RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 APOBEC3AP31941 199 aaPredicted RBP13.31□□□□□ -0.28
CDC42EP4-201ENST00000335793 OR10J3Q5JRS4 329 aa13.31□□□□□ -0.28
CDC42EP4-201ENST00000335793 TCF24Q7RTU0 167 aa13.31□□□□□ -0.28
CDC42EP4-201ENST00000335793 TMEM116Q8NCL8 245 aa13.31□□□□□ -0.28
CDC42EP4-201ENST00000335793 IGLV2-8P01709 118 aa13.31□□□□□ -0.28
CDC42EP4-201ENST00000335793 CD24P25063 80 aa13.31□□□□□ -0.28
CDC42EP4-201ENST00000335793 ATP5IP56385 69 aaPredicted RBP13.31□□□□□ -0.28
CDC42EP4-201ENST00000335793 C12orf54Q6X4T0 127 aa13.31□□□□□ -0.28
CDC42EP4-201ENST00000335793 SSX8Q7RTT4 187 aa13.31□□□□□ -0.28
CDC42EP4-201ENST00000335793 NUP35Q8NFH5 326 aa13.31□□□□□ -0.28
CDC42EP4-201ENST00000335793 FAM167A-AS1Q96KT0 104 aa13.31□□□□□ -0.28
CDC42EP4-201ENST00000335793 MRPL36Q9P0J6 103 aaKnown RBP13.31□□□□□ -0.28
CDC42EP4-201ENST00000335793 TCRBV4S1A1TA0A5B7 111 aa13.3□□□□□ -0.28
CDC42EP4-201ENST00000335793 HIST1H1EP10412 219 aaKnown RBP13.3□□□□□ -0.28
CDC42EP4-201ENST00000335793 TM4SF20Q53R12 229 aa13.3□□□□□ -0.28
CDC42EP4-201ENST00000335793 SRSF8Q9BRL6 282 aaKnown RBP13.3□□□□□ -0.28
CDC42EP4-201ENST00000335793 JMJD8Q96S16 334 aa13.3□□□□□ -0.28
CDC42EP4-201ENST00000335793 ADIPOQQ15848 244 aa13.3□□□□□ -0.28
CDC42EP4-201ENST00000335793 ZNF833PQ6ZTB9 187 aa13.3□□□□□ -0.28
CDC42EP4-201ENST00000335793 SPENQ96T58 3664 aaKnown RBP13.29□□□□□ -0.28
CDC42EP4-201ENST00000335793 PATE2Q6UY27 113 aa13.29□□□□□ -0.28
CDC42EP4-201ENST00000335793 SMIM27A0A1W2PRY6 76 aa13.29□□□□□ -0.28
CDC42EP4-201ENST00000335793 COX7A1P24310 79 aa13.29□□□□□ -0.28
CDC42EP4-201ENST00000335793 LYZP61626 148 aa13.29□□□□□ -0.28
CDC42EP4-201ENST00000335793 OR5AN1Q8NGI8 311 aa13.29□□□□□ -0.28
CDC42EP4-201ENST00000335793 RITA1Q96K30 269 aa13.29□□□□□ -0.28
CDC42EP4-201ENST00000335793 ASCL5Q7RTU5 278 aa13.28□□□□□ -0.28
CDC42EP4-201ENST00000335793 ZNF329Q86UD4 541 aa13.28□□□□□ -0.28
CDC42EP4-201ENST00000335793 MTURNQ8N3F0 131 aa13.28□□□□□ -0.28
CDC42EP4-201ENST00000335793 PGLYRP4Q96LB8 373 aa13.28□□□□□ -0.28
CDC42EP4-201ENST00000335793 IGF2BP2-AS1Q96M15 143 aa13.28□□□□□ -0.28
CDC42EP4-201ENST00000335793 TPPP3Q9BW30 176 aa13.28□□□□□ -0.28
CDC42EP4-201ENST00000335793 TLN1Q9Y490 2541 aaKnown RBP13.28□□□□□ -0.28
CDC42EP4-201ENST00000335793 C18orf32Q8TCD1 76 aa13.28□□□□□ -0.28
CDC42EP4-201ENST00000335793 A0A1W2PPI3 338 aa13.28□□□□□ -0.28
CDC42EP4-201ENST00000335793 CD5LO43866 347 aa13.28□□□□□ -0.28
CDC42EP4-201ENST00000335793 RBP4P02753 201 aa13.28□□□□□ -0.28
CDC42EP4-201ENST00000335793 TMEM167AQ8TBQ9 72 aa13.28□□□□□ -0.28
CDC42EP4-201ENST00000335793 FAM87AP0C7U9 286 aa13.27□□□□□ -0.28
CDC42EP4-201ENST00000335793 RPL27AP46776 148 aaKnown RBP13.27□□□□□ -0.28
CDC42EP4-201ENST00000335793 RPS20P60866 119 aaKnown RBP13.27□□□□□ -0.28
CDC42EP4-201ENST00000335793 OR2K2Q8NGT1 345 aa13.27□□□□□ -0.28
CDC42EP4-201ENST00000335793 GRAMD2BQ96HH9 432 aa13.27□□□□□ -0.28
CDC42EP4-201ENST00000335793 EPDR1Q9UM22 224 aa13.27□□□□□ -0.28
CDC42EP4-201ENST00000335793 DSCAML1Q8TD84 2053 aa13.27□□□□□ -0.29
CDC42EP4-201ENST00000335793 AKAP6Q13023 2319 aa13.27□□□□□ -0.29
CDC42EP4-201ENST00000335793 P01737 135 aa13.27□□□□□ -0.29
CDC42EP4-201ENST00000335793 HTR1DP28221 377 aa13.27□□□□□ -0.29
CDC42EP4-201ENST00000335793 PIP4P1Q86T03 277 aa13.27□□□□□ -0.29
CDC42EP4-201ENST00000335793 SPACA3Q8IXA5 215 aa13.27□□□□□ -0.29
CDC42EP4-201ENST00000335793 INSIG2Q9Y5U4 225 aa13.27□□□□□ -0.29
CDC42EP4-201ENST00000335793 CNIH1O95406 144 aa13.26□□□□□ -0.29
CDC42EP4-201ENST00000335793 TMEM30BQ3MIR4 351 aa13.26□□□□□ -0.29
CDC42EP4-201ENST00000335793 GATA3P23771 443 aa13.26□□□□□ -0.29
CDC42EP4-201ENST00000335793 TEX36Q5VZQ5 186 aa13.26□□□□□ -0.29
CDC42EP4-201ENST00000335793 GFRALQ6UXV0 394 aa13.26□□□□□ -0.29
CDC42EP4-201ENST00000335793 Q6ZS92 163 aa13.26□□□□□ -0.29
CDC42EP4-201ENST00000335793 GEMIN7Q9H840 131 aaKnown RBP13.26□□□□□ -0.29
CDC42EP4-201ENST00000335793 SPCS1Q9Y6A9 102 aa13.26□□□□□ -0.29
CDC42EP4-201ENST00000335793 LYNX1G3V0Z9 82 aa13.26□□□□□ -0.29
CDC42EP4-201ENST00000335793 TMEM178BH3BS89 294 aa13.26□□□□□ -0.29
CDC42EP4-201ENST00000335793 CHEK1O14757 476 aa13.26□□□□□ -0.29
CDC42EP4-201ENST00000335793 CSN3P07498 182 aa13.26□□□□□ -0.29
CDC42EP4-201ENST00000335793 LYNX1P0DP58 116 aa13.26□□□□□ -0.29
CDC42EP4-201ENST00000335793 CNTFRP26992 372 aa13.26□□□□□ -0.29
CDC42EP4-201ENST00000335793 HSD52Q0P140 79 aa13.26□□□□□ -0.29
CDC42EP4-201ENST00000335793 OR10AG1Q8NH19 301 aa13.26□□□□□ -0.29
CDC42EP4-201ENST00000335793 FAM57AQ8TBR7 257 aa13.26□□□□□ -0.29
CDC42EP4-201ENST00000335793 TRAV8-1A0A0A6YYK1 113 aa13.25□□□□□ -0.29
CDC42EP4-201ENST00000335793 GPR183P32249 361 aa13.25□□□□□ -0.29
CDC42EP4-201ENST00000335793 FXYD5Q96DB9 178 aa13.25□□□□□ -0.29
CDC42EP4-201ENST00000335793 A0A0G2JNJ9 132 aa13.25□□□□□ -0.29
CDC42EP4-201ENST00000335793 COL8A1P27658 744 aa13.25□□□□□ -0.29
CDC42EP4-201ENST00000335793 Q9UFV3 132 aa13.25□□□□□ -0.29
CDC42EP4-201ENST00000335793 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.24□□□□□ -0.29
CDC42EP4-201ENST00000335793 TMEM70Q9BUB7 260 aa13.24□□□□□ -0.29
CDC42EP4-201ENST00000335793 PRNTQ86SH4 94 aa13.24□□□□□ -0.29
CDC42EP4-201ENST00000335793 GPR82Q96P67 336 aa13.24□□□□□ -0.29
CDC42EP4-201ENST00000335793 ASCL2Q99929 193 aa13.24□□□□□ -0.29
CDC42EP4-201ENST00000335793 ZZEF1O43149 2961 aa13.24□□□□□ -0.29
CDC42EP4-201ENST00000335793 ATP5G2Q06055 141 aa13.24□□□□□ -0.29
CDC42EP4-201ENST00000335793 CCDC144NLQ6NUI1 221 aa13.24□□□□□ -0.29
CDC42EP4-201ENST00000335793 JKAMPQ9P055 326 aa13.24□□□□□ -0.29
CDC42EP4-201ENST00000335793 GAGE12HA6NDE8 117 aa13.23□□□□□ -0.29
CDC42EP4-201ENST00000335793 A8MWL6 223 aa13.23□□□□□ -0.29
CDC42EP4-201ENST00000335793 RAI1Q7Z5J4 1906 aaPredicted RBP13.23□□□□□ -0.29
CDC42EP4-201ENST00000335793 GDF5OSQ5U4N7 250 aa13.23□□□□□ -0.29
CDC42EP4-201ENST00000335793 RUSC1-AS1Q66K80 236 aa13.23□□□□□ -0.29
CDC42EP4-201ENST00000335793 FBXL15Q9H469 300 aa13.23□□□□□ -0.29
CDC42EP4-201ENST00000335793 ATMQ13315 3056 aa13.23□□□□□ -0.29
CDC42EP4-201ENST00000335793 TACC2O95359 2948 aa13.23□□□□□ -0.29
CDC42EP4-201ENST00000335793 A0A0G2JLM5 398 aa13.23□□□□□ -0.29
CDC42EP4-201ENST00000335793 NPFFR1Q9GZQ6 430 aa13.23□□□□□ -0.29
CDC42EP4-201ENST00000335793 CTSZQ9UBR2 303 aa13.23□□□□□ -0.29
CDC42EP4-201ENST00000335793 SPTAN1Q13813 2472 aaKnown RBP13.22□□□□□ -0.29
CDC42EP4-201ENST00000335793 IGKV1D-37A0A075B6S9 117 aa13.22□□□□□ -0.29
CDC42EP4-201ENST00000335793 CGB1A6NKQ9 187 aa13.22□□□□□ -0.29
CDC42EP4-201ENST00000335793 ZNF138P52744 262 aa13.22□□□□□ -0.29
CDC42EP4-201ENST00000335793 Q9H3A6 140 aa13.22□□□□□ -0.29
CDC42EP4-201ENST00000335793 COL6A6A6NMZ7 2263 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms