 0.44
LDB1-201ENST00000361198 FAM120AOSQ5T036 256 aa17.78■□□□□ 0.44
LDB1-201ENST00000361198 LPAR2Q9HBW0 351 aa17.78■□□□□ 0.44
LDB1-201ENST00000361198 CACNA1BQ00975 2339 aa17.78■□□□□ 0.44
LDB1-201ENST00000361198 FAM19A2Q8N3H0 131 aa17.77■□□□□ 0.44
LDB1-201ENST00000361198 FMC1Q96HJ9 113 aa17.77■□□□□ 0.44
LDB1-201ENST00000361198 LTAP01374 205 aa17.77■□□□□ 0.43
LDB1-201ENST00000361198 CT83Q5H943 113 aa17.77■□□□□ 0.43
LDB1-201ENST00000361198 TTC9CQ8N5M4 171 aa17.77■□□□□ 0.43
LDB1-201ENST00000361198 SGK494Q96LW2 274 aa17.77■□□□□ 0.43
LDB1-201ENST00000361198 ALKBH7Q9BT30 221 aaPredicted RBP17.77■□□□□ 0.43
LDB1-201ENST00000361198 USP9XQ93008 2570 aaPredicted RBP17.76■□□□□ 0.43
LDB1-201ENST00000361198 SAA4P35542 130 aa17.76■□□□□ 0.43
LDB1-201ENST00000361198 DOPEY1Q5JWR5 2465 aa17.76■□□□□ 0.43
LDB1-201ENST00000361198 ABCA2Q9BZC7 2435 aa17.76■□□□□ 0.43
LDB1-201ENST00000361198 Q8N9W7 124 aa17.75■□□□□ 0.43
LDB1-201ENST00000361198 Q9H3A6 140 aa17.75■□□□□ 0.43
LDB1-201ENST00000361198 ZNF492Q9P255 531 aa17.75■□□□□ 0.43
LDB1-201ENST00000361198 RPH3ALQ9UNE2 315 aa17.75■□□□□ 0.43
LDB1-201ENST00000361198 SPG11Q96JI7 2443 aa17.75■□□□□ 0.43
LDB1-201ENST00000361198 IGHV7-81A0A0B4J1V7 117 aa17.75■□□□□ 0.43
LDB1-201ENST00000361198 C19orf71A6NCJ1 209 aa17.75■□□□□ 0.43
LDB1-201ENST00000361198 TCRAP04437 139 aa17.75■□□□□ 0.43
LDB1-201ENST00000361198 FAM106CPP0CH98 169 aa17.75■□□□□ 0.43
LDB1-201ENST00000361198 LINC00322Q6ZN03 302 aaPredicted RBP17.75■□□□□ 0.43
LDB1-201ENST00000361198 ZNF491Q8N8L2 437 aa17.75■□□□□ 0.43
LDB1-201ENST00000361198 RPP21Q9H633 154 aaKnown RBP17.75■□□□□ 0.43
LDB1-201ENST00000361198 EGR2P11161 476 aaPredicted RBP17.74■□□□□ 0.43
LDB1-201ENST00000361198 TMEM14CQ9P0S9 112 aa17.74■□□□□ 0.43
LDB1-201ENST00000361198 GNG7O60262 68 aa17.73■□□□□ 0.43
LDB1-201ENST00000361198 IL4P05112 153 aa17.73■□□□□ 0.43
LDB1-201ENST00000361198 RPLP1P05386 114 aaKnown RBP17.73■□□□□ 0.43
LDB1-201ENST00000361198 PIP4P2Q8N4L2 257 aa17.73■□□□□ 0.43
LDB1-201ENST00000361198 BORCS7Q96B45 105 aa17.73■□□□□ 0.43
LDB1-201ENST00000361198 RNF125Q96EQ8 232 aa17.73■□□□□ 0.43
LDB1-201ENST00000361198 A8MWL6 223 aa17.73■□□□□ 0.43
LDB1-201ENST00000361198 F8W735 103 aaPredicted RBP17.73■□□□□ 0.43
LDB1-201ENST00000361198 NTF3P20783 257 aa17.73■□□□□ 0.43
LDB1-201ENST00000361198 SPATA45Q537H7 98 aa17.73■□□□□ 0.43
LDB1-201ENST00000361198 SOX21Q9Y651 276 aaPredicted RBP17.73■□□□□ 0.43
LDB1-201ENST00000361198 CAMPP49913 170 aa17.72■□□□□ 0.43
LDB1-201ENST00000361198 SHANK2-AS3Q9BTD1 123 aa17.72■□□□□ 0.43
LDB1-201ENST00000361198 SSBP4Q9BWG4 385 aaPredicted RBP17.72■□□□□ 0.43
LDB1-201ENST00000361198 HSBP1O75506 76 aa17.72■□□□□ 0.43
LDB1-201ENST00000361198 MFAP4P55083 255 aa17.72■□□□□ 0.43
LDB1-201ENST00000361198 HBBP68871 147 aa17.72■□□□□ 0.43
LDB1-201ENST00000361198 GFRA4Q9GZZ7 299 aa17.72■□□□□ 0.43
LDB1-201ENST00000361198 C1RLQ9NZP8 487 aa17.72■□□□□ 0.43
LDB1-201ENST00000361198 H3BRN7 92 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms