RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 CCDC160A6NGH7 325 aa4.69□□□□□ -1.66
SMG1-201ENST00000330588 IGKV1-17P01599 117 aa4.69□□□□□ -1.66
SMG1-201ENST00000330588 NBEAP1P0C6P0 100 aa4.69□□□□□ -1.66
SMG1-201ENST00000330588 NPPCP23582 126 aa4.69□□□□□ -1.66
SMG1-201ENST00000330588 NPY1RP25929 384 aa4.69□□□□□ -1.66
SMG1-201ENST00000330588 RBMS2Q15434 407 aaKnown RBP4.69□□□□□ -1.66
SMG1-201ENST00000330588 PYDC2Q56P42 97 aa4.69□□□□□ -1.66
SMG1-201ENST00000330588 DNLZQ5SXM8 178 aa4.69□□□□□ -1.66
SMG1-201ENST00000330588 TOMM20LQ6UXN7 152 aa4.69□□□□□ -1.66
SMG1-201ENST00000330588 GATAD1Q8WUU5 269 aa4.69□□□□□ -1.66
SMG1-201ENST00000330588 PINX1Q96BK5 328 aaKnown RBP4.69□□□□□ -1.66
SMG1-201ENST00000330588 NARS2Q96I59 477 aaKnown RBP4.69□□□□□ -1.66
SMG1-201ENST00000330588 METTL26Q96S19 204 aa4.69□□□□□ -1.66
SMG1-201ENST00000330588 C7orf50Q9BRJ6 194 aaKnown RBP4.69□□□□□ -1.66
SMG1-201ENST00000330588 ALKBH7Q9BT30 221 aaPredicted RBP4.69□□□□□ -1.66
SMG1-201ENST00000330588 HEYLQ9NQ87 328 aaPredicted RBP4.69□□□□□ -1.66
SMG1-201ENST00000330588 MCUBQ9NWR8 336 aa4.69□□□□□ -1.66
SMG1-201ENST00000330588 GOLT1BQ9Y3E0 138 aa4.69□□□□□ -1.66
SMG1-201ENST00000330588 TMED3Q9Y3Q3 217 aa4.69□□□□□ -1.66
SMG1-201ENST00000330588 ALG5Q9Y673 324 aa4.69□□□□□ -1.66
SMG1-201ENST00000330588 IGHV3-21A0A0B4J1V1 117 aa4.68□□□□□ -1.66
SMG1-201ENST00000330588 CEBPZOSA8MTT3 80 aa4.68□□□□□ -1.66
SMG1-201ENST00000330588 PITX3O75364 302 aa4.68□□□□□ -1.66
SMG1-201ENST00000330588 IGLC1P0CG04 106 aa4.68□□□□□ -1.66
SMG1-201ENST00000330588 AKR1C4P17516 323 aa4.68□□□□□ -1.66
SMG1-201ENST00000330588 BLOC1S1P78537 153 aa4.68□□□□□ -1.66
SMG1-201ENST00000330588 RNF212Q495C1 297 aa4.68□□□□□ -1.66
SMG1-201ENST00000330588 LINC00299Q6ZSB3 139 aa4.68□□□□□ -1.66
SMG1-201ENST00000330588 DAZAP1Q96EP5 407 aaKnown RBP4.68□□□□□ -1.66
SMG1-201ENST00000330588 CIB3Q96Q77 187 aaPredicted RBP4.68□□□□□ -1.66
SMG1-201ENST00000330588 RNF2Q99496 336 aa4.68□□□□□ -1.66
SMG1-201ENST00000330588 OVOL2Q9BRP0 275 aa4.68□□□□□ -1.66
SMG1-201ENST00000330588 WFDC10AQ9H1F0 79 aa4.68□□□□□ -1.66
SMG1-201ENST00000330588 LCE6AA0A183 80 aa4.67□□□□□ -1.66
SMG1-201ENST00000330588 LINC00862A6NCI5 91 aa4.67□□□□□ -1.66
SMG1-201ENST00000330588 YIF1AO95070 293 aa4.67□□□□□ -1.66
SMG1-201ENST00000330588 SFT2D2O95562 160 aa4.67□□□□□ -1.66
SMG1-201ENST00000330588 TOMM40O96008 361 aa4.67□□□□□ -1.66
SMG1-201ENST00000330588 RPL35P42766 123 aaKnown RBP4.67□□□□□ -1.66
SMG1-201ENST00000330588 RAB11AP62491 216 aa4.67□□□□□ -1.66
SMG1-201ENST00000330588 SPINK9Q5DT21 86 aa4.67□□□□□ -1.66
SMG1-201ENST00000330588 OR8G2PQ6IF36 304 aa4.67□□□□□ -1.66
SMG1-201ENST00000330588 PRSS54Q6PEW0 395 aa4.67□□□□□ -1.66
SMG1-201ENST00000330588 TCF24Q7RTU0 167 aa4.67□□□□□ -1.66
SMG1-201ENST00000330588 STOML3Q8TAV4 291 aa4.67□□□□□ -1.66
SMG1-201ENST00000330588 Q8WTZ3 238 aa4.67□□□□□ -1.66
SMG1-201ENST00000330588 RNF183Q96D59 192 aa4.67□□□□□ -1.66
SMG1-201ENST00000330588 SRRQ9GZT4 340 aa4.67□□□□□ -1.66
SMG1-201ENST00000330588 MAP6D1Q9H9H5 199 aa4.67□□□□□ -1.66
SMG1-201ENST00000330588 TBC1D24Q9ULP9 559 aa4.67□□□□□ -1.66
SMG1-201ENST00000330588 FAM240BA0A1B0GVZ2 78 aa4.66□□□□□ -1.66
SMG1-201ENST00000330588 K7EQG2 157 aa4.66□□□□□ -1.66
SMG1-201ENST00000330588 ARPC5O15511 151 aa4.66□□□□□ -1.66
SMG1-201ENST00000330588 SPRY2O43597 315 aa4.66□□□□□ -1.66
SMG1-201ENST00000330588 CFDP00746 253 aaPredicted RBP4.66□□□□□ -1.66
SMG1-201ENST00000330588 OR10J1P30954 320 aa4.66□□□□□ -1.66
SMG1-201ENST00000330588 AKR1D1P51857 326 aa4.66□□□□□ -1.66
SMG1-201ENST00000330588 RND2P52198 227 aa4.66□□□□□ -1.66
SMG1-201ENST00000330588 PSG3Q16557 428 aa4.66□□□□□ -1.66
SMG1-201ENST00000330588 SAMD13Q5VXD3 122 aa4.66□□□□□ -1.66
SMG1-201ENST00000330588 LYZL2Q7Z4W2 148 aa4.66□□□□□ -1.66
SMG1-201ENST00000330588 TMEM217Q8N7C4 229 aa4.66□□□□□ -1.66
SMG1-201ENST00000330588 OR1S1Q8NH92 325 aa4.66□□□□□ -1.66
SMG1-201ENST00000330588 TMEM170AQ8WVE7 144 aa4.66□□□□□ -1.66
SMG1-201ENST00000330588 C14orf144Q96I85 54 aa4.66□□□□□ -1.66
SMG1-201ENST00000330588 MLST8Q9BVC4 326 aa4.66□□□□□ -1.66
SMG1-201ENST00000330588 CSTL1Q9H114 145 aa4.66□□□□□ -1.66
SMG1-201ENST00000330588 MS4A6AQ9H2W1 248 aa4.66□□□□□ -1.66
SMG1-201ENST00000330588 C11orf68Q9H3H3 251 aaKnown RBP4.66□□□□□ -1.66
SMG1-201ENST00000330588 RBKSQ9H477 322 aa4.66□□□□□ -1.66
SMG1-201ENST00000330588 GEMIN7Q9H840 131 aaKnown RBP4.66□□□□□ -1.66
SMG1-201ENST00000330588 GPN1Q9HCN4 374 aaPredicted RBP4.66□□□□□ -1.66
SMG1-201ENST00000330588 CENPXA8MT69 81 aa4.65□□□□□ -1.66
SMG1-201ENST00000330588 DNASE2O00115 360 aaPredicted RBP4.65□□□□□ -1.66
SMG1-201ENST00000330588 DLEU1O43261 78 aa4.65□□□□□ -1.66
SMG1-201ENST00000330588 ZNF207O43670 478 aaKnown RBP4.65□□□□□ -1.66
SMG1-201ENST00000330588 NDUFB6O95139 128 aa4.65□□□□□ -1.66
SMG1-201ENST00000330588 SPP1P10451 314 aa4.65□□□□□ -1.66
SMG1-201ENST00000330588 S100A7P31151 101 aa4.65□□□□□ -1.66
SMG1-201ENST00000330588 P2RY1P47900 373 aa4.65□□□□□ -1.66
SMG1-201ENST00000330588 TIGITQ495A1 244 aa4.65□□□□□ -1.66
SMG1-201ENST00000330588 C1orf194Q5T5A4 169 aa4.65□□□□□ -1.66
SMG1-201ENST00000330588 MORN3Q6PF18 240 aaPredicted RBP4.65□□□□□ -1.66
SMG1-201ENST00000330588 DCANP1Q8TF63 244 aa4.65□□□□□ -1.66
SMG1-201ENST00000330588 PFDN5Q99471 154 aa4.65□□□□□ -1.66
SMG1-201ENST00000330588 TRGV9Q99603 122 aa4.65□□□□□ -1.66
SMG1-201ENST00000330588 RETNQ9HD89 108 aa4.65□□□□□ -1.66
SMG1-201ENST00000330588 MRPL36Q9P0J6 103 aaKnown RBP4.65□□□□□ -1.66
SMG1-201ENST00000330588 FBXL17Q9UF56 701 aa4.65□□□□□ -1.66
SMG1-201ENST00000330588 IGHV3OR16-8A0A075B7F1 116 aa4.65□□□□□ -1.67
SMG1-201ENST00000330588 NUPR2A6NF83 97 aa4.65□□□□□ -1.67
SMG1-201ENST00000330588 MPTX1A8MV57 137 aa4.65□□□□□ -1.67
SMG1-201ENST00000330588 FNDC10F2Z333 226 aa4.65□□□□□ -1.67
SMG1-201ENST00000330588 SYNGR2O43760 224 aa4.65□□□□□ -1.67
SMG1-201ENST00000330588 IGHV3-48P01763 117 aa4.65□□□□□ -1.67
SMG1-201ENST00000330588 RD3LP0DJH9 198 aa4.65□□□□□ -1.67
SMG1-201ENST00000330588 INPP1P49441 399 aa4.65□□□□□ -1.67
SMG1-201ENST00000330588 FGF8P55075 233 aaPredicted RBP4.65□□□□□ -1.67
SMG1-201ENST00000330588 PPP1R1AQ13522 171 aa4.65□□□□□ -1.67
SMG1-201ENST00000330588 TRIQKQ629K1 86 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms