RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 FAM231DQ6ZW35 169 aa12.82□□□□□ -0.36
MAP1LC3B-201ENST00000268607 OR10AG1Q8NH19 301 aa12.82□□□□□ -0.36
MAP1LC3B-201ENST00000268607 NPFFR1Q9GZQ6 430 aa12.82□□□□□ -0.36
MAP1LC3B-201ENST00000268607 THYN1Q9P016 225 aa12.82□□□□□ -0.36
MAP1LC3B-201ENST00000268607 SMPXQ9UHP9 88 aa12.82□□□□□ -0.36
MAP1LC3B-201ENST00000268607 FOXA2Q9Y261 457 aaPredicted RBP12.82□□□□□ -0.36
MAP1LC3B-201ENST00000268607 HILPDAQ9Y5L2 63 aa12.82□□□□□ -0.36
MAP1LC3B-201ENST00000268607 MEF2CQ06413 473 aaPredicted RBP12.82□□□□□ -0.36
MAP1LC3B-201ENST00000268607 PET117Q6UWS5 81 aa12.82□□□□□ -0.36
MAP1LC3B-201ENST00000268607 RAB37Q96AX2 223 aa12.82□□□□□ -0.36
MAP1LC3B-201ENST00000268607 GAFA1Q96PS6 74 aa12.82□□□□□ -0.36
MAP1LC3B-201ENST00000268607 SLC25A2Q9BXI2 301 aa12.82□□□□□ -0.36
MAP1LC3B-201ENST00000268607 IDI2-AS1Q9NZ38 188 aa12.82□□□□□ -0.36
MAP1LC3B-201ENST00000268607 A0A1B0GV72 72 aa12.81□□□□□ -0.36
MAP1LC3B-201ENST00000268607 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.81□□□□□ -0.36
MAP1LC3B-201ENST00000268607 F2RL2O00254 374 aa12.81□□□□□ -0.36
MAP1LC3B-201ENST00000268607 GATA4P43694 442 aa12.81□□□□□ -0.36
MAP1LC3B-201ENST00000268607 ADIPOQQ15848 244 aa12.81□□□□□ -0.36
MAP1LC3B-201ENST00000268607 DDB2Q92466 427 aa12.81□□□□□ -0.36
MAP1LC3B-201ENST00000268607 PERPQ96FX8 193 aa12.81□□□□□ -0.36
MAP1LC3B-201ENST00000268607 A0A0G2JLM5 398 aa12.81□□□□□ -0.36
MAP1LC3B-201ENST00000268607 CGB3P0DN86 165 aa12.81□□□□□ -0.36
MAP1LC3B-201ENST00000268607 CGB7P0DN87 165 aa12.81□□□□□ -0.36
MAP1LC3B-201ENST00000268607 RTL8BQ17RB0 113 aa12.81□□□□□ -0.36
MAP1LC3B-201ENST00000268607 FAM167A-AS1Q96KT0 104 aa12.81□□□□□ -0.36
MAP1LC3B-201ENST00000268607 KBTBD11-OT1A0A1B0GTJ5 212 aa12.8□□□□□ -0.36
MAP1LC3B-201ENST00000268607 SAA2P0DJI9 122 aaPredicted RBP12.8□□□□□ -0.36
MAP1LC3B-201ENST00000268607 COX8AP10176 69 aa12.8□□□□□ -0.36
MAP1LC3B-201ENST00000268607 ZNF138P52744 262 aa12.8□□□□□ -0.36
MAP1LC3B-201ENST00000268607 MS4A6AQ9H2W1 248 aa12.8□□□□□ -0.36
MAP1LC3B-201ENST00000268607 A0A1B0GXF2 115 aa12.8□□□□□ -0.36
MAP1LC3B-201ENST00000268607 H3BRM9 83 aa12.8□□□□□ -0.36
MAP1LC3B-201ENST00000268607 GNG5P63218 68 aa12.8□□□□□ -0.36
MAP1LC3B-201ENST00000268607 CR1LQ2VPA4 569 aa12.8□□□□□ -0.36
MAP1LC3B-201ENST00000268607 C3orf36Q3SXR2 165 aa12.8□□□□□ -0.36
MAP1LC3B-201ENST00000268607 CCL17Q92583 94 aa12.8□□□□□ -0.36
MAP1LC3B-201ENST00000268607 SIGMAR1Q99720 223 aa12.8□□□□□ -0.36
MAP1LC3B-201ENST00000268607 MAP1LC3CQ9BXW4 147 aa12.8□□□□□ -0.36
MAP1LC3B-201ENST00000268607 DOPEY1Q5JWR5 2465 aa12.8□□□□□ -0.36
MAP1LC3B-201ENST00000268607 TEX48A0A1B0GUV7 120 aa12.79□□□□□ -0.36
MAP1LC3B-201ENST00000268607 C22orf46C9J442 243 aa12.79□□□□□ -0.36
MAP1LC3B-201ENST00000268607 PEX7O00628 323 aa12.79□□□□□ -0.36
MAP1LC3B-201ENST00000268607 FAM222BQ8WU58 562 aa12.79□□□□□ -0.36
MAP1LC3B-201ENST00000268607 ATP6V0BQ99437 205 aa12.79□□□□□ -0.36
MAP1LC3B-201ENST00000268607 FNDC10F2Z333 226 aa12.79□□□□□ -0.36
MAP1LC3B-201ENST00000268607 HBBP68871 147 aa12.79□□□□□ -0.36
MAP1LC3B-201ENST00000268607 ZNF329Q86UD4 541 aa12.79□□□□□ -0.36
MAP1LC3B-201ENST00000268607 H1FXQ92522 213 aaKnown RBP12.79□□□□□ -0.36
MAP1LC3B-201ENST00000268607 ZFHX3Q15911 3703 aa12.79□□□□□ -0.36
MAP1LC3B-201ENST00000268607 TANC2Q9HCD6 1990 aa12.79□□□□□ -0.36
MAP1LC3B-201ENST00000268607 KIR2DS2P43631 304 aa12.78□□□□□ -0.36
MAP1LC3B-201ENST00000268607 ZNF137PP52743 207 aa12.78□□□□□ -0.36
MAP1LC3B-201ENST00000268607 KIR3DS1Q14943 382 aa12.78□□□□□ -0.36
MAP1LC3B-201ENST00000268607 ZNF788Q6ZQV5 615 aa12.78□□□□□ -0.36
MAP1LC3B-201ENST00000268607 C19orf24Q9BVV8 132 aa12.78□□□□□ -0.36
MAP1LC3B-201ENST00000268607 SPCS1Q9Y6A9 102 aa12.78□□□□□ -0.36
MAP1LC3B-201ENST00000268607 ABCA12Q86UK0 2595 aa12.78□□□□□ -0.36
MAP1LC3B-201ENST00000268607 LY6HO94772 140 aa12.78□□□□□ -0.36
MAP1LC3B-201ENST00000268607 ATP5L2Q7Z4Y8 100 aa12.78□□□□□ -0.36
MAP1LC3B-201ENST00000268607 CHCHD1Q96BP2 118 aaKnown RBP12.78□□□□□ -0.36
MAP1LC3B-201ENST00000268607 TENM4Q6N022 2769 aa12.78□□□□□ -0.36
MAP1LC3B-201ENST00000268607 C17orf100A8MU93 164 aa12.77□□□□□ -0.36
MAP1LC3B-201ENST00000268607 E7EQL1 145 aa12.77□□□□□ -0.36
MAP1LC3B-201ENST00000268607 TCTAP57738 103 aa12.77□□□□□ -0.36
MAP1LC3B-201ENST00000268607 SCGB2A2Q13296 93 aa12.77□□□□□ -0.36
MAP1LC3B-201ENST00000268607 NUP37Q8NFH4 326 aa12.77□□□□□ -0.36
MAP1LC3B-201ENST00000268607 C7orf69Q9H7B7 122 aa12.77□□□□□ -0.36
MAP1LC3B-201ENST00000268607 A6NDN8 102 aa12.77□□□□□ -0.37
MAP1LC3B-201ENST00000268607 SHISA9B4DS77 424 aa12.77□□□□□ -0.37
MAP1LC3B-201ENST00000268607 C19orf84I3L1E1 186 aa12.77□□□□□ -0.37
MAP1LC3B-201ENST00000268607 ZNF207O43670 478 aaKnown RBP12.77□□□□□ -0.37
MAP1LC3B-201ENST00000268607 SCGB1A1P11684 91 aa12.77□□□□□ -0.37
MAP1LC3B-201ENST00000268607 CCL3L1P16619 93 aa12.77□□□□□ -0.37
MAP1LC3B-201ENST00000268607 RAB9AP51151 201 aa12.77□□□□□ -0.37
MAP1LC3B-201ENST00000268607 FAM162BQ5T6X4 162 aa12.77□□□□□ -0.37
MAP1LC3B-201ENST00000268607 OR10W1Q8NGF6 305 aa12.77□□□□□ -0.37
MAP1LC3B-201ENST00000268607 VSTM2AQ8TAG5 236 aa12.77□□□□□ -0.37
MAP1LC3B-201ENST00000268607 RABAC1Q9UI14 185 aa12.77□□□□□ -0.37
MAP1LC3B-201ENST00000268607 NBPF19A0A087WUL8 3843 aa12.77□□□□□ -0.37
MAP1LC3B-201ENST00000268607 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.76□□□□□ -0.37
MAP1LC3B-201ENST00000268607 LYNX1G3V0Z9 82 aa12.76□□□□□ -0.37
MAP1LC3B-201ENST00000268607 SMIM17P0DL12 118 aa12.76□□□□□ -0.37
MAP1LC3B-201ENST00000268607 LYNX1P0DP58 116 aa12.76□□□□□ -0.37
MAP1LC3B-201ENST00000268607 SSBP2P81877 361 aaPredicted RBP12.76□□□□□ -0.37
MAP1LC3B-201ENST00000268607 HSD52Q0P140 79 aa12.76□□□□□ -0.37
MAP1LC3B-201ENST00000268607 PGLYRP4Q96LB8 373 aa12.76□□□□□ -0.37
MAP1LC3B-201ENST00000268607 PAXXQ9BUH6 204 aa12.76□□□□□ -0.37
MAP1LC3B-201ENST00000268607 PSMB11A5LHX3 300 aa12.76□□□□□ -0.37
MAP1LC3B-201ENST00000268607 FCN3O75636 299 aa12.76□□□□□ -0.37
MAP1LC3B-201ENST00000268607 CEACAM3P40198 252 aa12.76□□□□□ -0.37
MAP1LC3B-201ENST00000268607 LINC00322Q6ZN03 302 aaPredicted RBP12.76□□□□□ -0.37
MAP1LC3B-201ENST00000268607 TEX45Q8NA69 505 aa12.76□□□□□ -0.37
MAP1LC3B-201ENST00000268607 TMEM116Q8NCL8 245 aa12.76□□□□□ -0.37
MAP1LC3B-201ENST00000268607 MRPL32Q9BYC8 188 aaKnown RBP12.76□□□□□ -0.37
MAP1LC3B-201ENST00000268607 LIPFP07098 398 aa12.75□□□□□ -0.37
MAP1LC3B-201ENST00000268607 PRCDQ00LT1 54 aa12.75□□□□□ -0.37
MAP1LC3B-201ENST00000268607 GTSF1Q8WW33 167 aa12.75□□□□□ -0.37
MAP1LC3B-201ENST00000268607 A0A1W2PPM0 123 aa12.75□□□□□ -0.37
MAP1LC3B-201ENST00000268607 FBLL1A6NHQ2 334 aaKnown RBP12.75□□□□□ -0.37
MAP1LC3B-201ENST00000268607 IGKV1-16P04430 117 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms