RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 MRPL20Q9BYC9 149 aaKnown RBP12.58□□□□□ -0.4
LEMD3-201ENST00000308330 A0A087WV48 116 aa12.58□□□□□ -0.4
LEMD3-201ENST00000308330 Q6ZS92 163 aa12.58□□□□□ -0.4
LEMD3-201ENST00000308330 HEATR5AQ86XA9 2040 aa12.58□□□□□ -0.4
LEMD3-201ENST00000308330 IGLV3-32A0A0A0MS00 114 aa12.58□□□□□ -0.4
LEMD3-201ENST00000308330 LINC01549A6NIU2 74 aa12.58□□□□□ -0.4
LEMD3-201ENST00000308330 FOXF2Q12947 444 aa12.58□□□□□ -0.4
LEMD3-201ENST00000308330 ECSCRQ19T08 205 aa12.58□□□□□ -0.4
LEMD3-201ENST00000308330 IGLL5B9A064 214 aa12.57□□□□□ -0.4
LEMD3-201ENST00000308330 K7ENP7 123 aa12.57□□□□□ -0.4
LEMD3-201ENST00000308330 CRXO43186 299 aaPredicted RBP12.57□□□□□ -0.4
LEMD3-201ENST00000308330 RRN3P1Q2M238 152 aa12.57□□□□□ -0.4
LEMD3-201ENST00000308330 VWC2Q2TAL6 325 aa12.57□□□□□ -0.4
LEMD3-201ENST00000308330 LINC01559Q495D7 138 aa12.57□□□□□ -0.4
LEMD3-201ENST00000308330 ARTNQ5T4W7 220 aa12.57□□□□□ -0.4
LEMD3-201ENST00000308330 ATP6V0E2Q8NHE4 81 aa12.57□□□□□ -0.4
LEMD3-201ENST00000308330 DNAJC30Q96LL9 226 aa12.57□□□□□ -0.4
LEMD3-201ENST00000308330 H0YJW9 148 aa12.57□□□□□ -0.4
LEMD3-201ENST00000308330 C12orf74Q32Q52 190 aa12.57□□□□□ -0.4
LEMD3-201ENST00000308330 LYZP61626 148 aa12.57□□□□□ -0.4
LEMD3-201ENST00000308330 NMSQ5H8A3 153 aa12.57□□□□□ -0.4
LEMD3-201ENST00000308330 EBLN2Q6P2I7 272 aa12.57□□□□□ -0.4
LEMD3-201ENST00000308330 CELA3BP08861 270 aa12.57□□□□□ -0.4
LEMD3-201ENST00000308330 PAX1P15863 534 aa12.57□□□□□ -0.4
LEMD3-201ENST00000308330 SCRT2Q9NQ03 307 aa12.57□□□□□ -0.4
LEMD3-201ENST00000308330 DLL3Q9NYJ7 618 aa12.57□□□□□ -0.4
LEMD3-201ENST00000308330 FAM236AA0A1B0GUQ0 79 aa12.56□□□□□ -0.4
LEMD3-201ENST00000308330 FAM236BA0A1B0GV22 79 aa12.56□□□□□ -0.4
LEMD3-201ENST00000308330 TMEM258P61165 79 aa12.56□□□□□ -0.4
LEMD3-201ENST00000308330 PSG7Q13046 419 aa12.56□□□□□ -0.4
LEMD3-201ENST00000308330 SPANXB1Q9NS25 103 aaPredicted RBP12.56□□□□□ -0.4
LEMD3-201ENST00000308330 TRBV20OR9-2A0A075B6H5 130 aa12.56□□□□□ -0.4
LEMD3-201ENST00000308330 IGHV3OR16-10A0A075B7F0 116 aa12.56□□□□□ -0.4
LEMD3-201ENST00000308330 MRPL32Q9BYC8 188 aaKnown RBP12.56□□□□□ -0.4
LEMD3-201ENST00000308330 TRAV13-1A0A0B4J241 112 aa12.56□□□□□ -0.4
LEMD3-201ENST00000308330 WNT2P09544 360 aa12.56□□□□□ -0.4
LEMD3-201ENST00000308330 MRPL55Q7Z7F7 128 aaKnown RBP12.56□□□□□ -0.4
LEMD3-201ENST00000308330 FAM168AQ92567 244 aa12.56□□□□□ -0.4
LEMD3-201ENST00000308330 LY6G6EA0A0G2JKS1 128 aa12.55□□□□□ -0.4
LEMD3-201ENST00000308330 FAM201AQ5SY85 155 aa12.55□□□□□ -0.4
LEMD3-201ENST00000308330 Q6AWC8 147 aa12.55□□□□□ -0.4
LEMD3-201ENST00000308330 ZCCHC24Q8N2G6 241 aaKnown RBP12.55□□□□□ -0.4
LEMD3-201ENST00000308330 ANKRD29Q8N6D5 301 aa12.55□□□□□ -0.4
LEMD3-201ENST00000308330 ZNRF1Q8ND25 227 aa12.55□□□□□ -0.4
LEMD3-201ENST00000308330 NTN5Q8WTR8 489 aaPredicted RBP12.55□□□□□ -0.4
LEMD3-201ENST00000308330 U3KQA8 63 aa12.55□□□□□ -0.4
LEMD3-201ENST00000308330 SS18L1O75177 396 aaPredicted RBP12.55□□□□□ -0.4
LEMD3-201ENST00000308330 SPANXN1Q5VSR9 72 aa12.55□□□□□ -0.4
LEMD3-201ENST00000308330 LINC00114Q6XXX2 140 aa12.55□□□□□ -0.4
LEMD3-201ENST00000308330 SCGB3A1Q96QR1 104 aa12.55□□□□□ -0.4
LEMD3-201ENST00000308330 TICRRQ7Z2Z1 1910 aa12.55□□□□□ -0.4
LEMD3-201ENST00000308330 DOCK10Q96BY6 2186 aa12.55□□□□□ -0.4
LEMD3-201ENST00000308330 IGKV3-7A0A075B6H7 116 aa12.55□□□□□ -0.4
LEMD3-201ENST00000308330 CCDC179H3BU77 68 aa12.55□□□□□ -0.4
LEMD3-201ENST00000308330 CENPVQ7Z7K6 275 aaPredicted RBP12.55□□□□□ -0.4
LEMD3-201ENST00000308330 OR11H6Q8NGC7 330 aa12.55□□□□□ -0.4
LEMD3-201ENST00000308330 SCRT1Q9BWW7 348 aa12.55□□□□□ -0.4
LEMD3-201ENST00000308330 TAL2Q16559 108 aa12.54□□□□□ -0.4
LEMD3-201ENST00000308330 NEGR1Q7Z3B1 354 aa12.54□□□□□ -0.4
LEMD3-201ENST00000308330 NEU4Q8WWR8 484 aaPredicted RBP12.54□□□□□ -0.4
LEMD3-201ENST00000308330 LMO1P25800 156 aa12.54□□□□□ -0.4
LEMD3-201ENST00000308330 A0A0U1RQV1 116 aa12.54□□□□□ -0.4
LEMD3-201ENST00000308330 FAM166AQ6J272 317 aa12.54□□□□□ -0.4
LEMD3-201ENST00000308330 NPIPB3Q92617 1050 aa12.54□□□□□ -0.4
LEMD3-201ENST00000308330 CALYQ9NYX4 217 aa12.54□□□□□ -0.4
LEMD3-201ENST00000308330 VPREB3Q9UKI3 123 aa12.54□□□□□ -0.4
LEMD3-201ENST00000308330 CSDC2Q9Y534 153 aaKnown RBP12.54□□□□□ -0.4
LEMD3-201ENST00000308330 WNT9BO14905 357 aa12.54□□□□□ -0.4
LEMD3-201ENST00000308330 EFNA2O43921 213 aa12.54□□□□□ -0.4
LEMD3-201ENST00000308330 SEC61GP60059 68 aa12.54□□□□□ -0.4
LEMD3-201ENST00000308330 C1orf195Q5TG92 126 aa12.53□□□□□ -0.4
LEMD3-201ENST00000308330 GCSAMQ8N6F7 178 aa12.53□□□□□ -0.4
LEMD3-201ENST00000308330 MDS2Q8NDY4 140 aa12.53□□□□□ -0.4
LEMD3-201ENST00000308330 ANKHD1Q8IWZ3 2542 aaKnown RBP12.53□□□□□ -0.4
LEMD3-201ENST00000308330 HAX1O00165 279 aa12.53□□□□□ -0.4
LEMD3-201ENST00000308330 PLAUP00749 431 aa12.53□□□□□ -0.4
LEMD3-201ENST00000308330 SYNJ2BPP57105 145 aa12.53□□□□□ -0.4
LEMD3-201ENST00000308330 SPATA12Q7Z6I5 190 aa12.53□□□□□ -0.4
LEMD3-201ENST00000308330 VKORC1L1Q8N0U8 176 aa12.53□□□□□ -0.4
LEMD3-201ENST00000308330 OR13A1Q8NGR1 328 aa12.53□□□□□ -0.4
LEMD3-201ENST00000308330 S100A7L2Q5SY68 101 aa12.53□□□□□ -0.4
LEMD3-201ENST00000308330 PEAR1Q5VY43 1037 aaPredicted RBP12.53□□□□□ -0.4
LEMD3-201ENST00000308330 CENPVL3A0A0U1RRI6 287 aa12.53□□□□□ -0.4
LEMD3-201ENST00000308330 MGPP08493 103 aa12.53□□□□□ -0.4
LEMD3-201ENST00000308330 GOLT1AQ6ZVE7 132 aa12.53□□□□□ -0.4
LEMD3-201ENST00000308330 MIR17HGQ75NE6 70 aa12.53□□□□□ -0.4
LEMD3-201ENST00000308330 LRRC75A-AS1Q8N1F1 130 aa12.53□□□□□ -0.4
LEMD3-201ENST00000308330 TM2D1Q9BX74 207 aa12.53□□□□□ -0.4
LEMD3-201ENST00000308330 C17orf100A8MU93 164 aa12.52□□□□□ -0.4
LEMD3-201ENST00000308330 RBM3P98179 157 aaKnown RBP12.52□□□□□ -0.4
LEMD3-201ENST00000308330 CIRBPQ14011 172 aaKnown RBP12.52□□□□□ -0.4
LEMD3-201ENST00000308330 LY6EQ16553 131 aa12.52□□□□□ -0.4
LEMD3-201ENST00000308330 YPEL4Q96NS1 127 aa12.52□□□□□ -0.4
LEMD3-201ENST00000308330 PRNDQ9UKY0 176 aa12.52□□□□□ -0.4
LEMD3-201ENST00000308330 GOLGB1Q14789 3259 aaKnown RBP12.52□□□□□ -0.4
LEMD3-201ENST00000308330 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.52□□□□□ -0.41
LEMD3-201ENST00000308330 NPIPB6E9PJ23 425 aa12.52□□□□□ -0.41
LEMD3-201ENST00000308330 FOXG1P55316 489 aaPredicted RBP12.52□□□□□ -0.41
LEMD3-201ENST00000308330 SRSF1Q07955 248 aaKnown RBP eCLIP12.52□□□□□ -0.41
LEMD3-201ENST00000308330 DUX3Q96PT4 197 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms