RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 MC5RP33032 325 aa11.75□□□□□ -0.53
CCNF-201ENST00000293968 MYCNOSP40205 109 aa11.75□□□□□ -0.53
CCNF-201ENST00000293968 MLST8Q9BVC4 326 aa11.75□□□□□ -0.53
CCNF-201ENST00000293968 K7EP13 123 aa11.75□□□□□ -0.53
CCNF-201ENST00000293968 OCIAD2Q56VL3 154 aa11.75□□□□□ -0.53
CCNF-201ENST00000293968 OR10AG1Q8NH19 301 aa11.75□□□□□ -0.53
CCNF-201ENST00000293968 TRGV9Q99603 122 aa11.75□□□□□ -0.53
CCNF-201ENST00000293968 SLC25A39Q9BZJ4 359 aaPredicted RBP11.75□□□□□ -0.53
CCNF-201ENST00000293968 WNK2Q9Y3S1 2297 aa11.74□□□□□ -0.53
CCNF-201ENST00000293968 M0R3E3 92 aa11.74□□□□□ -0.53
CCNF-201ENST00000293968 HIST1H1AQ02539 215 aaPredicted RBP11.74□□□□□ -0.53
CCNF-201ENST00000293968 TM4SF20Q53R12 229 aa11.74□□□□□ -0.53
CCNF-201ENST00000293968 OTORQ9NRC9 128 aa11.74□□□□□ -0.53
CCNF-201ENST00000293968 KLF12Q9Y4X4 402 aa11.74□□□□□ -0.53
CCNF-201ENST00000293968 NCR2O95944 276 aa11.74□□□□□ -0.53
CCNF-201ENST00000293968 NMUP48645 174 aa11.74□□□□□ -0.53
CCNF-201ENST00000293968 DCHS1Q96JQ0 3298 aa11.74□□□□□ -0.53
CCNF-201ENST00000293968 IFI27P40305 119 aaPredicted RBP11.74□□□□□ -0.53
CCNF-201ENST00000293968 BSPH1Q075Z2 132 aa11.74□□□□□ -0.53
CCNF-201ENST00000293968 DEFB125Q8N687 156 aa11.74□□□□□ -0.53
CCNF-201ENST00000293968 PRSS22Q9GZN4 317 aa11.74□□□□□ -0.53
CCNF-201ENST00000293968 SCRT2Q9NQ03 307 aa11.74□□□□□ -0.53
CCNF-201ENST00000293968 F11RQ9Y624 299 aaKnown RBP11.74□□□□□ -0.53
CCNF-201ENST00000293968 TTC28Q96AY4 2481 aa11.73□□□□□ -0.53
CCNF-201ENST00000293968 TRAV8-6A0A0B4J262 113 aa11.73□□□□□ -0.53
CCNF-201ENST00000293968 GAGE12BA1L429 117 aa11.73□□□□□ -0.53
CCNF-201ENST00000293968 C19orf71A6NCJ1 209 aa11.73□□□□□ -0.53
CCNF-201ENST00000293968 FSTL3O95633 263 aa11.73□□□□□ -0.53
CCNF-201ENST00000293968 LGALS7P47929 136 aa11.73□□□□□ -0.53
CCNF-201ENST00000293968 MALRD1Q5VYJ5 2156 aa11.73□□□□□ -0.53
CCNF-201ENST00000293968 FCGR2BP31994 310 aaPredicted RBP11.73□□□□□ -0.53
CCNF-201ENST00000293968 NDFIP1Q9BT67 221 aa11.73□□□□□ -0.53
CCNF-201ENST00000293968 THYN1Q9P016 225 aa11.73□□□□□ -0.53
CCNF-201ENST00000293968 ZNF492Q9P255 531 aa11.73□□□□□ -0.53
CCNF-201ENST00000293968 PEF1Q9UBV8 284 aaKnown RBP11.73□□□□□ -0.53
CCNF-201ENST00000293968 ACACAQ13085 2346 aa11.73□□□□□ -0.53
CCNF-201ENST00000293968 FAM106CPP0CH98 169 aa11.73□□□□□ -0.53
CCNF-201ENST00000293968 FAM106AQ4KMX7 169 aa11.73□□□□□ -0.53
CCNF-201ENST00000293968 TEX36Q5VZQ5 186 aa11.73□□□□□ -0.53
CCNF-201ENST00000293968 SMIM15Q7Z3B0 74 aa11.73□□□□□ -0.53
CCNF-201ENST00000293968 RIF1Q5UIP0 2472 aaKnown RBP11.73□□□□□ -0.53
CCNF-201ENST00000293968 M0R296 226 aa11.72□□□□□ -0.53
CCNF-201ENST00000293968 IGFBPL1Q8WX77 278 aa11.72□□□□□ -0.53
CCNF-201ENST00000293968 RPEQ96AT9 228 aa11.72□□□□□ -0.53
CCNF-201ENST00000293968 CT83Q5H943 113 aa11.72□□□□□ -0.53
CCNF-201ENST00000293968 PIEZO2Q9H5I5 2752 aa11.72□□□□□ -0.53
CCNF-201ENST00000293968 IL4P05112 153 aa11.72□□□□□ -0.53
CCNF-201ENST00000293968 RIPPLY3P57055 190 aa11.72□□□□□ -0.53
CCNF-201ENST00000293968 ADIPOQQ15848 244 aa11.72□□□□□ -0.53
CCNF-201ENST00000293968 TMEM133Q9H2Q1 129 aa11.72□□□□□ -0.53
CCNF-201ENST00000293968 D6R8Y8 96 aa11.71□□□□□ -0.53
CCNF-201ENST00000293968 LYNX1G3V0Z9 82 aa11.71□□□□□ -0.53
CCNF-201ENST00000293968 H3BUT2 72 aa11.71□□□□□ -0.53
CCNF-201ENST00000293968 LYNX1P0DP58 116 aa11.71□□□□□ -0.53
CCNF-201ENST00000293968 CACNG7P62955 275 aa11.71□□□□□ -0.53
CCNF-201ENST00000293968 FOXE3Q13461 319 aa11.71□□□□□ -0.53
CCNF-201ENST00000293968 PSG8Q9UQ74 426 aa11.71□□□□□ -0.53
CCNF-201ENST00000293968 TMEM178BH3BS89 294 aa11.71□□□□□ -0.53
CCNF-201ENST00000293968 FTH1P19P0C7X4 201 aa11.71□□□□□ -0.53
CCNF-201ENST00000293968 TMEM97Q5BJF2 176 aa11.71□□□□□ -0.53
CCNF-201ENST00000293968 KLF17Q5JT82 389 aaPredicted RBP11.71□□□□□ -0.53
CCNF-201ENST00000293968 SCNM1Q9BWG6 230 aa11.71□□□□□ -0.53
CCNF-201ENST00000293968 GFRA4Q9GZZ7 299 aa11.71□□□□□ -0.53
CCNF-201ENST00000293968 LINC00574Q9H8X3 128 aa11.71□□□□□ -0.53
CCNF-201ENST00000293968 CTSZQ9UBR2 303 aa11.71□□□□□ -0.53
CCNF-201ENST00000293968 SPTA1P02549 2419 aa11.71□□□□□ -0.53
CCNF-201ENST00000293968 CFAP47Q6ZTR5 3102 aa11.71□□□□□ -0.53
CCNF-201ENST00000293968 TMEM213A2RRL7 107 aa11.71□□□□□ -0.54
CCNF-201ENST00000293968 VSTM5A8MXK1 200 aa11.71□□□□□ -0.54
CCNF-201ENST00000293968 C16orf97H3BN30 126 aa11.71□□□□□ -0.54
CCNF-201ENST00000293968 K7ERU9 68 aa11.71□□□□□ -0.54
CCNF-201ENST00000293968 HES1Q14469 280 aa11.71□□□□□ -0.54
CCNF-201ENST00000293968 NEU4Q8WWR8 484 aaPredicted RBP11.71□□□□□ -0.54
CCNF-201ENST00000293968 C18orf15Q96N68 181 aa11.71□□□□□ -0.54
CCNF-201ENST00000293968 CRXO43186 299 aaPredicted RBP11.71□□□□□ -0.54
CCNF-201ENST00000293968 CD5LO43866 347 aa11.71□□□□□ -0.54
CCNF-201ENST00000293968 IGHV1-8P0DP01 117 aa11.71□□□□□ -0.54
CCNF-201ENST00000293968 PPP1R27Q86WC6 154 aa11.71□□□□□ -0.54
CCNF-201ENST00000293968 SMIM12Q96EX1 92 aa11.71□□□□□ -0.54
CCNF-201ENST00000293968 NGBQ9NPG2 151 aa11.71□□□□□ -0.54
CCNF-201ENST00000293968 SMKR1H3BMG3 65 aa11.7□□□□□ -0.54
CCNF-201ENST00000293968 HAX1O00165 279 aa11.7□□□□□ -0.54
CCNF-201ENST00000293968 AMN1Q8IY45 258 aa11.7□□□□□ -0.54
CCNF-201ENST00000293968 C8orf49Q96NF6 230 aa11.7□□□□□ -0.54
CCNF-201ENST00000293968 MS4A6AQ9H2W1 248 aa11.7□□□□□ -0.54
CCNF-201ENST00000293968 SIGLEC9Q9Y336 463 aa11.7□□□□□ -0.54
CCNF-201ENST00000293968 IGHV3OR16-8A0A075B7F1 116 aa11.7□□□□□ -0.54
CCNF-201ENST00000293968 FAM231BA6NCW3 169 aa11.7□□□□□ -0.54
CCNF-201ENST00000293968 LOXL1Q08397 574 aaPredicted RBP11.7□□□□□ -0.54
CCNF-201ENST00000293968 PRELID3AQ96N28 172 aa11.7□□□□□ -0.54
CCNF-201ENST00000293968 ZNF747Q9BV97 191 aa11.7□□□□□ -0.54
CCNF-201ENST00000293968 RAI1Q7Z5J4 1906 aaPredicted RBP11.7□□□□□ -0.54
CCNF-201ENST00000293968 PLA2G2CQ5R387 149 aa11.7□□□□□ -0.54
CCNF-201ENST00000293968 PRSS57Q6UWY2 283 aa11.7□□□□□ -0.54
CCNF-201ENST00000293968 MEGF9Q9H1U4 602 aa11.7□□□□□ -0.54
CCNF-201ENST00000293968 TMEM189A5PLL7 270 aa11.69□□□□□ -0.54
CCNF-201ENST00000293968 FCN3O75636 299 aa11.69□□□□□ -0.54
CCNF-201ENST00000293968 LOXP28300 417 aaPredicted RBP11.69□□□□□ -0.54
CCNF-201ENST00000293968 BDP1A6H8Y1 2624 aa11.69□□□□□ -0.54
CCNF-201ENST00000293968 ANKRD39Q53RE8 183 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms