RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 RTL8CO15255 209 aa9.08□□□□□ -0.96
CD44-203ENST00000278386 INSP01308 110 aa9.08□□□□□ -0.96
CD44-203ENST00000278386 S100A5P33763 92 aa9.08□□□□□ -0.96
CD44-203ENST00000278386 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.08□□□□□ -0.96
CD44-203ENST00000278386 IGF2BP2-AS1Q96M15 143 aa9.08□□□□□ -0.96
CD44-203ENST00000278386 GPR82Q96P67 336 aa9.08□□□□□ -0.96
CD44-203ENST00000278386 STRAPQ9Y3F4 350 aaKnown RBP9.08□□□□□ -0.96
CD44-203ENST00000278386 V9GYH0 126 aa9.08□□□□□ -0.96
CD44-203ENST00000278386 SPINK13Q1W4C9 94 aa9.07□□□□□ -0.96
CD44-203ENST00000278386 LGALS9BQ3B8N2 356 aa9.07□□□□□ -0.96
CD44-203ENST00000278386 TMEM88Q6PEY1 159 aa9.07□□□□□ -0.96
CD44-203ENST00000278386 ZNF738Q8NE65 137 aa9.07□□□□□ -0.96
CD44-203ENST00000278386 DYNC1H1Q14204 4646 aaKnown RBP9.07□□□□□ -0.96
CD44-203ENST00000278386 H3BRN7 92 aa9.06□□□□□ -0.96
CD44-203ENST00000278386 M0R2Z0 102 aa9.06□□□□□ -0.96
CD44-203ENST00000278386 DUSP14O95147 198 aaKnown RBP9.06□□□□□ -0.96
CD44-203ENST00000278386 CNN1P51911 297 aaKnown RBP9.06□□□□□ -0.96
CD44-203ENST00000278386 RAP2BP61225 183 aa9.06□□□□□ -0.96
CD44-203ENST00000278386 OXA1LQ15070 435 aa9.06□□□□□ -0.96
CD44-203ENST00000278386 IGFL4Q6B9Z1 124 aa9.06□□□□□ -0.96
CD44-203ENST00000278386 AMTNQ6UX39 209 aa9.06□□□□□ -0.96
CD44-203ENST00000278386 TMEM182Q6ZP80 229 aaPredicted RBP9.06□□□□□ -0.96
CD44-203ENST00000278386 CYP2G1PQ6ZSU1 146 aa9.06□□□□□ -0.96
CD44-203ENST00000278386 RNF182Q8N6D2 247 aa9.06□□□□□ -0.96
CD44-203ENST00000278386 OR11H7Q8NGC8 314 aa9.06□□□□□ -0.96
CD44-203ENST00000278386 OR4D5Q8NGN0 318 aa9.06□□□□□ -0.96
CD44-203ENST00000278386 DEDD2Q8WXF8 326 aa9.06□□□□□ -0.96
CD44-203ENST00000278386 HIGD1AQ9Y241 93 aa9.06□□□□□ -0.96
CD44-203ENST00000278386 A8MTW9 85 aa9.05□□□□□ -0.96
CD44-203ENST00000278386 SSSCA1O60232 199 aa9.05□□□□□ -0.96
CD44-203ENST00000278386 ADAP1O75689 374 aa9.05□□□□□ -0.96
CD44-203ENST00000278386 IL5P05113 134 aa9.05□□□□□ -0.96
CD44-203ENST00000278386 INPP1P49441 399 aa9.05□□□□□ -0.96
CD44-203ENST00000278386 POLR2GP62487 172 aaKnown RBP eCLIP9.05□□□□□ -0.96
CD44-203ENST00000278386 SOHLH1Q5JUK2 328 aa9.05□□□□□ -0.96
CD44-203ENST00000278386 CCDC190Q86UF4 302 aa9.05□□□□□ -0.96
CD44-203ENST00000278386 BAP18Q8IXM2 172 aa9.05□□□□□ -0.96
CD44-203ENST00000278386 SLC25A39Q9BZJ4 359 aaPredicted RBP9.05□□□□□ -0.96
CD44-203ENST00000278386 PSENENQ9NZ42 101 aa9.05□□□□□ -0.96
CD44-203ENST00000278386 DNAH11Q96DT5 4516 aa9.05□□□□□ -0.96
CD44-203ENST00000278386 PKD1P98161 4303 aa9.04□□□□□ -0.96
CD44-203ENST00000278386 ZNF705GA8MUZ8 300 aaPredicted RBP9.04□□□□□ -0.96
CD44-203ENST00000278386 BOLA2-SMG1P6H3BVE0 249 aa9.04□□□□□ -0.96
CD44-203ENST00000278386 ZNF701M0R085 212 aaPredicted RBP9.04□□□□□ -0.96
CD44-203ENST00000278386 SCGB1D2O95969 90 aa9.04□□□□□ -0.96
CD44-203ENST00000278386 OR5G3P0C626 314 aa9.04□□□□□ -0.96
CD44-203ENST00000278386 LINC00869P0C866 280 aa9.04□□□□□ -0.96
CD44-203ENST00000278386 RPL7P18124 248 aaKnown RBP9.04□□□□□ -0.96
CD44-203ENST00000278386 UBE2MP61081 183 aaKnown RBP9.04□□□□□ -0.96
CD44-203ENST00000278386 RRAS2P62070 204 aaPredicted RBP9.04□□□□□ -0.96
CD44-203ENST00000278386 HIST1H1AQ02539 215 aaPredicted RBP9.04□□□□□ -0.96
CD44-203ENST00000278386 RNF212Q495C1 297 aa9.04□□□□□ -0.96
CD44-203ENST00000278386 TMEM144Q7Z5S9 345 aa9.04□□□□□ -0.96
CD44-203ENST00000278386 C15orf53Q8NAA6 179 aa9.04□□□□□ -0.96
CD44-203ENST00000278386 LRRC20Q8TCA0 184 aa9.04□□□□□ -0.96
CD44-203ENST00000278386 C17orf77Q96MU5 243 aa9.04□□□□□ -0.96
CD44-203ENST00000278386 ATG101Q9BSB4 218 aa9.04□□□□□ -0.96
CD44-203ENST00000278386 SHANK2-AS3Q9BTD1 123 aa9.04□□□□□ -0.96
CD44-203ENST00000278386 PPP1R14DQ9NXH3 145 aa9.04□□□□□ -0.96
CD44-203ENST00000278386 MUC4Q99102 2169 aa9.03□□□□□ -0.96
CD44-203ENST00000278386 TRAV12-2A0A075B6T6 113 aa9.03□□□□□ -0.96
CD44-203ENST00000278386 TRAV8-2A0A0B4J237 113 aa9.03□□□□□ -0.96
CD44-203ENST00000278386 C9orf170A2RU37 121 aa9.03□□□□□ -0.96
CD44-203ENST00000278386 LYRM9A8MSI8 78 aa9.03□□□□□ -0.96
CD44-203ENST00000278386 DEFB130BP0DP73 79 aa9.03□□□□□ -0.96
CD44-203ENST00000278386 DEFB130AP0DP74 79 aa9.03□□□□□ -0.96
CD44-203ENST00000278386 MED14OSP0DP75 135 aa9.03□□□□□ -0.96
CD44-203ENST00000278386 RHOBP62745 196 aa9.03□□□□□ -0.96
CD44-203ENST00000278386 TRIQKQ629K1 86 aa9.03□□□□□ -0.96
CD44-203ENST00000278386 Q6ZR54 194 aa9.03□□□□□ -0.96
CD44-203ENST00000278386 UHRF2Q96PU4 802 aa9.03□□□□□ -0.96
CD44-203ENST00000278386 CRXO43186 299 aaPredicted RBP9.02□□□□□ -0.97
CD44-203ENST00000278386 HYPMO75409 117 aa9.02□□□□□ -0.97
CD44-203ENST00000278386 PRM2P04554 102 aa9.02□□□□□ -0.97
CD44-203ENST00000278386 PRB4P10163 310 aaPredicted RBP9.02□□□□□ -0.97
CD44-203ENST00000278386 B2MP61769 119 aa9.02□□□□□ -0.97
CD44-203ENST00000278386 SPANXN2Q5MJ10 180 aa9.02□□□□□ -0.97
CD44-203ENST00000278386 S100A7AQ86SG5 101 aa9.02□□□□□ -0.97
CD44-203ENST00000278386 MGAT4CQ9UBM8 478 aa9.02□□□□□ -0.97
CD44-203ENST00000278386 F5H768 121 aa9.01□□□□□ -0.97
CD44-203ENST00000278386 CCNKO75909 580 aa9.01□□□□□ -0.97
CD44-203ENST00000278386 METTL15P1P0C7V9 234 aa9.01□□□□□ -0.97
CD44-203ENST00000278386 HTN1P15515 57 aa9.01□□□□□ -0.97
CD44-203ENST00000278386 RYR1P21817 5038 aa9.01□□□□□ -0.97
CD44-203ENST00000278386 SELENOTP62341 195 aa9.01□□□□□ -0.97
CD44-203ENST00000278386 DLK1P80370 383 aa9.01□□□□□ -0.97
CD44-203ENST00000278386 ID3Q02535 119 aa9.01□□□□□ -0.97
CD44-203ENST00000278386 C1orf134Q5TEV5 83 aa9.01□□□□□ -0.97
CD44-203ENST00000278386 OR8A1Q8NGG7 326 aa9.01□□□□□ -0.97
CD44-203ENST00000278386 SRRQ9GZT4 340 aa9.01□□□□□ -0.97
CD44-203ENST00000278386 ARL6Q9H0F7 186 aa9.01□□□□□ -0.97
CD44-203ENST00000278386 FLVCR2Q9UPI3 526 aa9.01□□□□□ -0.97
CD44-203ENST00000278386 A0A087X0K7 114 aa9□□□□□ -0.97
CD44-203ENST00000278386 LINC00854A0A1B0GVQ3 168 aa9□□□□□ -0.97
CD44-203ENST00000278386 NAP1L6A6NFF2 107 aa9□□□□□ -0.97
CD44-203ENST00000278386 NDUFB6O95139 128 aa9□□□□□ -0.97
CD44-203ENST00000278386 NUDT3O95989 172 aa9□□□□□ -0.97
CD44-203ENST00000278386 CXCL3P19876 107 aa9□□□□□ -0.97
CD44-203ENST00000278386 ANXA7P20073 488 aaKnown RBP9□□□□□ -0.97
CD44-203ENST00000278386 TSPOP30536 169 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms