RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 CLUHP3Q96NS8 147 aa12.5□□□□□ -0.41
LRP8-202ENST00000347547 J3QR89 54 aa12.5□□□□□ -0.41
LRP8-202ENST00000347547 HBDP02042 147 aa12.5□□□□□ -0.41
LRP8-202ENST00000347547 SMAGPQ0VAQ4 97 aa12.5□□□□□ -0.41
LRP8-202ENST00000347547 PCP2Q8IVA1 136 aa12.5□□□□□ -0.41
LRP8-202ENST00000347547 MDS2Q8NDY4 140 aa12.5□□□□□ -0.41
LRP8-202ENST00000347547 SHISA9B4DS77 424 aa12.49□□□□□ -0.41
LRP8-202ENST00000347547 TM4SF5O14894 197 aa12.49□□□□□ -0.41
LRP8-202ENST00000347547 FCGR2BP31994 310 aaPredicted RBP12.49□□□□□ -0.41
LRP8-202ENST00000347547 PHLDA1Q8WV24 401 aaPredicted RBP12.49□□□□□ -0.41
LRP8-202ENST00000347547 SRSF12Q8WXF0 261 aaKnown RBP12.49□□□□□ -0.41
LRP8-202ENST00000347547 MED13Q9UHV7 2174 aa12.49□□□□□ -0.41
LRP8-202ENST00000347547 TRGV5A0A0B4J1U4 118 aa12.49□□□□□ -0.41
LRP8-202ENST00000347547 A0A1W2PNU3 283 aaPredicted RBP12.49□□□□□ -0.41
LRP8-202ENST00000347547 F8W1H4 67 aa12.49□□□□□ -0.41
LRP8-202ENST00000347547 SPANXB1Q9NS25 103 aaPredicted RBP12.49□□□□□ -0.41
LRP8-202ENST00000347547 TMEM14CQ9P0S9 112 aa12.49□□□□□ -0.41
LRP8-202ENST00000347547 TSSC4Q9Y5U2 329 aaPredicted RBP12.49□□□□□ -0.41
LRP8-202ENST00000347547 hADV38S2A0JD32 116 aa12.48□□□□□ -0.41
LRP8-202ENST00000347547 C8orf46Q8TAG6 207 aa12.48□□□□□ -0.41
LRP8-202ENST00000347547 IFI27L1Q96BM0 104 aa12.48□□□□□ -0.41
LRP8-202ENST00000347547 SPRY4Q9C004 299 aa12.48□□□□□ -0.41
LRP8-202ENST00000347547 DEFB127Q9H1M4 99 aa12.48□□□□□ -0.41
LRP8-202ENST00000347547 OTOGLQ3ZCN5 2332 aa12.48□□□□□ -0.41
LRP8-202ENST00000347547 TRAV8-1A0A0A6YYK1 113 aa12.48□□□□□ -0.41
LRP8-202ENST00000347547 NKX2-8O15522 239 aa12.48□□□□□ -0.41
LRP8-202ENST00000347547 DHRS13Q6UX07 377 aa12.48□□□□□ -0.41
LRP8-202ENST00000347547 PRNTQ86SH4 94 aa12.48□□□□□ -0.41
LRP8-202ENST00000347547 MRPL20Q9BYC9 149 aaKnown RBP12.48□□□□□ -0.41
LRP8-202ENST00000347547 TNCP24821 2201 aa12.47□□□□□ -0.41
LRP8-202ENST00000347547 DYSFO75923 2080 aa12.47□□□□□ -0.41
LRP8-202ENST00000347547 PCNX2A6NKB5 2137 aa12.47□□□□□ -0.41
LRP8-202ENST00000347547 IGHV3-48P01763 117 aa12.47□□□□□ -0.41
LRP8-202ENST00000347547 NMUP48645 174 aa12.47□□□□□ -0.41
LRP8-202ENST00000347547 TCTEX1D4Q5JR98 221 aa12.47□□□□□ -0.41
LRP8-202ENST00000347547 MOGAT3Q86VF5 341 aa12.47□□□□□ -0.41
LRP8-202ENST00000347547 VSTM5A8MXK1 200 aa12.47□□□□□ -0.41
LRP8-202ENST00000347547 ZNF207O43670 478 aaKnown RBP12.47□□□□□ -0.41
LRP8-202ENST00000347547 FXYD2P54710 66 aa12.47□□□□□ -0.41
LRP8-202ENST00000347547 TMEM75Q8N9X5 138 aa12.47□□□□□ -0.41
LRP8-202ENST00000347547 RND1Q92730 232 aa12.47□□□□□ -0.41
LRP8-202ENST00000347547 FLYWCH2Q96CP2 140 aaKnown RBP12.47□□□□□ -0.41
LRP8-202ENST00000347547 PRELID3AQ96N28 172 aa12.47□□□□□ -0.41
LRP8-202ENST00000347547 D6R8Y8 96 aa12.46□□□□□ -0.41
LRP8-202ENST00000347547 THBDP07204 575 aa12.46□□□□□ -0.41
LRP8-202ENST00000347547 FAM104BQ5XKR9 115 aa12.46□□□□□ -0.41
LRP8-202ENST00000347547 GOLT1AQ6ZVE7 132 aa12.46□□□□□ -0.41
LRP8-202ENST00000347547 BCL6BQ8N143 479 aaPredicted RBP12.46□□□□□ -0.41
LRP8-202ENST00000347547 DKK4Q9UBT3 224 aa12.46□□□□□ -0.41
LRP8-202ENST00000347547 E9PLD3 99 aa12.45□□□□□ -0.42
LRP8-202ENST00000347547 KIR2DL2P43627 348 aaPredicted RBP12.45□□□□□ -0.42
LRP8-202ENST00000347547 ORMDL3Q8N138 153 aa12.45□□□□□ -0.42
LRP8-202ENST00000347547 TM2D2Q9BX73 214 aa12.45□□□□□ -0.42
LRP8-202ENST00000347547 IGHV1-18A0A0C4DH31 117 aa12.45□□□□□ -0.42
LRP8-202ENST00000347547 NDUFS7O75251 213 aa12.45□□□□□ -0.42
LRP8-202ENST00000347547 SPRNQ5BIV9 151 aa12.45□□□□□ -0.42
LRP8-202ENST00000347547 C10orf55Q5SWW7 151 aa12.45□□□□□ -0.42
LRP8-202ENST00000347547 CCDC144NLQ6NUI1 221 aa12.45□□□□□ -0.42
LRP8-202ENST00000347547 RITA1Q96K30 269 aa12.45□□□□□ -0.42
LRP8-202ENST00000347547 ZMAT4Q9H898 229 aa12.45□□□□□ -0.42
LRP8-202ENST00000347547 DSCAML1Q8TD84 2053 aa12.45□□□□□ -0.42
LRP8-202ENST00000347547 H3BTX0 84 aa12.44□□□□□ -0.42
LRP8-202ENST00000347547 HLA-DRB4P13762 266 aa12.44□□□□□ -0.42
LRP8-202ENST00000347547 GCSHP23434 173 aa12.44□□□□□ -0.42
LRP8-202ENST00000347547 SRSF1Q07955 248 aaKnown RBP eCLIP12.44□□□□□ -0.421e-6■■□□□ 11.9
LRP8-202ENST00000347547 OR4C13Q8NGP0 309 aa12.44□□□□□ -0.42
LRP8-202ENST00000347547 C18orf15Q96N68 181 aa12.44□□□□□ -0.42
LRP8-202ENST00000347547 GAFA1Q96PS6 74 aa12.44□□□□□ -0.42
LRP8-202ENST00000347547 ZNRD1Q9P1U0 126 aa12.44□□□□□ -0.42
LRP8-202ENST00000347547 SH3BGRL2Q9UJC5 107 aa12.44□□□□□ -0.42
LRP8-202ENST00000347547 F11RQ9Y624 299 aaKnown RBP12.44□□□□□ -0.42
LRP8-202ENST00000347547 HLA-DRB4X5D2U9 266 aa12.44□□□□□ -0.42
LRP8-202ENST00000347547 LOC389332A0A1B0GUA5 103 aa12.44□□□□□ -0.42
LRP8-202ENST00000347547 A0A1W2PRD5 423 aa12.44□□□□□ -0.42
LRP8-202ENST00000347547 A0A1W2PRF3 423 aa12.44□□□□□ -0.42
LRP8-202ENST00000347547 A0A1W2PRM7 423 aa12.44□□□□□ -0.42
LRP8-202ENST00000347547 GATA4P43694 442 aa12.44□□□□□ -0.42
LRP8-202ENST00000347547 MSMPQ1L6U9 139 aa12.44□□□□□ -0.42
LRP8-202ENST00000347547 HES3Q5TGS1 186 aa12.44□□□□□ -0.42
LRP8-202ENST00000347547 DUX4L9Q6RFH8 374 aaPredicted RBP12.44□□□□□ -0.42
LRP8-202ENST00000347547 Q71RC1 249 aaPredicted RBP12.44□□□□□ -0.42
LRP8-202ENST00000347547 CHAC1Q9BUX1 264 aa12.44□□□□□ -0.42
LRP8-202ENST00000347547 HIGD1AQ9Y241 93 aa12.44□□□□□ -0.42
LRP8-202ENST00000347547 URB1O60287 2271 aaKnown RBP12.44□□□□□ -0.42
LRP8-202ENST00000347547 IGLV2-23P01705 113 aa12.43□□□□□ -0.42
LRP8-202ENST00000347547 RUSC1-AS1Q66K80 236 aa12.43□□□□□ -0.42
LRP8-202ENST00000347547 FAM169BQ8N8A8 192 aa12.43□□□□□ -0.42
LRP8-202ENST00000347547 ZNF71Q9NQZ8 489 aaPredicted RBP12.43□□□□□ -0.42
LRP8-202ENST00000347547 A0A1W2PPI3 338 aa12.43□□□□□ -0.42
LRP8-202ENST00000347547 WI2-2373I1.2A0A1W2PRP0 233 aa12.43□□□□□ -0.42
LRP8-202ENST00000347547 PRSS47A8MTI9 375 aa12.43□□□□□ -0.42
LRP8-202ENST00000347547 SCGB2A2Q13296 93 aa12.43□□□□□ -0.42
LRP8-202ENST00000347547 LINC01546A6NGU7 62 aa12.42□□□□□ -0.42
LRP8-202ENST00000347547 FBLL1A6NHQ2 334 aaKnown RBP12.42□□□□□ -0.42
LRP8-202ENST00000347547 RAB9AP51151 201 aa12.42□□□□□ -0.42
LRP8-202ENST00000347547 DKK2Q9UBU2 259 aa12.42□□□□□ -0.42
LRP8-202ENST00000347547 TANC2Q9HCD6 1990 aa12.42□□□□□ -0.42
LRP8-202ENST00000347547 CRIP1P50238 77 aa12.42□□□□□ -0.42
LRP8-202ENST00000347547 TCTAP57738 103 aa12.42□□□□□ -0.42
LRP8-202ENST00000347547 WFDC2Q14508 124 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms