RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 KIR3DS1Q14943 382 aa15.52■□□□□ 0.07
UBE2N-201ENST00000318066 LY6G5BQ8NDX9 201 aa15.52■□□□□ 0.07
UBE2N-201ENST00000318066 MBD3L4A6NDZ8 208 aaPredicted RBP15.51■□□□□ 0.07
UBE2N-201ENST00000318066 MBD3L3A6NE82 208 aaPredicted RBP15.51■□□□□ 0.07
UBE2N-201ENST00000318066 MBD3L5A6NJ08 208 aaPredicted RBP15.51■□□□□ 0.07
UBE2N-201ENST00000318066 SRRM4A7MD48 611 aaKnown RBP15.51■□□□□ 0.07
UBE2N-201ENST00000318066 MBD3L2Q8NHZ7 208 aaPredicted RBP15.51■□□□□ 0.07
UBE2N-201ENST00000318066 MDC1Q14676 2089 aaKnown RBP15.51■□□□□ 0.07
UBE2N-201ENST00000318066 LINC00473A8K010 186 aa15.51■□□□□ 0.07
UBE2N-201ENST00000318066 ZNF329Q86UD4 541 aa15.51■□□□□ 0.07
UBE2N-201ENST00000318066 SHANK2-AS3Q9BTD1 123 aa15.51■□□□□ 0.07
UBE2N-201ENST00000318066 BUB1B-PAK6H3BSN5 160 aa15.51■□□□□ 0.07
UBE2N-201ENST00000318066 NDUFB8O95169 186 aa15.51■□□□□ 0.07
UBE2N-201ENST00000318066 CD24P25063 80 aa15.51■□□□□ 0.07
UBE2N-201ENST00000318066 TMEM158Q8WZ71 300 aa15.51■□□□□ 0.07
UBE2N-201ENST00000318066 GAFA1Q96PS6 74 aa15.51■□□□□ 0.07
UBE2N-201ENST00000318066 VGLL1Q99990 258 aa15.5■□□□□ 0.07
UBE2N-201ENST00000318066 CST9LQ9H4G1 147 aa15.5■□□□□ 0.07
UBE2N-201ENST00000318066 ANAPC10Q9UM13 185 aa15.5■□□□□ 0.07
UBE2N-201ENST00000318066 TRAV40A0A0B4J280 105 aa15.5■□□□□ 0.07
UBE2N-201ENST00000318066 FOXG1P55316 489 aaPredicted RBP15.5■□□□□ 0.07
UBE2N-201ENST00000318066 hDV102S1A0JD36 115 aa15.5■□□□□ 0.07
UBE2N-201ENST00000318066 TFF1P04155 84 aa15.5■□□□□ 0.07
UBE2N-201ENST00000318066 RPL15P61313 204 aaKnown RBP15.5■□□□□ 0.07
UBE2N-201ENST00000318066 CHD5Q8TDI0 1954 aa15.5■□□□□ 0.07
UBE2N-201ENST00000318066 A0A0G2JMZ2 1700 aa15.5■□□□□ 0.07
UBE2N-201ENST00000318066 LRRC37A2A6NM11 1700 aa15.5■□□□□ 0.07
UBE2N-201ENST00000318066 LEPROTO15243 131 aa15.49■□□□□ 0.07
UBE2N-201ENST00000318066 TRAV3A0A0B4J244 114 aa15.49■□□□□ 0.07
UBE2N-201ENST00000318066 PAX4O43316 350 aa15.49■□□□□ 0.07
UBE2N-201ENST00000318066 TMEM155Q4W5P6 130 aa15.49■□□□□ 0.07
UBE2N-201ENST00000318066 PDCD11Q14690 1871 aaKnown RBP15.49■□□□□ 0.07
UBE2N-201ENST00000318066 SDK2Q58EX2 2172 aa15.49■□□□□ 0.07
UBE2N-201ENST00000318066 IGHG3P01860 377 aa15.49■□□□□ 0.07
UBE2N-201ENST00000318066 ADCYAP1P18509 176 aa15.49■□□□□ 0.07
UBE2N-201ENST00000318066 ZNF562Q6V9R5 426 aa15.49■□□□□ 0.07
UBE2N-201ENST00000318066 TMEM75Q8N9X5 138 aa15.49■□□□□ 0.07
UBE2N-201ENST00000318066 MDS2Q8NDY4 140 aa15.49■□□□□ 0.07
UBE2N-201ENST00000318066 PFN1P07737 140 aaKnown RBP15.49■□□□□ 0.07
UBE2N-201ENST00000318066 ZCCHC24Q8N2G6 241 aaKnown RBP15.49■□□□□ 0.07
UBE2N-201ENST00000318066 CHAC1Q9BUX1 264 aa15.49■□□□□ 0.07
UBE2N-201ENST00000318066 CSTL1Q9H114 145 aa15.49■□□□□ 0.07
UBE2N-201ENST00000318066 AKAP6Q13023 2319 aa15.49■□□□□ 0.07
UBE2N-201ENST00000318066 TRBV20-1A0A075B6N2 111 aa15.48■□□□□ 0.07
UBE2N-201ENST00000318066 A0A087X0K7 114 aa15.48■□□□□ 0.07
UBE2N-201ENST00000318066 B4DSR2 109 aa15.48■□□□□ 0.07
UBE2N-201ENST00000318066 COX11Q9Y6N1 276 aa15.48■□□□□ 0.07
UBE2N-201ENST00000318066 GAGE12BA1L429 117 aa15.48■□□□□ 0.07
UBE2N-201ENST00000318066 CEP250Q9BV73 2442 aa15.48■□□□□ 0.07
UBE2N-201ENST00000318066 INTS1Q8N201 2190 aaKnown RBP15.47■□□□□ 0.07
UBE2N-201ENST00000318066 RHODO00212 210 aa15.47■□□□□ 0.07
UBE2N-201ENST00000318066 YPEL3P61236 119 aaPredicted RBP15.47■□□□□ 0.07
UBE2N-201ENST00000318066 LYNX1G3V0Z9 82 aa15.47■□□□□ 0.07
UBE2N-201ENST00000318066 LYNX1P0DP58 116 aa15.47■□□□□ 0.07
UBE2N-201ENST00000318066 TIMM21Q9BVV7 248 aa15.47■□□□□ 0.07
UBE2N-201ENST00000318066 MMP23AO75900 390 aa15.47■□□□□ 0.07
UBE2N-201ENST00000318066 CD59P13987 128 aa15.47■□□□□ 0.07
UBE2N-201ENST00000318066 SELLP14151 372 aa15.47■□□□□ 0.07
UBE2N-201ENST00000318066 LMO1P25800 156 aa15.47■□□□□ 0.07
UBE2N-201ENST00000318066 MST1LQ2TV78 715 aa15.47■□□□□ 0.07
UBE2N-201ENST00000318066 FAM231DQ6ZW35 169 aa15.47■□□□□ 0.07
UBE2N-201ENST00000318066 CD33P20138 364 aa15.47■□□□□ 0.07
UBE2N-201ENST00000318066 GATD1Q8NB37 220 aa15.47■□□□□ 0.07
UBE2N-201ENST00000318066 LIME1Q9H400 295 aa15.47■□□□□ 0.07
UBE2N-201ENST00000318066 PRDM6Q9NQX0 595 aa15.47■□□□□ 0.07
UBE2N-201ENST00000318066 LSM4Q9Y4Z0 139 aaKnown RBP15.47■□□□□ 0.07
UBE2N-201ENST00000318066 EP300Q09472 2414 aaPredicted RBP15.46■□□□□ 0.07
UBE2N-201ENST00000318066 ETV2O00321 342 aaPredicted RBP15.46■□□□□ 0.07
UBE2N-201ENST00000318066 INSP01308 110 aa15.46■□□□□ 0.07
UBE2N-201ENST00000318066 ERCC8Q13216 396 aa15.46■□□□□ 0.07
UBE2N-201ENST00000318066 B3GALT5-AS1P59052 145 aa15.46■□□□□ 0.07
UBE2N-201ENST00000318066 GAGE1Q13065 139 aa15.46■□□□□ 0.07
UBE2N-201ENST00000318066 C3orf36Q3SXR2 165 aa15.46■□□□□ 0.07
UBE2N-201ENST00000318066 TMEM141Q96I45 108 aa15.46■□□□□ 0.07
UBE2N-201ENST00000318066 SNHG12Q9BXW3 62 aa15.46■□□□□ 0.07
UBE2N-201ENST00000318066 IGKV1D-17A0A075B6S4 117 aa15.46■□□□□ 0.07
UBE2N-201ENST00000318066 TMEM105Q8N8V8 129 aa15.46■□□□□ 0.07
UBE2N-201ENST00000318066 DOCK6Q96HP0 2047 aa15.46■□□□□ 0.06
UBE2N-201ENST00000318066 A0A1W2PRX2 142 aa15.46■□□□□ 0.06
UBE2N-201ENST00000318066 TRPT1Q86TN4 253 aaKnown RBP15.46■□□□□ 0.06
UBE2N-201ENST00000318066 INAFM2P0DMQ5 153 aa15.45■□□□□ 0.06
UBE2N-201ENST00000318066 PRTN3P24158 256 aa15.45■□□□□ 0.06
UBE2N-201ENST00000318066 NYNRINQ9P2P1 1898 aaKnown RBP15.45■□□□□ 0.06
UBE2N-201ENST00000318066 TRAV8-1A0A0A6YYK1 113 aa15.45■□□□□ 0.06
UBE2N-201ENST00000318066 LCTP09848 1927 aa15.45■□□□□ 0.06
UBE2N-201ENST00000318066 PRSS46E5RG02 174 aa15.45■□□□□ 0.06
UBE2N-201ENST00000318066 TNFRSF6BO95407 300 aa15.45■□□□□ 0.06
UBE2N-201ENST00000318066 Q6ZRM9 215 aa15.44■□□□□ 0.06
UBE2N-201ENST00000318066 TMEM249Q2WGJ8 235 aa15.44■□□□□ 0.06
UBE2N-201ENST00000318066 A0A0G2JRQ6 117 aa15.44■□□□□ 0.06
UBE2N-201ENST00000318066 C6orf226Q5I0X4 101 aa15.44■□□□□ 0.06
UBE2N-201ENST00000318066 DMRTC2Q8IXT2 367 aaPredicted RBP15.44■□□□□ 0.06
UBE2N-201ENST00000318066 AMN1Q8IY45 258 aa15.44■□□□□ 0.06
UBE2N-201ENST00000318066 CACNA1EQ15878 2313 aa15.44■□□□□ 0.06
UBE2N-201ENST00000318066 IGHV3-64A0A075B6Q5 118 aa15.43■□□□□ 0.06
UBE2N-201ENST00000318066 OCIAD2Q56VL3 154 aa15.43■□□□□ 0.06
UBE2N-201ENST00000318066 ABCA7Q8IZY2 2146 aa15.43■□□□□ 0.06
UBE2N-201ENST00000318066 C14orf178Q8N769 122 aaPredicted RBP15.43■□□□□ 0.06
UBE2N-201ENST00000318066 DAZ1Q9NQZ3 744 aaKnown RBP15.43■□□□□ 0.06
UBE2N-201ENST00000318066 LAMTOR3Q9UHA4 124 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms