RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 Q71RC1 249 aaPredicted RBP10.49□□□□□ -0.73
CDC42-202ENST00000344548 C15orf54Q8N8G6 183 aa10.49□□□□□ -0.73
CDC42-202ENST00000344548 STXBP6Q8NFX7 210 aa10.49□□□□□ -0.73
CDC42-202ENST00000344548 FOXC2Q99958 501 aa10.49□□□□□ -0.73
CDC42-202ENST00000344548 IGHV3OR16-13A0A075B7E8 117 aa10.48□□□□□ -0.73
CDC42-202ENST00000344548 TGIF2-C20orf24A0A0A6YYL0 155 aa10.48□□□□□ -0.73
CDC42-202ENST00000344548 IGHV3-74A0A0B4J1X5 117 aa10.48□□□□□ -0.73
CDC42-202ENST00000344548 HELTA6NFD8 242 aa10.48□□□□□ -0.73
CDC42-202ENST00000344548 IGLV2-8P01709 118 aa10.48□□□□□ -0.73
CDC42-202ENST00000344548 APOHP02749 345 aaPredicted RBP10.48□□□□□ -0.73
CDC42-202ENST00000344548 PF4V1P10720 104 aa10.48□□□□□ -0.73
CDC42-202ENST00000344548 OR5I1Q13606 314 aa10.48□□□□□ -0.73
CDC42-202ENST00000344548 CENPWQ5EE01 88 aa10.48□□□□□ -0.73
CDC42-202ENST00000344548 SIGLECL1Q8N7X8 197 aa10.48□□□□□ -0.73
CDC42-202ENST00000344548 Q9H3A6 140 aa10.48□□□□□ -0.73
CDC42-202ENST00000344548 PRDM13Q9H4Q3 707 aa10.48□□□□□ -0.73
CDC42-202ENST00000344548 TMEM14CQ9P0S9 112 aa10.48□□□□□ -0.73
CDC42-202ENST00000344548 IGHV3-49A0A0A0MS15 119 aa10.47□□□□□ -0.73
CDC42-202ENST00000344548 IGHV3-66A0A0C4DH42 116 aa10.47□□□□□ -0.73
CDC42-202ENST00000344548 ZNF207O43670 478 aaKnown RBP10.47□□□□□ -0.73
CDC42-202ENST00000344548 NHLRC2Q8NBF2 726 aa10.47□□□□□ -0.73
CDC42-202ENST00000344548 RPH3ALQ9UNE2 315 aa10.47□□□□□ -0.73
CDC42-202ENST00000344548 SMAD5-AS1Q9Y6J3 95 aa10.47□□□□□ -0.73
CDC42-202ENST00000344548 TRBV7-1A0A0A6YYK4 115 aa10.47□□□□□ -0.73
CDC42-202ENST00000344548 ISLRO14498 428 aa10.47□□□□□ -0.73
CDC42-202ENST00000344548 HIST1H1EP10412 219 aaKnown RBP10.47□□□□□ -0.73
CDC42-202ENST00000344548 OR5R1Q8NH85 324 aa10.47□□□□□ -0.73
CDC42-202ENST00000344548 SMR3AQ99954 134 aa10.47□□□□□ -0.73
CDC42-202ENST00000344548 OTOGQ6ZRI0 2925 aa10.47□□□□□ -0.73
CDC42-202ENST00000344548 TRBV19A0A075B6N1 114 aa10.46□□□□□ -0.73
CDC42-202ENST00000344548 FAM223BA6NKX1 122 aa10.46□□□□□ -0.73
CDC42-202ENST00000344548 PEX7O00628 323 aa10.46□□□□□ -0.73
CDC42-202ENST00000344548 BPIFA4PQ86YQ2 179 aa10.46□□□□□ -0.73
CDC42-202ENST00000344548 FAM223AQ8IWN6 122 aa10.46□□□□□ -0.73
CDC42-202ENST00000344548 IGF2BP2-AS1Q96M15 143 aa10.46□□□□□ -0.73
CDC42-202ENST00000344548 EPDR1Q9UM22 224 aa10.46□□□□□ -0.73
CDC42-202ENST00000344548 CLDN34H7C241 214 aa10.46□□□□□ -0.74
CDC42-202ENST00000344548 SLC25A5P05141 298 aaKnown RBP10.46□□□□□ -0.74
CDC42-202ENST00000344548 RAB9AP51151 201 aa10.46□□□□□ -0.74
CDC42-202ENST00000344548 UNQ9165/PRO28630Q6UXU0 137 aa10.46□□□□□ -0.74
CDC42-202ENST00000344548 OR5B12Q96R08 314 aa10.46□□□□□ -0.74
CDC42-202ENST00000344548 ZNF702PQ9H963 129 aa10.46□□□□□ -0.74
CDC42-202ENST00000344548 C9JCJ5 164 aa10.45□□□□□ -0.74
CDC42-202ENST00000344548 SIGLEC15Q6ZMC9 328 aa10.45□□□□□ -0.74
CDC42-202ENST00000344548 ZFP82Q8N141 532 aa10.45□□□□□ -0.74
CDC42-202ENST00000344548 TMEM242Q9NWH2 141 aa10.45□□□□□ -0.74
CDC42-202ENST00000344548 M0R3E3 92 aa10.45□□□□□ -0.74
CDC42-202ENST00000344548 MT-ND4LP03901 98 aa10.45□□□□□ -0.74
CDC42-202ENST00000344548 PFN1P07737 140 aaKnown RBP10.45□□□□□ -0.74
CDC42-202ENST00000344548 RAB5AP20339 215 aa10.45□□□□□ -0.74
CDC42-202ENST00000344548 TEX38Q6PEX7 206 aa10.45□□□□□ -0.74
CDC42-202ENST00000344548 ASCL2Q99929 193 aa10.45□□□□□ -0.74
CDC42-202ENST00000344548 RABAC1Q9UI14 185 aa10.45□□□□□ -0.74
CDC42-202ENST00000344548 TRAV8-1A0A0A6YYK1 113 aa10.44□□□□□ -0.74
CDC42-202ENST00000344548 LOC105371267A0A1B0GV96 52 aa10.44□□□□□ -0.74
CDC42-202ENST00000344548 PSMB8P28062 276 aa10.44□□□□□ -0.74
CDC42-202ENST00000344548 GNG4P50150 75 aa10.44□□□□□ -0.74
CDC42-202ENST00000344548 IGFL4Q6B9Z1 124 aa10.44□□□□□ -0.74
CDC42-202ENST00000344548 SFRP2Q96HF1 295 aa10.44□□□□□ -0.74
CDC42-202ENST00000344548 CXorf65A6NEN9 183 aa10.44□□□□□ -0.74
CDC42-202ENST00000344548 H7BYZ3 331 aa10.44□□□□□ -0.74
CDC42-202ENST00000344548 BMPR1BO00238 502 aa10.44□□□□□ -0.74
CDC42-202ENST00000344548 BUB3O43684 328 aa10.44□□□□□ -0.74
CDC42-202ENST00000344548 BRI3O95415 125 aa10.44□□□□□ -0.74
CDC42-202ENST00000344548 ARL3P36405 182 aa10.44□□□□□ -0.74
CDC42-202ENST00000344548 HIST2H2BDQ6DRA6 164 aa10.44□□□□□ -0.74
CDC42-202ENST00000344548 OR4F17Q8NGA8 305 aa10.44□□□□□ -0.74
CDC42-202ENST00000344548 OR4X2Q8NGF9 303 aa10.44□□□□□ -0.74
CDC42-202ENST00000344548 IGHG4P01861 327 aa10.43□□□□□ -0.74
CDC42-202ENST00000344548 TCRAP04437 139 aa10.43□□□□□ -0.74
CDC42-202ENST00000344548 HLA-DMBP28068 263 aa10.43□□□□□ -0.74
CDC42-202ENST00000344548 FAM3BP58499 235 aaPredicted RBP10.43□□□□□ -0.74
CDC42-202ENST00000344548 OR8I2Q8N0Y5 310 aa10.43□□□□□ -0.74
CDC42-202ENST00000344548 CTDSP1Q9GZU7 261 aa10.43□□□□□ -0.74
CDC42-202ENST00000344548 RNASE7Q9H1E1 156 aaKnown RBP10.43□□□□□ -0.74
CDC42-202ENST00000344548 H3BUA1 57 aa10.42□□□□□ -0.74
CDC42-202ENST00000344548 RPLP1P05386 114 aaKnown RBP10.42□□□□□ -0.74
CDC42-202ENST00000344548 C1QL4Q86Z23 238 aa10.42□□□□□ -0.74
CDC42-202ENST00000344548 C5orf17Q8NAS9 161 aa10.42□□□□□ -0.74
CDC42-202ENST00000344548 ESM1Q9NQ30 184 aa10.42□□□□□ -0.74
CDC42-202ENST00000344548 YAE1D1Q9NRH1 226 aa10.42□□□□□ -0.74
CDC42-202ENST00000344548 CDC42EP3Q9UKI2 254 aa10.42□□□□□ -0.74
CDC42-202ENST00000344548 SELENOKQ9Y6D0 94 aa10.42□□□□□ -0.74
CDC42-202ENST00000344548 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.42□□□□□ -0.74
CDC42-202ENST00000344548 IGLV2-11P01706 119 aa10.42□□□□□ -0.74
CDC42-202ENST00000344548 EDN2P20800 178 aa10.42□□□□□ -0.74
CDC42-202ENST00000344548 GALR1P47211 349 aa10.42□□□□□ -0.74
CDC42-202ENST00000344548 USMG5Q96IX5 58 aa10.42□□□□□ -0.74
CDC42-202ENST00000344548 GAR1Q9NY12 217 aaKnown RBP10.42□□□□□ -0.74
CDC42-202ENST00000344548 CD5LO43866 347 aa10.41□□□□□ -0.74
CDC42-202ENST00000344548 ANAPC16Q96DE5 110 aa10.41□□□□□ -0.74
CDC42-202ENST00000344548 ATG101Q9BSB4 218 aa10.41□□□□□ -0.74
CDC42-202ENST00000344548 PRSS22Q9GZN4 317 aa10.41□□□□□ -0.74
CDC42-202ENST00000344548 OTORQ9NRC9 128 aa10.41□□□□□ -0.74
CDC42-202ENST00000344548 KLF12Q9Y4X4 402 aa10.41□□□□□ -0.74
CDC42-202ENST00000344548 SCGB2A1O75556 95 aa10.41□□□□□ -0.74
CDC42-202ENST00000344548 MGST1P10620 155 aaKnown RBP10.41□□□□□ -0.74
CDC42-202ENST00000344548 SRP14P37108 136 aaKnown RBP10.41□□□□□ -0.74
CDC42-202ENST00000344548 CNN1P51911 297 aaKnown RBP10.41□□□□□ -0.74
CDC42-202ENST00000344548 GOLT1AQ6ZVE7 132 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms