RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 COPS9Q8WXC6 57 aa15.18■□□□□ 0.02
UBE3C-201ENST00000348165 NDUFA3O95167 84 aa15.18■□□□□ 0.02
UBE3C-201ENST00000348165 YLPM1P49750 1951 aaKnown RBP15.18■□□□□ 0.02
UBE3C-201ENST00000348165 IGKV3D-20A0A0C4DH25 116 aa15.18■□□□□ 0.02
UBE3C-201ENST00000348165 GZMBP10144 247 aa15.18■□□□□ 0.02
UBE3C-201ENST00000348165 SAA4P35542 130 aa15.18■□□□□ 0.02
UBE3C-201ENST00000348165 Q6ZRM9 215 aa15.18■□□□□ 0.02
UBE3C-201ENST00000348165 MAPK1IP1LQ8NDC0 245 aa15.18■□□□□ 0.02
UBE3C-201ENST00000348165 NHP2Q9NX24 153 aaKnown RBP15.18■□□□□ 0.02
UBE3C-201ENST00000348165 ETV2O00321 342 aaPredicted RBP15.17■□□□□ 0.02
UBE3C-201ENST00000348165 NTF4P34130 210 aa15.17■□□□□ 0.02
UBE3C-201ENST00000348165 AGMATQ9BSE5 352 aa15.17■□□□□ 0.02
UBE3C-201ENST00000348165 ST20Q9HBF5 79 aa15.17■□□□□ 0.02
UBE3C-201ENST00000348165 OVOL1O14753 267 aa15.16■□□□□ 0.02
UBE3C-201ENST00000348165 ASCL4Q6XD76 172 aa15.16■□□□□ 0.02
UBE3C-201ENST00000348165 DTX1Q86Y01 620 aa15.16■□□□□ 0.02
UBE3C-201ENST00000348165 SP5Q6BEB4 398 aaPredicted RBP15.16■□□□□ 0.02
UBE3C-201ENST00000348165 NCOR1P1Q9H4R4 102 aa15.16■□□□□ 0.02
UBE3C-201ENST00000348165 EVI2AP22794 236 aa15.16■□□□□ 0.02
UBE3C-201ENST00000348165 PRTN3P24158 256 aa15.16■□□□□ 0.02
UBE3C-201ENST00000348165 PRR31Q5SQ13 230 aa15.16■□□□□ 0.02
UBE3C-201ENST00000348165 PTPRDP23468 1912 aa15.16■□□□□ 0.02
UBE3C-201ENST00000348165 TRGV4A0A0C4DH28 118 aa15.16■□□□□ 0.02
UBE3C-201ENST00000348165 CYSLTR1Q9Y271 337 aa15.16■□□□□ 0.02
UBE3C-201ENST00000348165 TICRRQ7Z2Z1 1910 aa15.15■□□□□ 0.02
UBE3C-201ENST00000348165 APOMO95445 188 aa15.15■□□□□ 0.02
UBE3C-201ENST00000348165 PIP4P2Q8N4L2 257 aa15.15■□□□□ 0.02
UBE3C-201ENST00000348165 TRGV9Q99603 122 aa15.15■□□□□ 0.02
UBE3C-201ENST00000348165 RNF223E7ERA6 249 aa15.15■□□□□ 0.02
UBE3C-201ENST00000348165 TDGF1P13385 188 aa15.15■□□□□ 0.02
UBE3C-201ENST00000348165 IGFL3Q6UXB1 125 aa15.15■□□□□ 0.02
UBE3C-201ENST00000348165 GTSF1LQ9H1H1 148 aa15.15■□□□□ 0.02
UBE3C-201ENST00000348165 IGFL4Q6B9Z1 124 aa15.14■□□□□ 0.01
UBE3C-201ENST00000348165 TMEM155Q4W5P6 130 aa15.14■□□□□ 0.01
UBE3C-201ENST00000348165 TSKUQ8WUA8 353 aa15.14■□□□□ 0.01
UBE3C-201ENST00000348165 GBF1Q92538 1859 aa15.14■□□□□ 0.01
UBE3C-201ENST00000348165 IGKV1-6A0A0C4DH72 117 aa15.14■□□□□ 0.01
UBE3C-201ENST00000348165 SPSB3Q6PJ21 355 aa15.14■□□□□ 0.01
UBE3C-201ENST00000348165 Q6ZR03 302 aa15.14■□□□□ 0.01
UBE3C-201ENST00000348165 C15orf62A8K5M9 175 aa15.14■□□□□ 0.01
UBE3C-201ENST00000348165 A8MWP6 167 aa15.14■□□□□ 0.01
UBE3C-201ENST00000348165 H3BRM9 83 aa15.14■□□□□ 0.01
UBE3C-201ENST00000348165 GTSCR1Q86UQ5 136 aa15.14■□□□□ 0.01
UBE3C-201ENST00000348165 SSC4DQ8WTU2 575 aa15.14■□□□□ 0.01
UBE3C-201ENST00000348165 DNAL4O96015 105 aa15.13■□□□□ 0.01
UBE3C-201ENST00000348165 IGHV2-70P01814 119 aa15.13■□□□□ 0.01
UBE3C-201ENST00000348165 Q6ZS49 121 aa15.13■□□□□ 0.01
UBE3C-201ENST00000348165 MGAMO43451 1857 aa15.13■□□□□ 0.01
UBE3C-201ENST00000348165 SLC25A16P16260 332 aa15.13■□□□□ 0.01
UBE3C-201ENST00000348165 IFI27P40305 119 aaPredicted RBP15.13■□□□□ 0.01
UBE3C-201ENST00000348165 ZNF503-AS2A6NEH8 195 aa15.12■□□□□ 0.01
UBE3C-201ENST00000348165 ESDP10768 282 aa15.12■□□□□ 0.01
UBE3C-201ENST00000348165 RUSC1-AS1Q66K80 236 aa15.12■□□□□ 0.01
UBE3C-201ENST00000348165 Q8TAT8 98 aa15.12■□□□□ 0.01
UBE3C-201ENST00000348165 TCRAP04437 139 aa15.12■□□□□ 0.01
UBE3C-201ENST00000348165 SAMD5Q5TGI4 173 aa15.12■□□□□ 0.01
UBE3C-201ENST00000348165 MRPS16Q9Y3D3 137 aaKnown RBP15.12■□□□□ 0.01
UBE3C-201ENST00000348165 SRRM4A7MD48 611 aaKnown RBP15.11■□□□□ 0.01
UBE3C-201ENST00000348165 ZFAND6Q6FIF0 208 aa15.11■□□□□ 0.01
UBE3C-201ENST00000348165 LCNL1Q6ZST4 164 aa15.11■□□□□ 0.01
UBE3C-201ENST00000348165 TRGV11A0A075B6L2 103 aa15.11■□□□□ 0.01
UBE3C-201ENST00000348165 TRAV8-1A0A0A6YYK1 113 aa15.11■□□□□ 0.01
UBE3C-201ENST00000348165 FCN3O75636 299 aa15.11■□□□□ 0.01
UBE3C-201ENST00000348165 RNASE2P10153 161 aaKnown RBP15.11■□□□□ 0.01
UBE3C-201ENST00000348165 LINC01356Q8N9X3 169 aa15.11■□□□□ 0.01
UBE3C-201ENST00000348165 HSD52Q0P140 79 aa15.11■□□□□ 0.01
UBE3C-201ENST00000348165 GAGE2BQ13066 116 aa15.11■□□□□ 0.01
UBE3C-201ENST00000348165 GAGE13Q4V321 117 aa15.11■□□□□ 0.01
UBE3C-201ENST00000348165 GAGE2EQ4V326 116 aa15.11■□□□□ 0.01
UBE3C-201ENST00000348165 GAGE2DQ9UEU5 116 aa15.11■□□□□ 0.01
UBE3C-201ENST00000348165 CEACAM8P31997 349 aaPredicted RBP15.11■□□□□ 0.01
UBE3C-201ENST00000348165 TMEM95Q3KNT9 176 aa15.11■□□□□ 0.01
UBE3C-201ENST00000348165 DEFB104AQ8WTQ1 72 aa15.1■□□□□ 0.01
UBE3C-201ENST00000348165 ZNF479Q96JC4 524 aa15.1■□□□□ 0.01
UBE3C-201ENST00000348165 TRAV1-1A0A0B4J248 108 aa15.1■□□□□ 0.01
UBE3C-201ENST00000348165 PPBPP02775 128 aa15.1■□□□□ 0.01
UBE3C-201ENST00000348165 SRSF1Q07955 248 aaKnown RBP eCLIP15.1■□□□□ 0.017e-10■■□□□ 13.8
UBE3C-201ENST00000348165 DUX4L9Q6RFH8 374 aaPredicted RBP15.1■□□□□ 0.01
UBE3C-201ENST00000348165 KLHL30-AS1Q8NEE0 82 aa15.1■□□□□ 0.01
UBE3C-201ENST00000348165 GNB1LQ9BYB4 327 aa15.1■□□□□ 0.01
UBE3C-201ENST00000348165 TRBV7-1A0A0A6YYK4 115 aa15.1■□□□□ 0.01
UBE3C-201ENST00000348165 HBDP02042 147 aa15.1■□□□□ 0.01
UBE3C-201ENST00000348165 F2Z2F3 143 aa15.1■□□□□ 0.01
UBE3C-201ENST00000348165 CACNG7P62955 275 aa15.1■□□□□ 0.01
UBE3C-201ENST00000348165 GAGE12BA1L429 117 aa15.09■□□□□ 0.01
UBE3C-201ENST00000348165 LINC01551Q86U37 167 aa15.09■□□□□ 0.01
UBE3C-201ENST00000348165 NXT2Q9NPJ8 142 aaKnown RBP15.09■□□□□ 0.01
UBE3C-201ENST00000348165 MSMBP08118 114 aa15.09■□□□□ 0.01
UBE3C-201ENST00000348165 ERVK11-1P61568 191 aa15.09■□□□□ 0.01
UBE3C-201ENST00000348165 A0A1B0GW64 132 aa15.09■□□□□ 0.01
UBE3C-201ENST00000348165 ADCYAP1P18509 176 aa15.09■□□□□ 0.01
UBE3C-201ENST00000348165 ACTL10Q5JWF8 245 aa15.09■□□□□ 0.01
UBE3C-201ENST00000348165 CNTFRP26992 372 aa15.09■□□□□ 0.01
UBE3C-201ENST00000348165 FXYD7P58549 80 aa15.09■□□□□ 0.01
UBE3C-201ENST00000348165 A0A1W2PPI3 338 aa15.08■□□□□ 0.01
UBE3C-201ENST00000348165 NCR2O95944 276 aa15.08■□□□□ 0.01
UBE3C-201ENST00000348165 CFAP161Q6P656 301 aa15.08■□□□□ 0.01
UBE3C-201ENST00000348165 TRAV12-3A0A0B4J271 114 aa15.08■□□□□ 0
UBE3C-201ENST00000348165 OVOL3O00110 214 aa15.08■□□□□ 0
UBE3C-201ENST00000348165 ZNF138P52744 262 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms