RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 WDR86Q86TI4 376 aa12.61□□□□□ -0.39
CTDSP1-201ENST00000273062 FAM169BQ8N8A8 192 aa12.61□□□□□ -0.39
CTDSP1-201ENST00000273062 PRSS3P2Q8NHM4 247 aa12.61□□□□□ -0.39
CTDSP1-201ENST00000273062 PRELID3AQ96N28 172 aa12.61□□□□□ -0.39
CTDSP1-201ENST00000273062 TNFRSF18Q9Y5U5 241 aa12.61□□□□□ -0.39
CTDSP1-201ENST00000273062 SMCPP49901 116 aaPredicted RBP12.61□□□□□ -0.39
CTDSP1-201ENST00000273062 LGALS9BQ3B8N2 356 aa12.61□□□□□ -0.39
CTDSP1-201ENST00000273062 LGALS9CQ6DKI2 356 aa12.61□□□□□ -0.39
CTDSP1-201ENST00000273062 ZNF502Q8TBZ5 544 aa12.61□□□□□ -0.39
CTDSP1-201ENST00000273062 MGAQ8IWI9 3026 aa12.61□□□□□ -0.39
CTDSP1-201ENST00000273062 ITLN1Q8WWA0 313 aa12.6□□□□□ -0.39
CTDSP1-201ENST00000273062 FZR1Q9UM11 496 aa12.6□□□□□ -0.39
CTDSP1-201ENST00000273062 AKAP13Q12802 2813 aa12.6□□□□□ -0.39
CTDSP1-201ENST00000273062 PRR14LQ5THK1 2151 aa12.6□□□□□ -0.39
CTDSP1-201ENST00000273062 MOSP00540 346 aa12.6□□□□□ -0.39
CTDSP1-201ENST00000273062 SSBP2P81877 361 aaPredicted RBP12.6□□□□□ -0.39
CTDSP1-201ENST00000273062 Q6AWC8 147 aa12.6□□□□□ -0.39
CTDSP1-201ENST00000273062 RBPMS2Q6ZRY4 209 aaKnown RBP12.6□□□□□ -0.39
CTDSP1-201ENST00000273062 PRSS22Q9GZN4 317 aa12.6□□□□□ -0.39
CTDSP1-201ENST00000273062 TMEM140Q9NV12 185 aa12.6□□□□□ -0.39
CTDSP1-201ENST00000273062 FAM90A9PA6NNJ1 464 aa12.59□□□□□ -0.39
CTDSP1-201ENST00000273062 OVOL3O00110 214 aa12.59□□□□□ -0.39
CTDSP1-201ENST00000273062 LYZL6O75951 148 aa12.59□□□□□ -0.39
CTDSP1-201ENST00000273062 GNG3P63215 75 aa12.59□□□□□ -0.39
CTDSP1-201ENST00000273062 PLP2Q04941 152 aa12.59□□□□□ -0.39
CTDSP1-201ENST00000273062 PTH2Q96A98 100 aa12.59□□□□□ -0.39
CTDSP1-201ENST00000273062 TNCP24821 2201 aa12.59□□□□□ -0.39
CTDSP1-201ENST00000273062 CCDC179H3BU77 68 aa12.59□□□□□ -0.39
CTDSP1-201ENST00000273062 PLAUP00749 431 aa12.59□□□□□ -0.39
CTDSP1-201ENST00000273062 P01737 135 aa12.59□□□□□ -0.39
CTDSP1-201ENST00000273062 DIAPH2-AS1Q14236 149 aa12.59□□□□□ -0.39
CTDSP1-201ENST00000273062 WDR31Q8NA23 367 aa12.59□□□□□ -0.39
CTDSP1-201ENST00000273062 ZNF414Q96IQ9 312 aa12.59□□□□□ -0.39
CTDSP1-201ENST00000273062 RBP4P02753 201 aa12.58□□□□□ -0.39
CTDSP1-201ENST00000273062 PRB4P10163 310 aaPredicted RBP12.58□□□□□ -0.39
CTDSP1-201ENST00000273062 DCTN5Q9BTE1 182 aa12.58□□□□□ -0.39
CTDSP1-201ENST00000273062 SVILO95425 2214 aa12.58□□□□□ -0.4
CTDSP1-201ENST00000273062 RPL39P5Q59GN2 51 aa12.58□□□□□ -0.4
CTDSP1-201ENST00000273062 MBNL2Q5VZF2 373 aaKnown RBP12.58□□□□□ -0.4
CTDSP1-201ENST00000273062 ZNF562Q6V9R5 426 aa12.58□□□□□ -0.4
CTDSP1-201ENST00000273062 CEND1Q8N111 149 aa12.58□□□□□ -0.4
CTDSP1-201ENST00000273062 PTPRBP23467 1997 aa12.58□□□□□ -0.4
CTDSP1-201ENST00000273062 TRBV25-1A0A075B6N4 114 aa12.58□□□□□ -0.4
CTDSP1-201ENST00000273062 SRRM4A7MD48 611 aaKnown RBP12.58□□□□□ -0.4
CTDSP1-201ENST00000273062 IGHV1-2P23083 117 aa12.58□□□□□ -0.4
CTDSP1-201ENST00000273062 ERVK11-1P61568 191 aa12.58□□□□□ -0.4
CTDSP1-201ENST00000273062 DEFB109BQ30KR1 87 aa12.57□□□□□ -0.4
CTDSP1-201ENST00000273062 ALKBH6Q3KRA9 238 aa12.57□□□□□ -0.4
CTDSP1-201ENST00000273062 KIR2DL4Q99706 377 aa12.57□□□□□ -0.4
CTDSP1-201ENST00000273062 MLST8Q9BVC4 326 aa12.57□□□□□ -0.4
CTDSP1-201ENST00000273062 AGRNO00468 2067 aa12.57□□□□□ -0.4
CTDSP1-201ENST00000273062 C19orf71A6NCJ1 209 aa12.57□□□□□ -0.4
CTDSP1-201ENST00000273062 ARMS2P0C7Q2 107 aa12.57□□□□□ -0.4
CTDSP1-201ENST00000273062 TRBV20-1A0A075B6N2 111 aa12.56□□□□□ -0.4
CTDSP1-201ENST00000273062 hADV38S2A0JD32 116 aa12.56□□□□□ -0.4
CTDSP1-201ENST00000273062 RPRMLQ8N4K4 120 aa12.56□□□□□ -0.4
CTDSP1-201ENST00000273062 CNEP1R1Q8N9A8 125 aa12.56□□□□□ -0.4
CTDSP1-201ENST00000273062 OR10X1Q8NGY0 326 aa12.56□□□□□ -0.4
CTDSP1-201ENST00000273062 J3QT63 122 aa12.56□□□□□ -0.4
CTDSP1-201ENST00000273062 C12orf74Q32Q52 190 aa12.56□□□□□ -0.4
CTDSP1-201ENST00000273062 COQ2Q96H96 371 aa12.56□□□□□ -0.4
CTDSP1-201ENST00000273062 NPIPB5A8MRT5 1133 aa12.55□□□□□ -0.4
CTDSP1-201ENST00000273062 H3BTX0 84 aa12.55□□□□□ -0.4
CTDSP1-201ENST00000273062 WNT9BO14905 357 aa12.55□□□□□ -0.4
CTDSP1-201ENST00000273062 C1orf229Q6ZS94 237 aaPredicted RBP12.55□□□□□ -0.4
CTDSP1-201ENST00000273062 OR13A1Q8NGR1 328 aa12.55□□□□□ -0.4
CTDSP1-201ENST00000273062 ASCL2Q99929 193 aa12.55□□□□□ -0.4
CTDSP1-201ENST00000273062 PAXXQ9BUH6 204 aa12.55□□□□□ -0.4
CTDSP1-201ENST00000273062 SOX21Q9Y651 276 aaPredicted RBP12.55□□□□□ -0.4
CTDSP1-201ENST00000273062 TRGV8A0A0C4DH27 118 aa12.55□□□□□ -0.4
CTDSP1-201ENST00000273062 TMEM30CPA0ZSE6 113 aa12.55□□□□□ -0.4
CTDSP1-201ENST00000273062 SPTBN2O15020 2390 aa12.54□□□□□ -0.4
CTDSP1-201ENST00000273062 SLC25A5P05141 298 aaKnown RBP12.54□□□□□ -0.4
CTDSP1-201ENST00000273062 PRTN3P24158 256 aa12.54□□□□□ -0.4
CTDSP1-201ENST00000273062 UTF1Q5T230 341 aa12.54□□□□□ -0.4
CTDSP1-201ENST00000273062 SFTA2Q6UW10 78 aa12.54□□□□□ -0.4
CTDSP1-201ENST00000273062 C9orf106Q8NAJ2 232 aa12.54□□□□□ -0.4
CTDSP1-201ENST00000273062 CARD19Q96LW7 228 aa12.54□□□□□ -0.4
CTDSP1-201ENST00000273062 HARBI1Q96MB7 349 aa12.54□□□□□ -0.4
CTDSP1-201ENST00000273062 TRAV8-1A0A0A6YYK1 113 aa12.54□□□□□ -0.4
CTDSP1-201ENST00000273062 WI2-2373I1.2A0A1W2PRP0 233 aa12.54□□□□□ -0.4
CTDSP1-201ENST00000273062 C15orf61A6NNL5 157 aa12.54□□□□□ -0.4
CTDSP1-201ENST00000273062 HAX1O00165 279 aa12.54□□□□□ -0.4
CTDSP1-201ENST00000273062 ERVK-16P61578 105 aa12.54□□□□□ -0.4
CTDSP1-201ENST00000273062 TCF15Q12870 199 aa12.54□□□□□ -0.4
CTDSP1-201ENST00000273062 FXYD5Q96DB9 178 aa12.54□□□□□ -0.4
CTDSP1-201ENST00000273062 PKIBQ9C010 78 aa12.54□□□□□ -0.4
CTDSP1-201ENST00000273062 POLDIP2Q9Y2S7 368 aa12.54□□□□□ -0.4
CTDSP1-201ENST00000273062 DCHS1Q96JQ0 3298 aa12.53□□□□□ -0.4
CTDSP1-201ENST00000273062 CIARTQ8N365 385 aaPredicted RBP12.53□□□□□ -0.4
CTDSP1-201ENST00000273062 IFI27L1Q96BM0 104 aa12.53□□□□□ -0.4
CTDSP1-201ENST00000273062 HIGD1BQ9P298 99 aa12.53□□□□□ -0.4
CTDSP1-201ENST00000273062 EPDR1Q9UM22 224 aa12.53□□□□□ -0.4
CTDSP1-201ENST00000273062 OOEPA6NGQ2 149 aa12.53□□□□□ -0.4
CTDSP1-201ENST00000273062 IGHV3-48P01763 117 aa12.53□□□□□ -0.4
CTDSP1-201ENST00000273062 IGHG3P01860 377 aa12.53□□□□□ -0.4
CTDSP1-201ENST00000273062 RRN3P1Q2M238 152 aa12.53□□□□□ -0.4
CTDSP1-201ENST00000273062 CFAP126Q5VTH2 177 aa12.53□□□□□ -0.4
CTDSP1-201ENST00000273062 CXorf67Q86X51 503 aaPredicted RBP12.53□□□□□ -0.4
CTDSP1-201ENST00000273062 METRNQ9UJH8 293 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms